Coregonus clupeaformis (lake whitefish): 121582028
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Entry
121582028 CDS
T08357
Name
(RefSeq) DENN domain-containing protein 1A isoform X1
KO
K20160
DENN domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582028
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121582028
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
Motif
Other DBs
NCBI-GeneID:
121582028
NCBI-ProteinID:
XP_041753464
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All DBs
Position
15:15856593..16025032
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AA seq
1023 aa
AA seq
DB search
MGSRIKDNPEATFEVYLEVTHPGTAGSDPEVRRRFPEDYIDQETLQTVPKFCFPFSVDSL
SVSQVGQNFTFVLTDIESKQRFGFCRLSSGAHSCYCILSYLPWFEVFYKLLNILADYTIK
GQESQWRELLESLHTLPIPDPGVPVHLSVHSYFTVPDIRELPSIPENRNLTEYFVAVDVN
NMLHLYASMLYERRVLICCSKLSTLTACVHGSAAMMYPMYWQHVYIPVLPQHLIDYCCAP
MPYLIGVHSSLMEKVRGMALDDVVVLNVDTNTLETPFDDLQSLPNDVVSSLKNRLKKVST
TTGDGVARAFLKTQAALFGCYRNALQIQPGEPITFSEEVFVTHRSSAMRQFLQNAIQLQL
FKQFIDGRLDLLNAGEGFSDIFEDEINMGEYAGSDKNYHQWLFTVKKGGGAIFNTVRTKA
NPAMKTVYKFAKDHARMGIKEVKSRLKQKELAENGYSSTAGTGGTGTGTGEEGTTAESPT
SADGKDGSARTWDERRPITVHFGQARPPRPLVAKRPRSNVGLESSPEHCGRPTRHYTVFL
SEDSSGDELQHEDDSIAGFPENFLFSAPFEWSPLPPPYRSLKEAEEGEEPISGSSYTAPP
SPVMEKFADINLLGDMFSCLDEPEGQQLSLAKSLEDLRPPKDPQEQQKSTYQRMDLSGTL
PGLKHSNPYNKMWSMHGQDDMAVAGRVSPNWNRPLSVPPPDLEEPRPPSRESFGPGVPER
PDPFTTPSQGECITIPRPQGRKTPEPGKVLGAPPVPQPRTKPWAGVVGEGVTTTAGGQEF
RQALGMGGDLMLQPTKMDFNEGEDVDLLSLLDPLNNPAQTTTTPALAGEGADSRSSAAPP
SSRPVLPPRPYPQSLPPFHQHMPLNPFTPPLGYSTHRHYSPTVAGNPFGGGAYGPPTSTY
FHASPHGHPPHPLSRMPGLYRLSSPVGSTLPPGMGSMRPAFPNHGGPPPTTSGSHHALSN
LLDSPSAPTPSPAPRVLPKPPNTAEDSIETQDPFGDLLAMAKPAVAPPKKKVEDLRGKWE
TFD
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggtcccgtatcaaggacaacccagaggccacttttgaggtgtacctggaggttacc
catcctggaaccgctggctctgatccggaggtgcggaggcgattccccgaggactacatc
gaccaggaaactcttcagacagtccccaagttctgcttccccttcagtgtggacagtctg
tcggtgagccaagtgggccagaacttcacctttgtgctgacggacatcgagagcaagcag
cgctttggcttctgccgcctctcctcgggtgcccacagctgctactgcatcctcagctat
ctgccctggtttgaggtattctacaagctgctcaatatcctcgctgactacacaatcaaa
ggccaggagagtcagtggcgagagctcctggagtcactccacacactccccatccctgat
cctggagtgccagtccatcttagcgtgcattcctactttactgtgcctgacataagggaa
ctacccagcatacctgaaaacagaaacctaacagagtattttgtagccgtagatgtcaat
aacatgctccatctgtatgctagtatgctttatgagcgtcgagtcctcatctgctgtagc
aaactaagcaccttaacggcttgtgttcacgggtcggcggccatgatgtaccccatgtat
tggcaacacgtttacattcctgtcctgcctcagcaccttatagactactgctgtgcgccc
atgccctacctcattggagtacattccagcctaatggagaaggtgagggggatggccctg
gatgacgtggttgttctcaacgtagacaccaacaccctggaaacaccctttgacgacctc
caaagcctgcccaatgacgtggtgtcatccttaaagaatcgcctgaagaaggtttccacg
acgacgggagatggcgtggcccgagctttcctcaagacacaggccgctctcttcggctgc
tacaggaacgcgctgcagatccaaccgggagagccaatcacgttcagcgaggaggtcttc
gtgacccaccgctccagtgccatgagacagttcctgcagaacgccatccagctacagctc
ttcaaacagttcatcgatggccgcttggacctgctgaacgctggtgagggcttcagtgat
attttcgaggatgagatcaacatgggagagtatgcaggcagtgacaagaactaccaccag
tggctattcacagtaaagaaagggggcggtgctatctttaacacagtgaggaccaaggct
aatccggccatgaaaacagtctataaatttgctaaagatcatgccaggatggggataaag
gaggtcaagagccggctaaaacaaaaggagctagcagagaacggctactcctcgacagca
ggcactggtggcacaggaacgggaaccggggaggagggcactactgccgagtcgcctacc
tccgcagatggaaaggacggcagcgcccgcacctgggacgaacggcggcccatcactgtg
cactttgggcaggcccgtccacccaggcctctggtggccaagagacctcgcagcaacgtg
ggcctggagagcagccctgaacattgtggccgtcccacacgtcactacacagtctttctg
tccgaggactcatcaggcgacgagctgcagcacgaagacgactccatcgccggcttcccc
gagaactttctcttctccgcccctttcgaatggtctcccctgccgcctccttaccgctca
ctgaaggaggcggaggagggggaggagcccatcagcggctcctcctacacggccccgccc
agcccggtgatggagaagtttgctgacatcaacctgctgggggacatgttcagctgcttg
gacgagcccgagggacagcaactcagcctggccaagagtctggaggacctccgcccgccc
aaagacccccaggagcagcagaaatccacctaccagcggatggacctgagtggcaccctc
ccaggcctcaagcactccaacccctacaacaagatgtggagcatgcatgggcaggatgat
atggccgtggccggccgggtgtctccgaactggaaccgacccctgtccgtgcccccccct
gacctggaagagccacggccccctagccgagagagcttcggtcccggggtccccgagcgg
ccggatcccttcaccacccccagccaaggggagtgcatcaccatcccccgcccccagggg
aggaaaaccccagagccaggtaaggtcttgggtgcgccaccggttccccagccccggacc
aagccgtgggcgggggtggtgggggagggtgtgaccaccacagcaggggggcaggagttc
cggcaggcccttgggatggggggtgacctgatgctgcagcccaccaagatggacttcaat
gagggggaggatgtggacctgctcagcctcctggaccccctgaacaacccagcccagacc
accaccaccccagccttggcaggggaaggagcagactcccggtccagtgccgcccctcca
tcctccaggcctgttctccctccacggccctaccctcagagcctgccccccttccaccaa
cacatgcccctgaaccccttcaccccgcccctcggctactccacccatagacactactcg
cccacagtagcggggaatccttttggcggcggtgcctacgggcctcccacctccacctat
ttccacgcctccccccatggtcaccctcctcaccctctctctagaatgccggggctctac
agactgtcgtcccccgtggggtccaccctccctcctggcatgggctccatgcggcctgcc
tttcccaatcatggcggtcctccccccaccacctcaggcagccaccacgctctctccaac
ctgttggactccccttcggcccccacccctagccccgcccctagggtactgccaaagcct
cccaacactgcagaggactccatcgagactcaggacccctttggagacctactggccatg
gccaagccggccgttgcaccacctaaaaagaaggtggaggaccttcgggggaagtgggag
acttttgactaa
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