Coregonus clupeaformis (lake whitefish): 121582027
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Entry
121582027 CDS
T08357
Name
(RefSeq) LIM/homeobox protein Lhx2-like isoform X1
KO
K09373
LIM homeobox protein 2/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121582027
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
121582027
BRITE hierarchy
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121582027
NCBI-ProteinID:
XP_041753462
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Position
15:complement(15837732..15847313)
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AA seq
431 aa
AA seq
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MHGLNLRLMKVLACRSEGDACKCSPPASTMLFHGLPGGEMQGVIDEMDRRVKGESTAISS
AIDMGETEPSMTSINSDRVALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESEL
TCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTSCNKMLT
TGDHFGMRDSLVYCRLHFETLIQGEYQAHFNHAGNVASGKGLGESGTGNSLGMPYYNGVG
TGQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDSHYSSSSKSKRMRTSFKHHQL
RTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQESTGMDKVSD
GSTLPGGSPSGPHSELSNASMSPSSTHTALTDLTSPSIPSVNHVLTAVPGGMDPHDSMSM
SPSQTTLTSLF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggctaaatttgcgtctcatgaaagttttggcttgcagatctgagggagacgct
tgcaagtgtagccctcccgcctccacgatgctcttccacgggctccccggaggcgagatg
cagggggtcatcgacgagatggaccggagggtgaagggcgaatctaccgccatcagttcg
gctatagacatgggggaaactgagccgagtatgacgtccatcaacagcgaccgtgtggcc
ttgtgcgcgggatgcgggggaaagatatctgaccgctactacttgctcgcggtggacaaa
cagtggcacatgcgctgtctcaagtgctgcgagtgcaaactcaacctcgagtccgagctt
acctgttttagtaaagacggcagcatctattgcaaagaagattactacaggaggttttcc
gtccagaggtgcgcccggtgccatctcgggatatcggcgtcggagatggtcatgcgggcg
agggacttggtctaccacttgaactgtttcacctgtactagctgtaacaaaatgctcacg
actggagaccacttcggaatgcgggacagtcttgtgtactgccggctccactttgagaca
ctcatacaaggggaatatcaagcgcatttcaatcacgcggggaatgtagcctcgggcaaa
ggacttggcgagagcggcacgggcaactcgctggggatgccgtattacaacggcgtcggt
acgggacagaaaggaaggccgaggaaaaggaaaagtcccgggcctggagcagatctggcg
gcttacaacgcagcgttaagttgtaacgagaatgacggggaccacctggaccgagactcc
cactactcctccagctccaagtccaagcgtatgcgcacctccttcaaacaccaccagctg
aggaccatgaaatcctactttgccatcaaccacaatccggacgccaaggacctgaaacag
ttggcccagaagacaggtctcaccaaacgggtgctgcaggtttggttccaaaacgcccgg
gccaagtttagacggaacctcctacgtcaggagagcacagggatggacaaggtgtcggat
gggtccactctaccaggggggtcgccttcgggccctcactccgagctctccaacgcctca
atgagtccttccagcacccacaccgccctcacggacctgaccagcccctctattccgtcg
gttaaccatgtactgaccgccgtgccggggggcatggacccacacgactccatgagtatg
agtccttcccagaccacccttaccagcctcttctga
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