Coregonus clupeaformis (lake whitefish): 121582039
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Entry
121582039 CDS
T08357
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582039 (lrsam1)
04121 Ubiquitin system [BR:
cclu04121
]
121582039 (lrsam1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121582039 (lrsam1)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
121582039 (lrsam1)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121582039 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
zf-C3HC4_3
LRR_4
LRR_1
SAM_1
SAM_2
Prok-RING_4
LRR_LRWD1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121582039
NCBI-ProteinID:
XP_041753482
LinkDB
All DBs
Position
15:7000693..7019489
Genome browser
AA seq
727 aa
AA seq
DB search
MPLFFRKRKPSEDSKKRLEYQLCLSKEVGAGDILDISACELTEVPTSAFSICKVLQKKVF
ILHGNQLKSMVPKGCCINFLVTLKVLDLHENKLTSLPDDIGQLASLQVLNIENNQIKTLP
DSIGDLRLLQTLNVKGNCLSQLPSSVGRMSSLRTLDLSENSVRELPRDLALARTLESLTL
DAALMSYPPASVCTTGTEDIQRFLCTELGEEYCPPSQFLLPVLESDSGKQSSDNVDSLEV
AWQSKFNDLEKRKEQKHQEKLAFERQLEEKQKEHHQLLLMNNSHKENILLSVRQEQERLE
LGVSVQQRFQEVERQRILGKVRQAETGIASRISNLLLDSKRQRKSAEFLQQLEEDRIRME
QLTAITQEETNSLRKREVAVAMQKMLSESCSMRLMQEASDSRRQSLVTEACRSLESQDRK
FDQVLSLQQLDKSKAIACILQEEEMQKAAFQALQLQKDSVHGYIQQQIRLIEGELMQLTK
LEVKRHNLDAENLQEMLWEQRSALSDLLQQLLKEKDQREVELRQVLQEMELKSDSNQQNY
WLIQYQRLLDAKPLSLRMQEAGVESDLVNLLCKLSAQHYLPILAHHRVTSEALRHMTTKD
LCKLGINETGIQKALLNWAREQAFTPPEGACKADPQEEEAVPSPSSPPSAPFETPTSTPP
LTPVNPSAPSPIDSPGSSECVVCMETESQVIFLPCGHVCCCQMCSDALQTCPLCRSNIAQ
HIRLYHG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcttcagaaagaggaagcccagtgaggactccaagaagcgtctggagtat
caactgtgcctgtctaaagaggtaggggctggtgacattctggacatctccgcttgtgag
ctcacagaggttccaaccagtgcattctccatatgcaaggtgctacagaagaaggtcttc
attctccatggaaaccagctgaagtccatggtgcccaaaggctgttgcatcaactttctg
gtcacattaaaggtgttggatttgcacgagaacaagctgacctccctccctgatgacata
gggcaactggcatccctgcaggtgctgaatatagaaaataaccagatcaagaccctgccg
gactccattggggatctcagacttctgcagaccctcaatgtgaaaggtaattgtctaagt
cagctgccttcctctgtgggccgtatgagcagcctgcgcacacttgacctaagtgagaac
agtgtgagggagttaccccgggacctggcactggcacgcactctagagagcctgaccctg
gacgctgctctgatgtcctacccccctgcctcggtgtgtaccacggggactgaggacatc
caacgcttcctctgcactgagctgggggaggagtactgccccccgtctcagttcctgctg
cccgtgctggagagtgactcagggaagcagagctcggacaatgtggacagcctggaggtg
gcctggcagagtaagttcaatgacttggagaagagaaaggagcagaagcaccaggagaaa
ctggcatttgagcgtcagctggaggagaagcagaaggagcaccaccagctcctcctcatg
aacaactcccacaaggagaacatcctgctgtctgtcagacaggaacaggagcgtctggag
ctaggcgtgtcggtgcagcagaggttccaggaggttgagaggcagaggattctgggtaag
gtccgccaggccgagacgggcatcgctagccgcatcagcaacctgctactggacagcaaa
cgacaaagaaagagtgcagagtttctccaacagttggaggaggaccggatacggatggag
caactgacggccatcacacaagaagagacaaactcactcaggaagagagaagtagcagtg
gccatgcagaagatgttgtcagagagctgctccatgcgtctgatgcaagaagccagtgac
tcacgcagacagagcctggtcactgaggcctgcaggagtctggagagtcaggacaggaag
ttcgatcaggtgctttcgctccagcagctagacaaatccaaagccatcgcttgtatccta
caggaggaggagatgcagaaggcagccttccaggcactgcagctgcagaaggacagtgtg
catggctacatccaacaacagatcaggctaatagaaggagagttaatgcagctgactaaa
ctggaggttaagagacacaatctggacgctgagaacctgcaggagatgctgtgggagcag
cgttcggccctcagtgacctgctgcagcagttgctgaaggagaaggaccagagagaggtt
gagctgagacaggtcctccaggagatggagctgaagagtgactccaaccagcagaactac
tggctgatccagtaccagaggctgctggacgctaagcctctgtcgctacgcatgcaggag
gctggtgtggagagtgacctggtcaatctgctgtgtaagctttcagctcagcactacctc
cccatcctggcccaccacagagtcacctccgaggcccttcgccacatgaccaccaaagac
ctctgcaagctgggaatcaatgagacgggtatccagaaggctcttctcaactgggccagg
gagcaggccttcacaccacctgaaggggcctgcaaggccgatccacaggaagaggaagct
gtcccgtcaccatcttctccgcccagcgcccccttcgagacacccacctccacccctccg
ctgacccccgtcaatccctcagcccccagccccatagacagcccgggcagctcagagtgt
gtggtgtgcatggagacagagtctcaggtcatcttcctgccctgtggccacgtgtgctgt
tgccagatgtgcagtgatgccctccagacctgccccctgtgtcgcagcaacatcgcccag
cacatacgcctctaccacggctaa
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