Coregonus clupeaformis (lake whitefish): 121582212
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Entry
121582212 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582212
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Others
Others
121582212
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121582212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
121582212
NCBI-ProteinID:
XP_045071035
LinkDB
All DBs
Position
1:26464911..26543953
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AA seq
1614 aa
AA seq
DB search
MNGVAFCLVGIPPRSENEAKGRRDGVLSSNENTRSLSSGEVEGVAWQGPCTVLLQKNSQG
FGFTLRHFIVYPPESSLHNNLKDEENGNGNGKGCQRGRLEPMDTIFVKSVREKSPAHQAG
LCTGDRLVKVNGESVLGKTYSQVIALIQNSENVLELCIMPKDEDVLQLVSAYSQDAYLRG
NEPYTGGAQHIPDPPPLCYPRAKPASTAPLPPNHQSPLDNWHCRPSPVSLASPLDNRSAA
ANVTQTSGRPRGPGENEEDGCGHFGSSAGQEGDWQPSLGQNRGRSSSAVSALDFHFANHN
AAIASATLPHMPARKGSLPATRAHSDAMCHQALSDWYYSQAEAAERMSPRHRSISQDRLA
ELGLGLALGPGGAGGPGSTSMSSMAHRDRGVSQETLLLHHQAAAASHDSYWLGVSGPGSR
SCSESLLAAYASYERSYGRSQETLAQAAALVSPYHERAPAWPSQGAKEQDKDLGNHHTVT
PTTAATLATAPSIGRQTQQQHVAEPQTQSRRLEEEELVGYKSYSPSFCRKASHLLQQAHS
FREPTYIGPHLNWVPSAKTSLSDCEGGGIGGGMVVPRPSSTPAIIPSSSEDERVRLGEET
LSPLPLGQEVVLRQKPPTGRRIPMHALLHPHYALPVDSAEPPVGLLPSPSTPTAGTPSPV
CGGPRMGDSLQRPNGSLQPHHSTPDSLASIPFIDDPISPSADLRARHVPACSVVSSSSAL
CPLVPSLPCALTSSTTTVSPVTLSSSTSPLVKLRSQDCSSIKSRRSSYLLAITTERSKSC
DEGLNTFREEGRVFSRLPKRVKSFFTDGSLESLRAAEEARSKRHSTSELGTITFSDVRKD
GWLHYKQILTEKGKKVGGGMRPWKRVFSVLRSYRLLLYKDKREAVLHGAGAGPGHGEDEH
PPISIRGCLIDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLGWIRVIRENSKTDNEE
LGFSRQALINKKLNDYRKQSPTGNKPDTSPRAHRMMPPFLLAKTDNAFMNRSSSKDESKG
PWGIIMKKAKKTGPKVFGVRLEDCQPAVNNKFVPLIVELCCGLVESMGLEYTGVYRVPGN
NAMVSNLQEQLNKGLEINITEERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIDANRL
EDSGNRLKSMKKLIHDLPDYYHHTLRFLVCHLKTVADHADKNKMEPRNLALVFGPTLVRT
SEDNMTDMVTHMPDRYKIIETLILHHDWFFSDGEVDKDEKAPVDIKRDMQPVPNIDHLLS
NIGRTGLPGGEASDSTTSDSPKDKCTLASKKDLSARDFLPLSIISAVTRKRKIRPISRPL
SSSTDEDSEHEPIKASNYGEGGGAKEEEEEGVGEGCAPNGTEKVEKKGEEECRKRIEVKQ
QSDRGREEGEGKKEGSAWAKDKEGVAFPKPHPNSFLYTHYQPPTTTSPSPPGKPSVSPHS
KRPSLARGRAAVPSWLSPSRLPGPSQPYNTQKTQQPQLEKQPLPVQYRKTRGGRARPQSM
NLDMVLGKGEGEGGVGRRGDRVKVVRATTEVQRHRSSSVGVPQGCIVTSLKVQGSSRLAS
APAPVSSLSPPLPSSPFSPAWTDQSSLGSAVVMRRSALEPRDKRKALRRHTVVV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttgccttttgccttgttggaattccaccccgctctgaaaatgaagctaaa
gggcggagagatggcgtcctgtcatccaatgagaacactcggtcgctgtcgtcgggcgag
gttgagggcgtggcgtggcagggcccttgtacggtgctcctgcagaagaactcccagggc
ttcggcttcacgctacgccacttcattgtgtacccgccagagtcctccctccacaacaac
ctcaaggatgaggagaatggaaacggcaatggaaaaggttgtcaaaggggtcgtctggag
cccatggacaccatctttgtaaagagtgtgagggagaaaagccctgcccaccaagctggc
ctgtgtacaggggacagactggtaaaggtgaatggggagagtgtattggggaagacctac
tctcaggtgatcgcattgatccaaaacagcgagaatgttctggagctctgcatcatgcca
aaagatgaggatgtgttgcagttggtaagtgcgtactctcaggatgcctacctgagagga
aatgagccatatacgggaggggcgcagcatatccccgaccctccccccctctgctacccc
cgtgccaagcccgcttccacagctcctctgccacccaaccaccaaagccccctggacaac
tggcactgccgccccagccctgttagcctagcctcccccttggacaaccgctctgccgcg
gctaacgtaactcagacctccggcaggcccaggggtccgggagaaaacgaggaggatggc
tgcggccattttggctcctctgcaggacaagagggagattggcagccatctttggggcag
aaccgcgggcgctcgtcgtcggccgtcagcgcactggacttccactttgccaaccacaac
gccgccattgcctctgcgaccctgccccacatgcctgcccggaagggaagtttaccagct
acgcgtgcccacagcgacgccatgtgccaccaggcgctgtcggactggtactacagccag
gcagaggcggccgagcgcatgtcccctcgacaccggagcatatcccaggatcggttagcc
gagctggggttgggcttagcgctggggcctggtggcgctggaggtcctgggtctacctct
atgtcctccatggctcacagagaccgcggcgtttcccaagaaactctgctactccaccac
caggcagcagccgcctcccacgattcctattggctgggagtgtctgggccagggagccgt
tcgtgctcggaaagcctgctggcggcgtacgcgtcgtacgaacgtagctacgggcgctcg
caggagacgctagcccaagcggctgcgctggtgtcgccgtaccacgagagagcccccgcc
tggccatcgcagggtgccaaggagcaggacaaggacttgggaaaccaccacacggttaca
cccacaaccgcagccacactggccacagccccctccattggtcggcagacccagcagcag
catgtggctgagccccagacccagagcaggaggttggaggaagaggagctggtgggctac
aagagttacagcccctccttctgccgcaaggccagccacctcctccaacaggcccactcc
ttcagagaacccacctacattggaccccacctcaactgggtacccagtgccaaaactagc
ctctcggactgcgagggaggcgggataggaggggggatggtagttcctcgtccttcctcc
accccggccatcatcccttcttcgtcagaggatgagagagtgaggctgggggaggagacg
ttgtccccactccctctgggccaggaggtggtgctgaggcagaagccccctacggggcgt
cggatccccatgcacgccctccttcacccccactacgccctccccgtggattcggccgag
ccccccgtcgggctgctgccctcccccagcacccccactgcagggacaccctcgcccgtc
tgtggtggtcccagaatgggggacagtctacagaggcccaacggtagcctgcaaccccac
cacagcacacccgactccctggcctctattccctttatagatgaccccatcagccctagc
gctgacctacgtgcccgccacgtacccgcctgctccgtggtgtcctcctccagtgccctg
tgccctcttgtgccctctttgccctgtgccctcacctctagtaccactactgtctcccct
gtcaccctctcctcctccacctcccccctcgtcaagctccgctcccaggactgcagcagt
atcaaaagccgccgttcctcctacctgctggccattaccacagagcgctccaagtcatgt
gacgagggcctcaacaccttccgggaggaaggccgtgtcttctcgagactaccaaaaagg
gtgaagagctttttcactgatggatctctggagagtctgcgtgctgcagaggaggcgcgg
tcgaaacgtcactccacctccgagctggggaccatcaccttcagtgacgtacgcaaggac
ggctggcttcactacaaacagatcctcacggagaagggcaaaaaggtgggcggcggcatg
cgtccatggaagcgcgtcttctccgtgctgcgctcctaccgcctcttgctctacaaagac
aagcgggaggcggtcctccatggggcaggggcgggacctggccacggggaggatgagcac
cctccaatcagcatccgcggctgcttgattgacatcgcctatagcgaaaccaagcgtaag
cacgctctgaggctgaccactcaggacttctgtgagtacctgttgcaggctgaggacaga
gaagacatgctgggatggatccgggtcatcagagagaacagcaagacagacaacgaggag
ctgggtttttccagacaagcactcatcaacaagaagctcaatgactacaggaaacaaagt
ccaacaggcaataagccagacacctctcccagggcccatcgcatgatgccccccttcctc
ctggccaagacagacaacgctttcatgaaccgctcctccagcaaagacgagagcaagggt
ccatggggtatcataatgaagaaagccaagaagacaggccccaaggtgtttggagtgcga
cttgaggactgtcaacctgctgttaacaacaagtttgtccctctgatcgtggagctgtgc
tgtgggctggtggagagcatgggtctggagtacactggcgtctacagggtgcccggcaac
aatgccatggtgtccaacctgcaggagcagctcaacaagggcctggagatcaacattact
gaggagagatggcaggacctgaatgtgatcagcagtctcctcaagtccttctttaggaaa
ctcccagaacccctgttcactgatgacaagtataatgacttcattgatgccaaccggctg
gaggactcagggaacaggttgaagagcatgaagaaactgatccatgatcttccagactac
tatcaccacactctaaggttcctggtctgtcatctgaagacagtggcggatcacgccgac
aagaacaagatggagcccaggaacctggctctagtgtttggtcccactctggtgcgtacc
tcggaggacaatatgaccgacatggtcacccacatgcccgaccgctacaagatcatcgag
acgctcatcctgcaccatgactggttcttcagtgatggagaggtggataaggatgaaaag
gccccagtggatattaaaagggatatgcaaccggtccccaacatcgatcacctgctctcc
aacatcgggagaacagggctgcctggaggtgaggcttcagattccaccaccagcgattca
cctaaggataagtgcacattggcttccaagaaggacctgagtgccagggacttcctccca
ttgtcaatcatctccgccgtcacccggaaacgcaagatacgccccatctcccgccccctg
agcagcagcaccgacgaagactctgagcatgagccaatcaaagccagcaactatggggaa
gggggaggggccaaggaagaagaggaggagggggttggagaaggatgcgcccctaatgga
actgagaaagtggagaaaaaaggagaagaggagtgtaggaagaggatagaggtaaaacag
cagtctgacagaggaagagaggagggagaagggaagaaagaagggagtgcatgggcgaaa
gataaagaaggggtggcattccccaaacctcatcctaacagcttcctctacacacactac
caaccccccaccaccaccagccctagccccccaggaaagccctcagtctccccacattcg
aagcgccccagcctggcccgaggacgcgccgctgtcccctcctggctctccccctccaga
ctgcccggccctagccaaccttataacacccagaaaacacaacagccccagttggaaaag
cagccactgccagtgcagtataggaagacaaggggaggaagggcaaggcctcagtcaatg
aatttggatatggtgctgggtaagggggagggcgagggtggagttgggagacggggagat
agggtgaaggtggtaagagccacaacagaagtgcaacgtcaccgcagcagttcagttggt
gttcctcaggggtgcattgtcacatccctcaaagttcaaggcagttcacgcctagcctca
gccccagctccagtctcttctctctctccccctctcccttcctcccccttttcccctgca
tggacagatcagagctcccttggttctgctgttgtcatgcggaggtcggccctggagcct
cgggacaagcggaaagccttgcgccgccacacggttgtggtctaa
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