Coregonus clupeaformis (lake whitefish): 121582030
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Entry
121582030 CDS
T08357
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121582030 (cdk9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121582030 (cdk9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121582030 (cdk9)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
121582030 (cdk9)
2.7.11.23 [RNA-polymerase]-subunit kinase
121582030 (cdk9)
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: CMGC group
CDK family
121582030 (cdk9)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
121582030 (cdk9)
Brd4/P-TEFb complex
121582030 (cdk9)
7SK RNP complex
121582030 (cdk9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
RIO1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
121582030
NCBI-ProteinID:
XP_041753469
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All DBs
Position
15:complement(16089723..16093993)
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AA seq
393 aa
AA seq
DB search
MQRDKTGNAAGAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKDR
LKAYVKDPYALDLIDKLLVLDPAQRTDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEY
LAPPRRRGHMPQQPANQNRNPATTSQTEFDRVF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagacaaaaccggaaacgccgccggggctgaaaagcctgaccgggaggccgcc
attatgtccaaatactacgacggagtcgaattccctttctgtgatgaattttctaaatat
gaaaaacttgccaagatcggccaagggacctttggggaggtgttcaaagccaagcacaga
cagactgggaagaaggtagcactgaagaaagtgttgatggagaatgagaaagaagggttc
cccatcactgctttgagagagatcaagattctgcagctcttgaaacacgagaatgttgtc
aacctcatagagatctgtcgaaccaaagccacccagtttaaccgctacaaaggaagcatc
tacctggtgtttgacttctgtgagcacgacctggcagggttgctaagcaacgccaatgtg
aaattcaccctggccgagatcaagaaggtgatgcagatgctgctgaatggactctactat
atccacagaaacaagatcttacacagagacatgaaggcggctaacgtgctcatcacccga
gacggcgtgctgaagctggccgactttgggctggcgcgagccttcagcctggccaagaac
agccagggcaaccgctacaccaaccgtgtggtcacactctggtacaggcccccagagctg
ctgctaggtgagagagattacgggcctcccattgacctgtggggtgcgggctgcatcatg
gcggagatgtggacacgcagtcccatcatgcaaggcaacacagagcagcaccagctcaca
ctcatcagtcagctgtgtggctctatcacggcagaggtatggccaggcgtggacaagaag
tacgagctttaccagaagatggagctccctaagggccagaagaggaaggtgaaggaccgc
cttaaggcctacgtcaaggacccatacgccctggacctgattgacaagctcctagtctta
gacccggcgcagaggacggacagtgacgacgctttgaaccacgacttcttctggtcggac
cccatgccctcggacctgaagaacatgctctccacgcacaacacgtccatgtttgagtac
ctggccccgccccgccggagaggtcacatgccccagcagccggccaatcagaacaggaac
ccggccacaacgagtcagactgagtttgaccgggtgttttga
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