Coregonus clupeaformis (lake whitefish): 121582157
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Entry
121582157 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like
KO
K21072
A-kinase anchor protein 28
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582157
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121582157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
C1_2
PHD
SOS1_NGEF_PH
PH_13
LMBR1
PHD_2
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
121582157
NCBI-ProteinID:
XP_041753713
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Position
15:complement(1596570..1639002)
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AA seq
1153 aa
AA seq
DB search
MLTQLRLNRIEEEEWDKYNIPSKVESEKYKVIRTFSFLKSRMSTTRKKNKGKGKEKEREK
EREKEREKEGKDKDKQQNGHRFSTGSCAGPTVCLVCDKPTTGKDLLHCSSCTVMVHKGCK
DSAPPCLKKLQDKYAVTMVKNRTASLPQNFTVRDSPSPSLISTSASLPMMSQRDRRETAS
LPNPLSRSVPSATDRLIASPEAESDSSWCPGQSEELLQTTESSTSTDSSLGEDCVDASLH
SDLDADALDYEAESWSLTVEHTFCKKLDKRVVKRQDVIYELMQTEMHHLQTLRIMAEVFR
RGMREEVQLDVCAVDRVFPCLDELLLLHHNLFNAMRECRHSSAQPHGDRNYVIVRIGDIL
LQQFSEDNAERMKQVYGEFCSHHTEAVTFFKELQQHNKRFQTFIKQQSNNYLVRRREIPE
CILLVTQRITKYPVLLERILQYTQEDSEEHRDLSRALVQIKEVIAAVDLRVSEFEQDQRL
QDVLNRMENRCVAKLKNGHTFRKQDVLGPGRTLKHQGLLLWKTATGRLKDVMALLLTDTL
IFLQEKDQKFIFAAVDQKPPVISLQKLIVREVANEERGMFLISASAAGPEMYEVHTSSKD
ERNTWMRLIREAVESCPEEEEENTNESEEERRAAEARVQKIHKLQETLSSQDDQICASLE
EKLQIYAELSALRGRAQEPHPETRLLVQPHPEEVPQAAVLLTAALREAANLRTTLSSWTC
SPSSPCSPPRDPLSHPVSPASPHTPLDTPSDGEVSLGDPDTRDGESASQVLVLQSLTQLH
TGDTNNINLKVAHSVQSLTQLLYSLQAAVTIQDSFYEVQKLLLHESDRPSPRSPRPHTPC
LRGNALQEQEKQRNLEKRREEVAAAVRLQGRLHQERQRWERECQARHSQQGELESRLEER
ERQCHLEAERLKQEREELEEQLGEYQQSLERLRESQRSVEKERERLETQQNLLQSWRHSR
QRSLPVMVIPLDRCHQDSLPGQPGGHLDDGRSVFVNEAAFTTAVVLNNRHVHHHLQQQQR
GGSLGYGDNPRAHNSLNTLLARSSHGHTLQPLSLSQTPQLHLDTHTPQGWAGGTGVTGYL
YTPTGGQDSEQTPNDINTHRYVREMWSSMATVAGQYQGVPHHGDPQLDLSSLVPLETESG
DGEEGGEENIVYL
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctaacccaattgcgcctgaacagaattgaagaggaggagtgggacaagtacaacatc
ccctccaaggtggagtcagagaaatacaaagtgattcgtaccttcagcttcctcaagagc
aggatgtccaccactcgcaagaagaacaaggggaaggggaaggagaaggagagagagaag
gagagagagaaggagagagagaaggaagggaaagacaaggacaaacagcagaatggacat
cgtttctccacgggttcctgtgctggtcccaccgtctgtctggtctgtgacaaacctact
actggcaaggaccttctgcactgctccagttgtacagtcatggtccataagggttgtaag
gactctgctcccccgtgtctaaagaaacttcaggataagtatgcagttaccatggtgaag
aaccgaacggcatccctcccgcagaacttcacagtgcgagacagtccctctccatctctg
atctccacctcagcctctctacctatgatgagccagagggacaggagagaaacagcctcc
cttcccaaccccctctccaggagcgtcccttctgccacagacaggcttatcgcgagtcca
gaggcggagtctgacagcagttggtgtcctggccaatcagaggagcttctgcagaccact
gagtcgtccacgtccactgactcctccctcggagaagactgtgtggacgccagtctccat
agtgacctggatgctgatgctctagactacgaggctgagtcttggagtctgacggtggaa
cacacgttctgtaagaagctggacaaacgggtagtcaagagacaggatgttatctatgag
ttgatgcagacagagatgcaccacctccagacactgaggatcatggccgaggtgttccgg
cgagggatgagggaggaggtacagctggatgtgtgcgccgtggaccgtgtcttcccctgt
ctggacgaactcctcctcctccaccacaacctcttcaacgccatgagggaatgccgccac
agctccgcccagccacacggggacaggaactacgtcatagtacgcatcggagacatcctg
ttgcaacagttttctgaagacaatgcagagaggatgaaacaggtgtatggggagttctgc
agccatcacactgaggcagtcaccttcttcaaagagttacagcagcataacaaacgattt
cagaccttcatcaagcaacaaagtaataactatttggtccgaaggagagagatcccagaa
tgcatcttgttggttacccagaggatcactaagtaccctgttctgctggagaggattcta
cagtacactcaggaggacagtgaggagcacagggacctctctagagctctggttcagatc
aaggaagtgatcgcggcggttgacctgagggtcagtgagtttgagcaggatcagcggtta
caggatgtcctgaacagaatggagaatcgttgtgttgccaagctgaagaacgggcacacc
ttcaggaagcaggatgttctagggccaggccggaccctcaaacaccagggcctgttactg
tggaagaccgccactggacgactcaaagatgttatggctctccttctgacagacacactg
atcttcctacaggagaaagaccagaagttcatattcgctgctgtggaccagaagccccca
gtgatctctctccagaagctgatcgtcagagaggtagccaatgaggagagagggatgttt
ctgatcagtgcgtcggccgcagggccagagatgtacgaggtccacacctcctctaaagac
gaacgcaacacctggatgagactcatcagagaggctgtagagagctgtccagaggaagag
gaggagaacactaacgagtcagaggaggagagaagagcagctgaggccagagtccagaag
atacacaaactacaggagaccctgtccagtcaggatgatcagatatgcgccagtctggag
gagaagctacagatctatgctgagctgtctgccctgaggggcagggcccaggaaccacac
cctgagacacgcctactggtccagccacacccagaggaggtgccccaggctgcagtactg
cttactgccgcgctcagagaggctgcgaacctgaggaccactctgtcttcgtggacctgt
tccccctccagcccctgcagccctcccagggaccccctatcccaccctgtgtccccagcc
agccctcatacccccctggacaccccctcagatggggaggtctctcttggggaccctgat
accagggatggggagtcagcctcccaggtcctcgtactgcagtccctgactcaactccac
actggggacactaataatatcaaccttaaggtggctcacagtgtccaaagcttgacccag
ttactctatagtctacaggcggcggtaaccatccaagacagtttctacgaggttcagaag
ctcctcctccatgagagtgaccgcccctccccccgctctccgagaccacacaccccatgt
ctccgtggcaacgctctgcaggagcaggagaagcagcgtaacctggagaagcgccgtgag
gaggtggcggcagcggtacggctgcagggcaggctgcaccaggagagacagcggtgggag
agggagtgccaggcgcgccacagccaacagggggagctggagagcaggctggaggagagg
gagagacagtgccacctggaggctgagaggctgaagcaggagcgggaggagctggaggag
cagctgggggagtaccagcagagcctggagaggctgagagagagccagaggagtgtggag
aaggagagggagaggctggagacccagcagaacctgctgcagagctggagacacagccga
cagaggagcctgcctgtcatggtcataccgctggaccgctgtcatcaggactcacttcct
ggtcagcctggcggccatcttgacgacggccgctcagtgtttgtcaacgaggcagcgttc
accacggcagtggtgctcaacaaccgccacgtgcaccaccacctgcagcagcagcagaga
ggggggtccctggggtatggggataaccctcgagcccacaacagcctgaacaccctactg
gcccgctccagccacggacacacactccaacctctctccctctcccagaccccccaactc
caccttgacacacacaccccccagggttgggcggggggcaccggtgtcaccgggtacctc
tacacaccaacagggggacaggactctgagcagacacccaacgatataaacacacaccgc
tatgtgagggagatgtggtcgtcgatggcaacagtggctggacaatatcagggtgtaccc
caccatggtgacccccaactggacctgtcctccttggttcccctggagacggagagtggg
gatggggaggaggggggagaggagaacattgtgtacctctga
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