Coregonus clupeaformis (lake whitefish): 121582059
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Entry
121582059 CDS
T08357
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121582059
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121582059
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
HEAT_EZ
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
121582059
NCBI-ProteinID:
XP_041753511
LinkDB
All DBs
Position
15:6377001..6399799
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AA seq
771 aa
AA seq
DB search
MAAKAGDNPDSLMALSTAFCLRNLRRTMCYLGEGNKLCLRSDVFLPSEICDKLVNTYMEL
VHSDSNFEPQDGFFQLFSDPRSTRLTRVQLREDLVRDMDLEAIGKQDLIELHLTYCNSLS
ARSLKTLASFRQTLVSLSLFGCSHIFYRKGGAPLACNEDDEEEAERPASRQALDTDFSFQ
GFNRLRLLNLGGLPEEVDPEALLKPLPALNSLDLSGVQLPRAAFLAQWKERLASLVLYNV
DLSEELVNTVVELGHLRHLDISRERTSKFKMTRKILTAIVQGLVNLVSLDISGHIMLDNC
TVPHLEEAMGRPSIEPCKSSIYPFQELKRPLQFLGLYNTTLCNVTHIPAYKVTGSKNEDQ
VLNAIEAYTEFRPELAHRAINQLFDIARIQHCSQLLRALQLVIAALKCHKYEKSVQVTGS
AALFYLTNTEYRSDQSMRLRRQVIQVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELEFQY
SRVNLLLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQKKL
QDRTCDQVMEFSWSALWNITDETPDNCQMFLNCRGMSLFLDCLKEFPDKQELHRNMLGLL
GNVAEVRALRPQLLTPQFISVFSDLLDSKADGIEVSYNACGVLSHIVFDGPEAWGMEEPL
RDTVMDKMMAAIQSWDVTSRRNINYRSFEPILRLLPQSIAPVSQHWATWALFNLVSVYPS
KYCPLLVKEGGIVLLEKVLQLQTSHEETKDMARKVMEQCENFKEDPMETAR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagcaggggacaacccagacagcctcatggctctgtccacggccttctgc
ctaaggaacctgaggaggaccatgtgctacctgggagaagggaacaagctctgcctgcgc
tcagatgtcttcctgcccagcgagatctgtgacaagctggtcaacacatacatggagctg
gtacattcggacagtaactttgagccgcaggacggcttcttccagctgttctcggacccg
cgcagcaccaggctcaccagggtgcagctgagggaggaccttgtgcgggacatggacctg
gaggccattgggaaacaggacttgatagagctccacctcacctactgcaacagcctatca
gcgcgcagcctaaagactctggccagcttccgccagaccctggtctccctcagcctgttc
ggctgcagccacatcttctaccgcaagggtggcgctccgctggcgtgcaacgaggacgac
gaggaagaggcggagcggccggcctccagacaggcgctggacacagacttcagcttccag
ggcttcaaccggctgcggctgctcaacctggggggtctgcctgaagaggtggaccccgag
gccctgctcaagcccctgccggccctcaactctctggacctgtccggggtgcagctgccc
agggctgccttcctggcccagtggaaggagaggctggcctcgctggtgctttacaacgtg
gacctgtcagaggagctggtcaacacagtggtggagctgggacacctcaggcacctggat
atctcccgagagcgcacctccaagttcaaaatgacccgtaagatcctgacggccatcgtg
cagggcctggtcaacctggtgtcattggacatctcaggccacatcatgctggacaactgc
acagtcccacacctggaggaggccatgggacgtccaagcattgagccctgcaagagcagc
atctaccctttccaggagctgaagaggcctctgcagtttctggggctctacaacaccacc
ctttgtaatgtgacgcacatccctgcgtacaaggtcacaggctccaagaatgaagaccag
gtcctgaatgccatcgaggcctacacagagttccgcccggagttggcccaccgagcaatc
aaccagctgtttgacatcgccaggatacagcactgcagccagctactgcgggcacttcag
ctggtgattgctgcgctgaagtgccataagtacgaaaagagcgtccaggtgacaggcagc
gcggccctcttctacctgaccaacactgagtaccgcagtgaccagagcatgaggctacgc
cggcaggtcatccaggtggtgctcaacggcatggagcagtaccaagaggtcacggtccag
aggaactgctgcctgacgctgtgtaacttcagcatccccgaggagctggagttccagtac
agccgggtcaacctgctgctgctgaagatcctggagccggcccggcaggacgagtccatc
cagcgcattgccgtgcacctctgcaacgccctggtctgccaagtggacaaccaccacaag
gaggctgtgggcaagatgggcttcgtcaagacaatgttgaatctgatacagaaaaagcta
caggacaggacgtgtgaccaggtgatggagttctcctggagcgcgctgtggaacatcact
gacgagacgccagacaactgtcagatgttcctcaactgtaggggcatgagcctcttcctg
gactgcctgaaggagtttccagacaagcaggagctccaccgtaacatgctggggctgctg
ggtaatgtggcagaagtgagggctctgcggccacaactcctcaccccacagttcatctct
gtcttcagtgacctgctggacagcaaggcggatgggatcgaggtgtcctataacgcgtgt
ggggtgctgtcccacatcgtgtttgatgggccagaggcatggggcatggaggagccactg
agggacacggtcatggacaagatgatggctgctatccagagctgggatgtcacctcccgc
cggaatatcaactacagatcctttgagcctatcctgcgcctgctgccccagagcattgcc
ccagtcagtcagcactgggccacatgggcactcttcaacctggtgtcagtctacccgagt
aagtactgccctctgctggtaaaggaaggagggatcgttctcctggagaaggtgctgcag
ctccagacatcacacgaagagaccaaggacatggcgcggaaagtgatggagcagtgtgag
aacttcaaagaagaccccatggaaacggcgaggtag
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