Coregonus clupeaformis (lake whitefish): 121582233
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Entry
121582233 CDS
T08357
Name
(RefSeq) BRCA1-associated protein isoform X1
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121582233
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121582233
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121582233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4
zf-RING_11
zf-RING_UBOX
RRM_1
CENPH
Crescentin
Tropomyosin
NET2A
zf-C3HC4_3
V_ATPase_I
zf-ANAPC11
Sec10_N
ATG16
DUF1664
APG6_N
YabA
UPF0242
Motif
Other DBs
NCBI-GeneID:
121582233
NCBI-ProteinID:
XP_041753840
LinkDB
All DBs
Position
15:complement(18062590..18073907)
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AA seq
605 aa
AA seq
DB search
MSVSLVVIRLELADQSLSPQDFQYTAAEDMSEEDLQEKALGSARLSLSGKTELERAAVLH
QHIGSRAMGDMVIETFAPNPDKGKVEQTGAEREEGGGARPLENQPDGRDPTEGTTNEGTT
EGSADGTEMAPDSPSKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMLC
ILTVPSTMTSHDLMKFVAPFYDVMEHMKIIRDSTPNQYMVLIKFSSQADADSFYTACNGR
TFNSIEDAVCQLVYVERAEVMKSEQGASLPVMELTELPKCTVCLERMDESVNGVLTTLCN
HSFHSLCLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRH
AYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKMVQYGCEGETCHEEKIDAL
QLEYSYLLTSQLESQRIYWENKIVHLEKDTAEEINNMKAKFKETIDRCDNLERRLGELAK
DKQSMDKKCGQLSTRVTKLGQELKEEQEMNRCLRANQVQLQAQLAEEERKARETGERKDG
VIAELQEQLRDVMFYLETQQQIEGLPPETRTEIQEGHINIGAAATPAPGPSAIGRGRRGR
SKRGK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatcactggtcgttatccgtctggagctcgcagaccagtctctctctccacag
gatttccaatacaccgccgctgaggatatgtccgaggaggatttgcaggagaaagctctg
ggctcagccaggctttctctgagtgggaagaccgagctggagagagcagcagtcctacac
cagcatatcggcagcagagccatgggagacatggtcatcgagaccttcgcacccaaccct
gataaaggaaaggttgagcagactggggcagagagagaggagggtggaggagcccgacct
ctagagaatcaaccagacgggagggaccctactgagggcactacaaatgagggcactaca
gagggcagtgccgatggcacagagatggctccagactcgccctcgaagcagcttccagac
cagatctccttcttcagtggaaacccctcagtggagatagtccacggcatcatgcacctc
tacaagaccaacaagatgacatcactgactgaggacgtgcgtcggagtgccatgctgtgt
atcctgaccgtcccctccaccatgaccagccacgacctcatgaagtttgtggcacctttt
tatgatgtcatggagcacatgaagatcatacgagactccacccctaaccagtatatggtg
ctgattaagttcagtagccaggctgatgcagatagtttctacacagcgtgtaatggccgt
acgttcaactccatagaggatgcagtctgccagctggtctatgtggagagagccgaggtc
atgaagtctgagcagggcgccagtcttccagtgatggagctgacagagcttcctaagtgt
accgtgtgtctggagaggatggacgagtcagtgaatggggttctcactacactctgtaac
cacagcttccacagcctgtgtctgcaacgctgggaggacgcctcgtgtcctgtgtgtcgg
tactgccagaccccagagcctgtagaggagaacaagtgctttgaatgtggagtacaggag
aacctgtggatctgtctgatctgtggtcatatcggctgtggtcgctacgtcagtcgtcat
gcctacaaacactttgaagagacgcaacacacttatgccatgcagctcactaaccaccgt
gtctgggactatgctggagataactatgttcacaggctggtggccagtaagactgatggg
aagatggttcagtatgggtgtgaaggagaaacctgccatgaggaaaagatagacgcactg
caattagagtactcttacctgctaacgagtcaactggagtcccagcgcatttactgggag
aataagatagttcacctggagaaggatacagcggaggagatcaacaacatgaaggccaaa
tttaaggagaccatagatcgctgtgataacctggagcgtcggctgggagagctggccaaa
gacaaacagagcatggacaagaagtgtggtcagctgtcgacccgtgtgacgaagcttggt
caggagttgaaggaggaacaggaaatgaaccgctgtctgcgagccaatcaggttcaacta
caggcccagctggccgaggaggagcgcaaggcaagagagacgggcgagcgtaaggacggg
gtgatagcagagctccaggagcagctgagagatgtgatgttttacctggagacccagcag
cagatagaaggtcttcctccagagaccaggactgagatacaggaaggacacatcaacatc
ggcgcagcagccactcccgccccaggaccctccgccataggcagaggccgcagggggcgg
tccaaaagggggaagtag
DBGET
integrated database retrieval system