Coregonus clupeaformis (lake whitefish): 121582203
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Entry
121582203 CDS
T08357
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121582203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121582203
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
121582203
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GFIT
Motif
Pfam:
MPN_2A_DUB_like
JAB
Motif
Other DBs
NCBI-GeneID:
121582203
NCBI-ProteinID:
XP_041753785
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Position
15:46817600..46822927
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AA seq
400 aa
AA seq
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MLSSLTTANMADSNSSVRISGFVLGSLMFQHFNSDSDVEGLILGESKAEARSNITDSQID
NIQFEHTINIQKHISCRKLNSFYNRIGEVNQDEVRYLLSNNKEENVIGWYKQRRNTDQQI
TFREQVVHENLKRALSNHELIFLLLTPSEVTSSGSTHKLEYAVYRSHCSQYRSVPVLVSN
LGLLEQQDYWRLSASCSSVNYNRAVWKHRSRFFSLDGSLQEVDEINEMNNSLQVELKTAC
KKVEESERLVEELLEDVSSLRRTVSERKQEQKETDGDSTPAQSQENVLLCEAIKTLFPGA
ALLQTQALTFQGFPVPEFCCNTDHGIDITTTLPLILTHTVPKARKGRLGRGGATSWRKHP
LCESSEAPKRRKRMLEETEGSSLSVSGSETEEDLIPANQN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttcgttgacaacagcaaacatggcggactcaaactcctctgttcgcatctcc
ggatttgttcttggttcattgatgtttcagcactttaacagtgattctgatgtggaaggt
ctcattcttggggagagcaaagctgaagcgagaagcaacatcactgattctcaaatcgac
aacatacagtttgagcatacaataaacattcagaaacatatatcctgtcgcaagctcaat
agcttctataatagaataggggaggtgaaccaggatgaagtaaggtaccttttatccaac
aataaggaggagaatgtgattggttggtataaacagcggagaaacacagatcaacaaatt
accttcagagagcaggtagtccatgagaacctgaagagagcactctccaatcacgagctg
atctttctgctcctgacacccagtgaagtcacatcatcaggctccactcacaaactggag
tatgcagtctacagatcacattgcagtcagtaccgcagcgttcctgtcctggtcagcaac
ctgggtttgttggaacagcaggactactggagactgtctgcatcttgttcatcagtcaac
tacaaccgtgctgtttggaaacacagatctagattcttctccttagatggatccctgcag
gaggtggatgagattaatgaaatgaacaactccttgcaggttgaactgaagacggcatgt
aagaaagtggaggagagtgagcgattggtcgaggagctgcttgaagatgtttcgtctcta
aggaggactgtcagtgagaggaaacaagagcagaaagaaacagatggagactccactcca
gcccagtctcaggagaatgtactgctctgtgaggccattaagacactgttccctggggca
gctctcctccaaacacaggctctaaccttccaggggttccccgtgcccgagttctgctgt
aacactgaccatggcatagacatcaccacgacactgcctttgatcctgactcatacagtc
cccaaagccaggaaggggaggcttggtagaggcggagcgacgtcctggagaaaacatccc
ctttgtgaatcatccgaagcgcccaagaggaggaaacgcatgctggaggagactgagggg
tcttcattgtcagtcagtgggtcagaaaccgaggaggatttgataccagccaatcaaaac
tga
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