Coregonus clupeaformis (lake whitefish): 121582159
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Entry
121582159 CDS
T08357
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00511
Other glycan degradation
cclu00513
Various types of N-glycan biosynthesis
cclu00520
Amino sugar and nucleotide sugar metabolism
cclu00531
Glycosaminoglycan degradation
cclu00600
Sphingolipid metabolism
cclu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cclu00604
Glycosphingolipid biosynthesis - ganglio series
cclu01100
Metabolic pathways
cclu04142
Lysosome
Module
cclu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121582159
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121582159
00513 Various types of N-glycan biosynthesis
121582159
00531 Glycosaminoglycan degradation
121582159
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121582159
00604 Glycosphingolipid biosynthesis - ganglio series
121582159
00511 Other glycan degradation
121582159
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121582159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121582159
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
121582159
Chaperones and folding catalysts [BR:
cclu03110
]
Intramolecular chaperones
Others
121582159
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
121582159
NCBI-ProteinID:
XP_041753715
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Position
15:complement(1326912..1339760)
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AA seq
547 aa
AA seq
DB search
MFATLKFAALLLALVVCRAAQDYDYNDAEMDEEPTDSQYGSLWPLPQKVQISTVVFKLSG
ASFHIIDAKESSSGASCILLQNAYRRYDEYIFTSSRKQGQNKSKKALASDISELQVWITS
ADSECDSYPSVTSDESYELSVDSPVAVLKAPKVWGALRGLETFSQLVYKDEYGAKSINRT
DIHDFPRFAHRGLLLDTSRHFLPIKVILANLEAMAWNKFNVFHWHIVDDPSFPYLSRTFP
QLSQQGAYHPYTHVYTPSDVKMIIEFARLRGIRVVPEFDTPGHTQSWGKGQKDLLTPCYS
GASPSGSFGPVNPILNTTYDFMSMFFKEVSTVFPDAYVHLGGDEVDFSCWKSNPDIQKFM
EQQGFGTDYSKLESFYIQRLLDIVTTTNKGYMIWQEVFDNGVKLKSDTVVHVWMGNKVEE
ELQKVTEAGFTTILSAPWYLDYISYGQDWQKYYRAEPLGFKGTDTQKKLVIGGEACLWGE
YVDATNLTPRLWPRASAVGERLWSDRDVRNLNDAYSRLAKHRCRMVQRGIPAEPLFTGYC
AHEYKGV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgacgctgaagtttgcagcgttgttgctcgcgcttgttgtctgccgggcagcg
caagattatgattataatgacgctgaaatggacgaggagcctactgattctcagtatgga
tctctttggccgttgcctcagaaagtccaaatatccacggtagtattcaaactcagcggt
gctagcttccatataatcgacgctaaagaatcgtcttctggtgcaagctgcatacttctt
caaaatgcatatagaaggtatgatgagtacatctttaccagttccagaaagcaagggcaa
aacaagagcaagaaggcattggcctctgacatatctgaattacaggtgtggatcacgtca
gctgactcggagtgtgacagctaccccagtgtgacatctgacgaatcatacgaactgtca
gtggactctcctgttgctgtgctgaaagcacctaaggtgtggggagctctaagaggtctg
gagacttttagccagttggtgtataaggatgaatatggagcaaaaagcatcaataggaca
gacattcacgacttcccacggtttgcacatcgaggcctcttattggacacctctcgtcac
ttcctgcccatcaaagtcatcttagccaatctggaagccatggcgtggaacaaattcaat
gttttccactggcacatagtagatgacccctccttcccctacctgagccgtaccttcccc
cagctgagtcaacagggagcataccacccatacacacatgtgtacacgccttctgatgtg
aagatgataatcgagtttgctcgcctcaggggcattcgggttgtccctgagtttgacacc
cctgggcacactcagtcatggggcaaagggcagaaggacctgctgaccccctgttactct
ggagccagcccctctggttcgttcggaccagtcaaccccatcctcaacaccacctatgac
tttatgagcatgttcttcaaggaagtcagcacagtgttccctgatgcctacgtccatctg
ggaggagacgaggtcgacttcagctgctggaagtccaaccctgacatccagaagttcatg
gagcagcaaggctttgggacggactacagcaagctggaatcattctacatccagaggctc
ttggatattgtcaccactaccaacaagggctacatgatctggcaggaggtatttgacaat
ggagtaaagttgaagtcggacacggtagtgcatgtgtggatggggaacaaggtggaggag
gagcttcagaaggtgacagaggcaggcttcaccaccatcctctctgccccctggtaccta
gactacattagctacggacaggactggcagaagtactacagggccgagccgctgggcttc
aagggcacggatacccagaaaaagctggtgattgggggagaggcatgtctgtggggagaa
tatgtggatgctaccaacctgacacctagactctggccccgtgccagtgctgtgggggag
cggttgtggagtgacagggatgtgaggaacttaaacgatgcctacagtcgtctggccaag
caccgctgtcgcatggtccagcgtggtatcccagctgagcctctttttacaggttactgt
gcacatgagtacaaaggggtatga
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