KEGG   Coregonus clupeaformis (lake whitefish): 121582233
Entry
121582233         CDS       T08357                                 
Name
(RefSeq) BRCA1-associated protein isoform X1
  KO
K10632  BRCA1-associated protein [EC:2.3.2.27]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121582233
Enzymes [BR:cclu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121582233
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121582233
SSDB
Motif
Pfam: BRAP2 zf-UBP zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-C3HC4 zf-RING_11 zf-RING_UBOX RRM_1 CENPH Crescentin Tropomyosin NET2A zf-C3HC4_3 V_ATPase_I zf-ANAPC11 Sec10_N ATG16 DUF1664 APG6_N YabA UPF0242
Other DBs
NCBI-GeneID: 121582233
NCBI-ProteinID: XP_041753840
LinkDB
Position
15:complement(18062590..18073907)
AA seq 605 aa
MSVSLVVIRLELADQSLSPQDFQYTAAEDMSEEDLQEKALGSARLSLSGKTELERAAVLH
QHIGSRAMGDMVIETFAPNPDKGKVEQTGAEREEGGGARPLENQPDGRDPTEGTTNEGTT
EGSADGTEMAPDSPSKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMLC
ILTVPSTMTSHDLMKFVAPFYDVMEHMKIIRDSTPNQYMVLIKFSSQADADSFYTACNGR
TFNSIEDAVCQLVYVERAEVMKSEQGASLPVMELTELPKCTVCLERMDESVNGVLTTLCN
HSFHSLCLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRH
AYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKMVQYGCEGETCHEEKIDAL
QLEYSYLLTSQLESQRIYWENKIVHLEKDTAEEINNMKAKFKETIDRCDNLERRLGELAK
DKQSMDKKCGQLSTRVTKLGQELKEEQEMNRCLRANQVQLQAQLAEEERKARETGERKDG
VIAELQEQLRDVMFYLETQQQIEGLPPETRTEIQEGHINIGAAATPAPGPSAIGRGRRGR
SKRGK
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagtgtatcactggtcgttatccgtctggagctcgcagaccagtctctctctccacag
gatttccaatacaccgccgctgaggatatgtccgaggaggatttgcaggagaaagctctg
ggctcagccaggctttctctgagtgggaagaccgagctggagagagcagcagtcctacac
cagcatatcggcagcagagccatgggagacatggtcatcgagaccttcgcacccaaccct
gataaaggaaaggttgagcagactggggcagagagagaggagggtggaggagcccgacct
ctagagaatcaaccagacgggagggaccctactgagggcactacaaatgagggcactaca
gagggcagtgccgatggcacagagatggctccagactcgccctcgaagcagcttccagac
cagatctccttcttcagtggaaacccctcagtggagatagtccacggcatcatgcacctc
tacaagaccaacaagatgacatcactgactgaggacgtgcgtcggagtgccatgctgtgt
atcctgaccgtcccctccaccatgaccagccacgacctcatgaagtttgtggcacctttt
tatgatgtcatggagcacatgaagatcatacgagactccacccctaaccagtatatggtg
ctgattaagttcagtagccaggctgatgcagatagtttctacacagcgtgtaatggccgt
acgttcaactccatagaggatgcagtctgccagctggtctatgtggagagagccgaggtc
atgaagtctgagcagggcgccagtcttccagtgatggagctgacagagcttcctaagtgt
accgtgtgtctggagaggatggacgagtcagtgaatggggttctcactacactctgtaac
cacagcttccacagcctgtgtctgcaacgctgggaggacgcctcgtgtcctgtgtgtcgg
tactgccagaccccagagcctgtagaggagaacaagtgctttgaatgtggagtacaggag
aacctgtggatctgtctgatctgtggtcatatcggctgtggtcgctacgtcagtcgtcat
gcctacaaacactttgaagagacgcaacacacttatgccatgcagctcactaaccaccgt
gtctgggactatgctggagataactatgttcacaggctggtggccagtaagactgatggg
aagatggttcagtatgggtgtgaaggagaaacctgccatgaggaaaagatagacgcactg
caattagagtactcttacctgctaacgagtcaactggagtcccagcgcatttactgggag
aataagatagttcacctggagaaggatacagcggaggagatcaacaacatgaaggccaaa
tttaaggagaccatagatcgctgtgataacctggagcgtcggctgggagagctggccaaa
gacaaacagagcatggacaagaagtgtggtcagctgtcgacccgtgtgacgaagcttggt
caggagttgaaggaggaacaggaaatgaaccgctgtctgcgagccaatcaggttcaacta
caggcccagctggccgaggaggagcgcaaggcaagagagacgggcgagcgtaaggacggg
gtgatagcagagctccaggagcagctgagagatgtgatgttttacctggagacccagcag
cagatagaaggtcttcctccagagaccaggactgagatacaggaaggacacatcaacatc
ggcgcagcagccactcccgccccaggaccctccgccataggcagaggccgcagggggcgg
tccaaaagggggaagtag

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