Coregonus clupeaformis (lake whitefish): 121582179
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Entry
121582179 CDS
T08357
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121582179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121582179
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121582179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HTH_Tnp_1_2
PLU-1
Motif
Other DBs
NCBI-GeneID:
121582179
NCBI-ProteinID:
XP_041753740
LinkDB
All DBs
Position
15:complement(46210632..46225781)
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AA seq
1391 aa
AA seq
DB search
MRSALGPSSPAAALTEALESSGRLIDRHLQDDRCFPDLSELLNVPSHNMPSLSGGSDMDY
PLQGPGLISVPNLPELSAVRRIPLPPELVEQFSHMQCNCMMGVFPEICRAWLTIDNDIFM
WNYEDGGDVAYFDGLSETILSVGLVKPKAGIFQPHIHFLLVLATPVDVVILGLSFPKAQA
GLNDSMSGGMQLLPDPLYSIPTDNTYLLAITSTDLGRIFLAGKDGCLYEVAYQAEAGWFS
QRCKKINHSKSSLSFLVPSLLQFSFSEDDPVVQIAIDNSRNTLFTRSEKGVLQVYDLGVD
GQGMSRVAAMSQSSIVAAAGNVARTIDRSVFKPIVQISVIDRSESSDCHLLAVTHAGVRL
YFSTTPFAPPHAKHPAARPSLLALVHVRLPPGFSASSTLQKPAKVHKALHSKGVLLMAAS
ETEDSDILWCINHDSFPFKKPLMEAQMMSNVDGHSWALCAIEEEKAPKISTPLNKDQVPL
TDSPVVVQQHNVPPQKFVLLSAKGSHIFHKLRPVDQLRHLLVSGTGGESEEIERFFKLHR
EEQACATALILACSSAACDREVSQWASRAFFRYGGEAQMRFASAHSAPSNVGALFGSPVP
GSPMPVGSSPMPNPSFLATPAPGMMPQSVSTPYIPTTPMSSAPITGMSSGPEVVFSGKHN
GISVYFTRILGNIWDGSLAVEKTISKGNQAVSILESTASSSDLELVLLELRGLKDFLDKN
SQFSPSSLGSASFSSPANLQQRLLGFMRPDGGASSQQVQQELQRKYHTEAQAYEKMSLQG
IQQLVHRSCQTLALWKLLCDHQFSLIISELPMEFQDQMKGASFKDVVIRGRELTGALITA
LINVYIKDSASVDAISNHLRDICPLLYSSDDSVCSKANELLQGSRQIQTKTDKERTLRES
LQLYQLISQHTDLPLVCSQYRQVRFYEGVLELCLTAADKKDPQKLGPHFYKNGEPEEDHA
GALAFQERLSCYKCITDTMQELVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDATAHF
EQVIGLAQRSQDELFHIALYNWLIQADLTDKLLEVNSPYLEEHLMHMIKQDQSKVRNMDL
LWRYYEKSRSFGKAAHVLARLADMHSTEISLKQRLEYISRAILSAKSSSCISAQGAEGEF
LHELEEKMEVVRIQVQIQETLSRRYSQHPSVQGAMSQLDSELMDITKLYGEFADHFRLSE
CKLAIIHCAGHSDPILVHSLWQEIMEKELGDGVAMSPADRMRALSLKLVSLGKIYAGTPR
YFPLEFLVKFLEQEVCRLNWDVGFVTFTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKP
LHLVECIHVLLTGYVEDPSRVPTYDRRRFTNVCLDNICGYLVELQSLSPNSALRLTIGNF
KALQAKLEKVH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctgccttgggacccagcagtcctgctgctgcccttaccgaagcgctggagagc
tccggccggctaatagacagacaccttcaggatgaccgctgcttccctgacctctcagag
cttcttaatgtcccctctcacaacatgccatctttgtctggggggtcagacatggactac
cctcttcagggacctgggctgatcagtgtgccaaacctccctgagctcagtgcagtccga
aggattcccctaccccctgagctggtggagcaattcagccatatgcagtgcaattgtatg
atgggagtttttcctgaaatctgtcgggcatggctcaccattgacaacgatatcttcatg
tggaattacgaggatgggggggacgttgcatattttgacgggctcagtgaaaccatcctg
tccgtggggctggtcaaacctaaagcagggattttccagccacacatccacttcctgttg
gtcctagccactcctgtggatgtagtgatcctggggctcagcttccctaaagctcaggca
gggttgaatgacagcatgtctggagggatgcagttgctcccagacccgctgtactccatc
cccacagacaacacctacctcctggccatcacctccaccgacctgggccgcatcttcctg
gcagggaaagatggctgcctgtatgaggtagcctaccaggccgaggcaggctggttcagt
caacgctgtaagaagattaaccattccaaaagcagcctgtccttcctcgtcccctctctg
ctccagttctccttctctgaggacgacccggttgtgcagattgccattgacaactcccgt
aacacactcttcacccgctcagagaagggggttctacaggtgtatgatctgggtgtggat
gggcagggtatgagccgtgtggcagccatgtcacagagttccatcgtggctgcagcagga
aacgttgccaggaccatagatcgctctgtgtttaaacccatcgtacagatctctgtgata
gacagatcggagtcgtctgactgccacctgctggctgtcactcatgcaggagtgcgtctc
tacttcagcaccactccctttgccccaccacatgccaagcacccagcggcacgccctagt
ctgctagctctggtccatgtccgcctgcctccaggcttctctgcctcctccaccctgcag
aagcctgccaaggtccacaaggctctgcacagcaaaggagttctcctgatggcagcgtct
gagacggaggacagtgacatcctgtggtgtatcaaccatgactccttcccctttaagaaa
cccctgatggaggctcagatgatgtccaatgtagatggccactcctgggcactttgtgcc
atcgaggaggagaaagcacctaaaatctctacccccctgaataaggatcaggttcccctc
actgactctcctgtcgtggtgcagcaacacaatgtccctccacagaagtttgtccttctc
tctgccaagggaagtcacatcttccacaagttgcggccggtggaccagctacgccaccta
ttggtgagcggtactggtggagagagtgaagaaatcgaacgcttcttcaaactgcacagg
gaggagcaggcgtgtgccactgctctgattctggcctgctccagtgctgcctgcgacaga
gaagtgtctcagtgggcctccagagccttctttaggtatggaggagaggctcagatgagg
ttcgcctcggctcattctgctcctagcaacgttggcgcgctgttcggctctcctgtacca
ggatcccctatgcctgttggtagcagtcccatgcctaaccctagtttcttagctacgcct
gctccaggtatgatgccccagagtgtgtctacgccctatatacccaccacgcccatgtcc
tccgcccccatcactggcatgtcctctgggccagaggtggtcttctcagggaaacacaat
ggcatcagtgtctacttcacacgcatactgggtaatatctgggatgggagtcttgctgtt
gagaagaccatcagtaaaggaaatcaggctgtcagtattttggagagcacagccagctca
tctgatctggagttagttcttctggagcttcgtggtctgaaggacttcctggataagaac
tcccagttcagtccctcatctctggggtcagccagtttcagctctccagccaatctgcag
cagcggctgttgggtttcatgcggcctgatggaggagccagttctcagcaggtccagcag
gagctccagaggaagtaccacaccgaggctcaggcttatgagaagatgtcccttcagggt
atccaacagctggtgcatcgctcctgtcagaccctggccctgtggaagctgctgtgtgac
caccagttcagcctcatcatctctgaactacccatggagttccaggaccagatgaagggg
gcgagttttaaggacgtggtgatccggggtcgagagctgaccggagctctgatcacagcc
ctcatcaacgtctacatcaaagactctgcctctgtagatgccataagcaaccaccttaga
gacatctgccctttgctgtacagcagcgacgacagcgtctgctcaaaggctaatgagttg
ctgcagggctccagacagatccagactaagacagataaggaaagaacactgagagagtca
ctacagctctaccagctgatcagccagcacacagacctgccactggtctgctcccagtac
cgacaggtgcgtttttatgagggggtgctggagctgtgcctgactgcagcggataagaag
gatcctcagaagctgggacctcacttctataagaacggagagccagaggaggaccatgct
ggagcactggccttccaggagaggttgtcatgttataagtgcatcacagataccatgcag
gagctggtgaaccagagtaaagctgctcctcagtctcccagtgtccctaagcagccagga
ccccctgttatgacctctgaccccaacatgttgagtaatgaggacgccaccgcccatttt
gagcaggtcattggtctggcccagaggtcacaggatgaactcttccacatagccctctac
aattggctgatacaggctgacctcaccgacaagcttctggaggtgaactctccgtacctg
gaggaacacctgatgcacatgatcaagcaggaccagagtaaggtgcggaacatggacctg
ctgtggagatactatgagaagagccgtagctttggcaaggcagctcatgtcctggccagg
ctcgctgacatgcacagtactgagatctccctgaagcagaggctggagtacatctccagg
gccatcctgtcagccaagagctcctcctgcatctctgctcaaggagctgagggggagttt
ctgcatgagctggaggagaagatggaggtggtgcgtattcaggtccagatccaggagact
ctgagtagacggtactcccagcatccctctgtacagggagccatgtcacaactggattcc
gagcttatggacatcaccaagttgtatggggagtttgcagatcacttccggttgtctgaa
tgcaaattggccatcatccattgtgctggtcactctgaccccatcctggtgcactctctg
tggcaggagatcatggagaaagagctgggtgacggtgtggccatgagtccagccgacaga
atgagagctctgagtctcaaactggtgtctctgggaaagatctacgcaggaacacccaga
tactttccactagaatttctcgttaagtttttggagcaggaggtgtgtcgtctgaactgg
gacgtgggctttgtcaccttcaccatgcaggagataggagtacagctgccccgtctgctg
gaggtctacgaccaactcttcaagacacgggatccgtgttggcagcgtctgaagaaacct
ctccacctggtagagtgcatccatgtgctgctgacaggatatgtagaggaccccagcaga
gtaccaacatatgaccgacggcgattcactaacgtgtgtctggataacatctgtggttac
ctggtggagctgcagtccctgagtcctaactctgccctgcggctcaccatcggcaacttc
aaggccctgcaggccaagctggagaaagttcactga
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