Coregonus clupeaformis (lake whitefish): 121582270
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Entry
121582270 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-4-like
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121582270
04082 Neuroactive ligand signaling
121582270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121582270
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121582270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
121582270
NCBI-ProteinID:
XP_045071975
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MTRTLTLLAFLFTFIKCGSCADSEERLMNWLLGKDRYNKLIRPAVNRNERVTVILQVSLA
QLISVNEREQIMTTNVWLTQHWDDYRLSWDPSQYDGIDKLRIPSRHIWLPDIVLYNNADG
TYEVTVFTNAIVQFNGSIFWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTELDL
VLKSGVASMDDFTPSGEWDILALPGRRTVNLLDPTYVDLTYDFIIKRKPLFYTINLIIPC
VLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTM
VLVTFSIITSVCVLNVHHRSPSTHTMPSWVKVVFLNKLPHLLFMRRPQNNSARQRLRQQR
RLQARRSILADLGYPATATSKTAKAATAMSSSSASAFSSLGHFYNKVAAPLGYTHTFRKG
EACSTEFLPNSFPSSQDLRQRGSPDWGGDVQDAVDGVRFVADHMMGDDDDQNVIEDWKYV
AMVVDRMFLWIFIIVCVTGTLGLFLQPLFQHSIVPIQQPSSDTPRT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacacggactctcactctccttgctttccttttcacttttataaaatgtggcagctgt
gcggactcagaggagcgtctgatgaactggctgctgggaaaggatcgctacaacaagctg
atccgcccagccgtaaacagaaacgagcgcgtcactgtcatactacaggtgtccctggcc
caactcatcagtgtgaatgaaagagagcagattatgaccaccaacgtttggctcacacag
cactgggatgactacaggctatcatgggacccttctcaatatgatggcattgacaagctt
cgtattccttccagacacatctggctacctgatattgtgctctataacaatgcggatgga
acctatgaggtaacagtctttaccaatgccattgtccagttcaacggcagcatcttctgg
ctccctccggccatctataagagtgcctgcaagatcgaggtcaagcacttcccctttgac
cagcagaactgcacgctcaagttccggtcgtggacctacgaccacactgagctcgatctg
gtcctgaagtcaggggtggccagcatggacgacttcacgcccagtggggaatgggacatc
ttggccctgccgggcaggcggacggttaatcttctggatcctacctacgtagatctcacc
tatgacttcatcatcaagaggaagccgctgttctacaccatcaacctgatcatcccctgt
gtcctcatcacctctctggccatcctggtcttctacctgccatctgactgtggggagaag
atgactctgtgtatctcagtcctcctggccctcactgtgttcctcctcctgatctccaag
atcgtccctcccacctcgctggacgtgcctctgattgggaagtacctgatgttcaccatg
gtgctggtgaccttctccatcatcaccagtgtgtgtgtgctcaacgtgcaccaccgctcc
cccagcacacacaccatgccctcctgggtcaaggtagtgttcctcaacaagctgccccat
ctgctcttcatgagacgcccccagaataactcggcccgccagcggctgcgccagcagaga
cgactccaagctcgcaggtccatcctggcggacctgggctaccctgccaccgccacgtcc
aaaacagccaaagctgccactgccatgtcttcctcctctgcctcagccttctcctccctg
ggacacttttacaacaaagtcgcagctccgctggggtacacacacaccttcaggaagggg
gaggcctgctccactgagttcctgcccaacagcttcccctcctcccaggacctccgccag
agaggcagcccagactgggggggagatgtccaggatgcagtggacggggtccgcttcgtg
gctgatcacatgatgggggacgacgatgaccagaatgtgattgaggactggaagtatgtg
gccatggttgtggaccgtatgttcctgtggatctttataatagtgtgtgtgactggaacc
ctgggtctcttcctccagcctctgtttcagcattcaatagtccccatccagcagcccagc
tcagacacaccccgtacctga
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