Coregonus clupeaformis (lake whitefish): 121582093
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Entry
121582093 CDS
T08357
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121582093 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121582093 (rapgef1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
DUF676
Motif
Other DBs
NCBI-GeneID:
121582093
NCBI-ProteinID:
XP_041753578
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All DBs
Position
15:4688394..4765986
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AA seq
1220 aa
AA seq
DB search
MSGKIESKQDSQRSHLSFTMKLMDKFHSPKIKRTPSKKGKQLQVEPAVKSQEKPVNKKVS
RLEEQEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARITHSSAV
SSCHNRVYQSLANLIRWSDHVMLDGIDLDDKDNVVAVTTVIKAVLDGVKELVKLTIEKQE
QPSPTTPNKPPPPPVTTPERSELPLTEREREILSKTPPTEAVKDMAEEDIAPPKPPLPGL
KMDALRAHLATDRSVAGQRRSTKTDTPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLPCS
VHRQQQDYEQEFLQRRFSGGSQSYGCDSPRLSPYSSMGKLSRSEEQLCSMEQDSGQCSRN
TSCETLDNTEGYDPDYDFLHQDLAVFTGDPHLPSTAAPSGVTSLSPLPESHSECPSPVPP
HPRFRSPPVPPHHQQPHPPHSEHWTPVIPLLPSRVSAPPALPQKKRRSSQVSPYQDGCGS
SGGPFNERSPSQYDNLSEEELLHPTPPFPLFMPNSPMPQSNGGVFVAQHQANENADVPSS
PPPLPEKRNKHVLAYMQFVEDYSEPQPSVFYQTPQNESIYQQRNKRFQDVYGLNDSFSST
DSVHEPLPIPLFPPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSLVAAAEEAGSGLGL
SLSVSSSSYLSGHASLTTPMSSDQVALTNATILDGSMGRPDGSLADSLGSVAVCLPPSET
TSLLTDSLLHTSAVSVDEGGEGEYVNLYSSSQANGELELPPCLRPIAADDVIQDPAPQMP
SSNSKEALDKDSRRQKSTDSVQSDEEEVDELSLIDHKEIMSRITLKQENDDGPDVRAGSG
DILLVHATETDRKDLVLYCEVFLTTYRTFISPEDLIKKLHYRYTRFCHSPDTFKKRVSKN
TFFVLVRVVDELCLVELTEDILKQLMDLVFRLVCNGELSLARVLRKNILDKVEQKKLLRC
TNSLKPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSP
NLTQFTEHFNNMSYWVRSLIIQQEKGQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALD
SAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQDLTFVHL
GNPDLIDGKVNFSKRWQQFNILDSMRRFQQVHYELKRNDDIVCFFNDFSDHLAEEALWEL
SLKIKPRNITRRRTEREEKT
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaagcaagactcgcagcgctcccacctctccttcaccatg
aagctgatggacaagttccactcacccaagatcaagaggacgccatcgaagaagggcaag
cagctgcaggtcgagccagcggtcaagagccaagagaaacctgtcaacaagaaggtgagt
cggctggaggagcaggagaaggaggtggtgagtgctctgcgttacttcaagaccatcgtg
gacaagatggtggtggagaagaaggtgctggagatgctgcctggctcggccagcaaggtg
ctggaggccattctacccctggtgcaggtggaggcccggataacacacagttcggctgtg
tcgtcgtgtcacaaccgggtgtaccagagccttgccaacctgatccgctggtccgaccac
gtcatgctggacggcatcgacctggatgacaaggacaacgtggtcgcggtcacgactgtc
atcaaggccgtcctggatggggtcaaggagctggtcaaactcaccatagagaaacaggag
caaccctcgcccaccacaccgaacaaaccaccaccgccgcctgtcactaccccagagagg
tcagagttgccactgacagaacgggagagagagatcctgagtaaaaccccgcccaccgag
gctgtgaaggacatggcagaggaggacatagccccgcccaaaccccccctccctggcctg
aagatggatgcgctcagagcacacttggctactgaccgctctgtcgctggccaaaggaga
tccacaaagactgacactccacctccagccctgcccccaaagaagcgtcagtcggccccg
tcgcccacccgggtggcagtggtggcccccatgagccgtggctccagcctgccctgcagc
gtccacagacagcagcaggactatgagcaggagttcctccagaggcgtttctcggggggc
agccagtcatacgggtgcgactccccgcgcctctcgccctacagcagcatggggaagctc
agcaggtctgaagagcagctctgctccatggaacaggacagtggacagtgctccagaaat
actagctgtgagacactggacaacacagagggttacgaccccgactacgacttcctccac
caggacctcgctgtcttcacaggggacccccacctgccctccaccgccgccccctcaggg
gtcacgtccctgtcccccctccctgagtcccacagcgagtgcccctcccccgtccctcct
cacccccggttcaggtccccacccgtccccccccaccaccaacaaccccacccaccccat
tccgagcactggacccccgtcatccccttgctaccatcccgcgtcagtgctcctccagcg
ttaccccagaagaagcgacgcagctcccaggtttcgccctatcaggacggttgtggctcc
tcgggggggcccttcaacgagaggtccccctcccaatacgataacctgtcagaggaggag
ctgctgcaccccacgccccccttccccctcttcatgcccaattcgcccatgccccagagc
aacgggggggtgttcgtggcccagcaccaggctaacgagaacgccgacgtgccctccagt
ccaccgccgctgcctgagaagaggaacaagcacgtcctggcgtacatgcagtttgtggag
gactactcggagccccaaccctcagtgttctaccagaccccacagaatgagagcatctac
cagcagaggaacaaacgcttccaggacgtctacggcctcaacgactccttcagcagcact
gactcggtccacgagccccttcccatacccctcttcccaccccccgccctgccccccaag
cagaggcagctggcctcccactcttcctccccttcttcctcctcatcctcctctctgtcg
tgccacctccagccgtcattggtggcggcggcggaggaggcgggctctggcctaggcctc
agcctatcggtttctagctcctcctacctgagtggacacgcctcattaaccacacccatg
agttcagaccaggtcgccttgaccaatgccaccatattggatggcagcatgggcaggccc
gacggttccctggccgactcattgggctctgtggctgtctgtcttcctccttctgagacc
acttctcttctaactgattctctcctccacacctcagcagtgagcgtggacgagggtggc
gaaggcgagtatgtcaacctgtactcatccagccaggccaatggggagctggagctgcct
ccctgcctcagaccaatcgctgctgacgatgtcattcaagaccccgccccacagatgccc
tcctccaatagcaaggaggctctggacaaggacagcaggaggcagaagtcgacagactcg
gtccagagcgatgaggaggaagtggatgagctctctctcatcgaccacaaagagatcatg
tcccggataacactcaaacaggagaatgacgatggtcctgatgtgcgtgctggatcaggg
gatattctgttagtccacgccacagagacagaccgcaaagatctggtgttgtactgtgag
gtcttcctgaccacatacaggaccttcatcagcccagaggacctaattaagaagctgcac
tacagatacaccaggttctgtcacagtccagacacgtttaagaagcgggtcagcaagaac
accttctttgtgctcgttagagtggtggacgaactgtgtctggtggagttaacagaggac
atcctgaagcagctgatggacctggtgttcaggctggtgtgtaacggcgagctgagcctg
gcccgcgtgctccgcaagaacatcctggacaaggtggagcagaagaagctgctgcgctgc
accaactccctcaagccgctggctgcccggggcgtgtccgcaaggcccggaacgctgcat
gacttccgcagccatgaaatcgccgatcagctcacgcttctggatgcagaacttttctac
aaaatcgagattcctgaggtgttgctttgggccaaggaacagaacgaggagaagagtccc
aatctgactcagttcacagagcactttaacaacatgagctactgggtgcgctctctaatc
attcagcaggagaaaggccaggaccgagagaagctgctcctcaagttcattaagatcatg
aagcacttaagaaagttgaacaatttcaactcgtacttggcaatactgtctgccctggac
tcggcccccatccgcagactggagtggcagaaacagacctcagagggattggaggaatac
tgcactttgattgacagctcgtcgtctttccgagcgtaccgggcggctctggccgacgtg
gagcctccatgcatcccatacctcggtctgatcctgcaggacctgaccttcgtccacctg
gggaaccctgatctcatcgatgggaaggtcaacttctctaagcgctggcagcagttcaac
atcctggacagcatgaggcgcttccagcaagtgcattatgagctgaagcgcaacgacgac
attgtgtgcttcttcaacgacttcagcgaccacctggccgaggaggcgctgtgggagctc
tcgctaaagatcaagcctcgaaacatcacccggagacggacagagcgcgaggagaagacc
tag
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