Coregonus clupeaformis (lake whitefish): 121582251
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Entry
121582251 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121582251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121582251
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121582251
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121582251
NCBI-ProteinID:
XP_041753859
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Position
15:complement(20710205..20779013)
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AA seq
784 aa
AA seq
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MDFSDQREMTKQPANAPTGFNPLHQPEGAVGVSANNPDNALNQTSAAYPAPQPAPSNESK
TFCPTENKPGEPGEVSKVYGTFKNAAPAVPGSVATNSAFCKDSTSSAGGSAARGIPVQYG
DPLRATGEQNNASGNWTTMSQTTIILGADGNTSVQPGAVTGEEDEDESGDENKARGNWTN
KLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFAS
QGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWN
TFDCKDKDMLLLDTCILHDKNFTSIKNSSFCLSAQAIGNLTKLVNMTYPDNKTYVSPSEE
YFKYNVLHISKGIEYPGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVL
VILLFRGVTLPGAGDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNK
FHNNCYRDTIIVCIVNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEA
LTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACF
FFLGFPMVTENGMYMLQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQP
NRFWRICWAFVTPTILTGILGLSLYQWKVMTYEDYTYPPWSMVMGWLMVLCSVIWIPIMF
VIKMYLAPGSFMERLKLVCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQL
GAYQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccgaccagagagagatgaccaaacagccggccaatgctcctaccggtttt
aacccgttgcaccagcccgagggagcggtgggagtttcagcaaataacccggataatgcc
cttaaccaaacgtccgccgcttacccggcccctcagccagcaccatctaacgagagcaaa
actttctgtcccacggaaaataaaccgggagaaccgggagaagtcagtaaagtctatggg
acttttaaaaacgccgctccggcggtgcctggatccgtggctacgaactcggccttctgt
aaggattctaccagctcagctggtggttctgctgcccggggtatccctgtccagtacggg
gacccgcttagggccaccggggagcaaaacaatgcatcgggcaactggaccaccatgagc
cagaccaccatcattctgggcgcagatggcaacacgtctgttcagcccggcgccgtgacg
ggggaggaagacgaggacgagagtggagatgagaataaggccaggggaaactggactaat
aaattggatttcatcctgtccatggttggctatgccgtgggactgggaaacgtgtggagg
tttccataccttgccttccaaaatggtggaggtgcttttttgattccctacctgataatg
ttgtgcctcgccgggatccctatatttttattggaggtttccctgggtcagtttgccagc
cagggcccggtgtccgtgtggaaagccatcccggctctgcaaggttgcgggattgccatg
ttgataatatctgtcttgatagccatatactataacattataatgtgctggacactgtac
tacctgttcgcttcgttgaagggctcactgccttgggctaactgtaagaacgagtggaac
acgtttgactgtaaggacaaagacatgcttctcttagacacgtgtatccttcatgataaa
aacttcacctctataaagaacagctcgttctgtctgtcggctcaagccattggaaacctg
accaaactggttaacatgacctatccggataacaaaacttatgtcagccccagcgaggag
tacttcaagtacaatgtcttacacatctccaaagggatagagtaccctggagacatccgc
tggcccctcgcaggctgcctgttgctggcctggttgatagtctacctctccctggccaaa
ggaatcaagtcatcagggaaagtggtgtatttcacagctacgttcccctatgtggttctg
gtcattctgttgttcagaggagtgaccctcccaggggctggtgacggcatcctctacttc
atcacaccaaagtgggagaaactcaatgatgctaaggtgtggaaggatgctgccacccag
atcttcttctctctgtcagcagcctggggaggcctcatcacactgtcctcttacaacaag
ttccataacaactgctacagggacaccatcatagtgtgcatagttaacagtgccaccagt
atatttgctgggttcgtcatcttctccgtcattggattcatggcccatgaactgaaggtg
cccattgagaaggtggcagatgaaggtccaggcatagcgttcgtggtgtacccggaggct
ctgaccagacttccactctctccgttctgggccatcatcttcttcctcatgctgctgacc
ctcggcctggataccatgtttgccaccattgagaccatagtgacgtctgtgtcagatgag
ttcccccagtacctgagaaagaacaagcctctcttcacgctcatttgctgtgcctgtttc
ttcttcctgggattccctatggtcacagagaatgggatgtacatgctccagttggtggac
acatacgctgcctcttactctctggtcatcattgccatctgtgagctgatcggaatctcc
tacttctatggcctgcagaggttctgcgaggacattgaaatgatgattggcttccaacca
aaccgcttctggagaatctgctgggcctttgtgactcctaccattctgactggtatcctg
gggctgagtctgtaccagtggaaggtgatgacctatgaggactacacctaccccccatgg
tcaatggtgatgggctggctgatggtgttgtgttctgtcatctggatcccaatcatgttt
gtcatcaaaatgtacttggccccaggcagcttcatggagcgtctgaagctggtgtgctcc
cctcagcccgactggggtcccttcctggcaaagcacagaggggagcgctacaagaacatg
atggacccccatggatccaactccctgggcctcaaactgccccccaaagatttccagctg
ggtgcctaccagtag
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