Coregonus clupeaformis (lake whitefish): 121582088
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Entry
121582088 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121582088
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121582088
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Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_At5g56370
Sp-CxC
LRR_EndoS
LRR_6
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
121582088
NCBI-ProteinID:
XP_041753573
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Position
15:4837995..4860974
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AA seq
795 aa
AA seq
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MIPITELRYFVDTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
VNKSCEYLNVSFPDPFAPEPKGIQYELDRHQYNYIDAVCYENKLHWFAKYFPYLVLLHTL
IFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPLGKMNGLVD
KKASCVSEDVEASIPMLQRTKSRIEQGIVDRSDTGVLDKKEGEQAKALFEKVKKFRMHVE
EGDIVYRLYIRQTIIKVLKFILIICYTAYYVHYIKFSVICMVDIEKLTGYRMYHCAHPLA
TLFKILACFYISLVGIYGLICMYTLCWMLSRSLKRYSFESIREESHYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITKNSQEKLELHLFML
IGIPDTVFDLIELEVLKLELIPDVTIPPIIAQLVSLREMWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRFIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGVHLQKLSINNEGTKLMVLNSLKKMMNLTELELLRCDLERIPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVSLKLWYNQIAYIPIQIGTLTNMERLYLNRNKIE
KIPGQLFYCRKLRFLDLSHNNLTSIHADVGFLQNLQYFAVTANRIESLPPELFQCKKLRT
LNLGNNCLHTLPSRFGELTGLTQLELRGNRLECLPVELGECRQLKRSGLVVEEDLFKTLP
TEVKEQLWRADKEPV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcacagagctccggtactttgttgacacccagccggcgtaccgcatcctg
aagccatggtgggacgtcttcacagactacatatccattgtcatgctcatgatcgccgtg
tttgggggcacgctgcaggtcacccaggacaagatgatctgcctgccctgcaagtgggtg
gtcaacaagtcttgcgagtacctcaatgtgagcttcccagacccatttgcccctgagccc
aaaggcatccaatatgaactcgaccggcaccagtacaactacattgacgcggtctgctac
gagaacaagctgcactggttcgccaagtacttcccctacctggtgctactgcacaccctc
atcttcctggcctgcagtaacttctggttcaagttcccccggactagctccaaattggag
cactttgtgtccatcctgctcaagtgttttgactcgccctggaccaccagggctctgtcc
gagacggtagtggaggagagtgaccccaagcccctggggaaaatgaacggtttggtggac
aagaaggcatcttgtgtcagcgaggatgtggaggccagcattcccatgctccaaaggact
aagtcccgcatcgagcagggcatcgtggaccgctccgacaccggcgtcctggacaagaag
gaaggcgagcaggccaaagctctgttcgagaaggtgaagaagttccggatgcacgtcgaa
gaaggggacatcgtttaccggctctacatccgccagaccatcatcaaagtcctcaagttc
atcctgatcatctgctacacggcctactatgtgcactacatcaagttcagtgttatctgc
atggtggacattgagaagctgacaggctataggatgtaccactgtgctcacccccttgcc
accctcttcaagatcctggcctgtttctatatcagcctggtggggatttacggtctcatc
tgcatgtacaccctctgctggatgctcagccgctccctcaagcgctactcttttgagtcg
atccgtgaggagagccactacagcgacatacccgatgtgaagaacgactttgccttcatg
ctgcacatgatcgaccagtatgacccgctctactccaagcgctttgccgttttcctatcg
gaggtgagtgagaacaaactgcgtcagctgaacctcaacaatgagtggacgctggacaag
ctgaggcaacgcatcaccaagaactcccaggagaaactggagctgcacctgttcatgctt
atcggaatccctgacacagtgtttgacctcatagaactggaggtgctcaagctggagctc
atccccgatgtcaccatcccccccatcattgcccagctggtcagcctgagagagatgtgg
ctctaccacacaccggctaaaattgaggccccagctttggccttcctgagggagaacctc
aagtccctccacatcaagttcacagacatcaaggagatccctctgtggatctacagcctg
aagaacctgagcgagctgcacctcacagggaacctgagcgcagagaacaaccgcttcatc
gtaatcgacgggctacgggagctcaagaggctcaaagtgctccgtctgaagagcaacctg
accaagctgcctcaggtggtgacagacgtcggggtccacctccaaaagctgtccatcaac
aacgagggcaccaagctgatggtgctcaacagcctgaagaagatgatgaacctgacagag
ctggagctgttacgctgcgacctggaacgaatcccgcactccatcttcagcctgcacaac
ctgcaagagatcgacctgaaggacaacaatctcaagaccatcgaggagatcatcagcttc
cagcacctgcaccggctggtaagcctgaagctatggtacaaccagattgcctacatcccc
atccagatcggcaccttgacgaacatggagaggctctacctaaaccgcaacaagatcgag
aagatcccgggccagctcttctactgccgcaaactgcgcttcctggacctgagtcacaac
aacctgaccagtatacatgccgacgtgggcttcctccagaacctgcagtactttgctgtg
acggccaacaggatcgagtcgctcccaccggagctgttccagtgcaagaagctgcgcacc
ctgaacctgggcaacaactgcctgcatactctaccgtcacgctttggagagctgacgggc
ctgacccagctggagctgcgggggaaccgtctggagtgcctgcccgtggagctgggggag
tgcaggcagctgaagaggagcggcctggtggtggaggaggacctgttcaagacactgccc
acagaggtcaaagagcagctgtggagggccgacaaggagccggtctga
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