Coregonus clupeaformis (lake whitefish): 121582254
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Entry
121582254 CDS
T08357
Name
(RefSeq) src substrate cortactin-like isoform X1
KO
K06106
cortactin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121582254
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121582254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582254
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121582254
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121582254
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121582254
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121582254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
TMEM210
HGD-D
Motif
Other DBs
NCBI-GeneID:
121582254
NCBI-ProteinID:
XP_041753864
LinkDB
All DBs
Position
15:21031629..21048866
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AA seq
518 aa
AA seq
DB search
MWKAAAGQSVTVAVDDGGDDWETDPDFENDISEKEQRWGAKTVEGSGHQEHINIHQLREN
VSSEHSDLRQKEQATMPKASDGYGGKFGVQQDRMDKSAVGHEYQSKLSKHCSQTDTSKGF
GGKFGVQGDRVDKSAVGFDYAGKTEKHASQKDYSTGFGGKYGVQADRVDKTAMGFEYQGK
TEKHDSQKDYTKGFGGKFGVETDKVDKSALGFEYQGKTEKHESQKDYVKGFGGKFGVQTD
RQDKSALGWDHQEKLQLHESQKDYSHGFGGKFGVQKDRMDKSAGNFEDVEKPSPAYQRTK
PVETAGSSTGSIKARFENIAKQKEEEDKKRADEERTRRQAKEKQEQEEARRKIEETAKAK
PASPAPEPSPTIRPTPPAQQAAPSPVSAAADPVYQRKKKKDSGEYEDPAAAENGEELYEA
EPNSRPSAEQMYEEPPAQEEALYQSPDETGDAKTYEYGEDLGVTAVALYDYQAAGDDEIS
FDPDDIITNIEMIDEGWWRGVCRGAYGLFPANYVEVRQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggcagcagcaggtcagtccgttaccgtggcggtggatgatggaggtgacgac
tgggagacagacccagactttgagaatgacatttcagagaaggagcagcggtggggggcc
aagacggtggaaggctccggtcaccaggaacacattaatatccaccagctgcgtgagaac
gtgtcatcggagcacagtgacctgaggcagaaggagcaggccaccatgcccaaggcctcg
gacggctatgggggcaagtttggggtgcagcaggaccgcatggacaagtctgcggtgggc
catgagtaccagagtaagctgtccaagcactgctctcagacagacacatccaaaggcttc
ggggggaagtttggagtgcagggcgaccgcgtcgacaagtccgctgttgggtttgactat
gccgggaagactgagaaacacgcgtcgcagaaagactactccacagggtttggggggaaa
tacggggtgcaggcagaccgcgtggacaagacagcaatgggctttgaataccagggcaaa
acggaaaaacacgactcccagaaagattacaccaaaggttttggcgggaagttcggagtg
gagacggacaaggtggacaagagcgccttgggctttgagtaccagggcaaaacagagaag
cacgagtctcagaaagattacgtgaagggctttggtggcaagtttggcgtgcagacggac
agacaggacaagtcagccttgggatgggaccaccaggagaaactgcagctccacgagtca
cagaaagactactcccatgggttcggagggaagtttggcgtccagaaggacagaatggat
aagagtgcaggtaactttgaggatgtggagaaaccaagccctgcctaccagaggaccaag
cctgtggaaactgctggcagcagcacgggcagcatcaaggcccgcttcgagaacatcgcc
aagcagaaggaggaggaggacaagaagcgggcggatgaggagagaacccgccgccaggcc
aaggagaagcaggagcaagaggaggcgcggcgcaagatagaggagacagccaaggccaag
cctgcctccccggctcctgagcccagccctaccattcgccccacccctcctgcccagcaa
gccgcaccttcgcctgtatctgcagccgccgacccagtttaccagaggaagaaaaagaag
gactctggtgagtacgaggatcctgcagcagcggagaatggggaggagctgtacgaggca
gagcctaactcccggccctctgccgagcagatgtatgaggagcctcccgcccaggaggag
gcgctataccagagtcctgacgagacaggagacgccaagacatatgagtacggggaggac
ttgggggtaaccgcagtggccctgtatgactaccaagcagctggtgatgacgagatctcc
ttcgaccctgatgacatcatcactaacattgagatgattgacgagggctggtggaggggc
gtgtgccggggagcctacggcctcttcccagccaattacgttgaggttcggcaatga
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