Coregonus clupeaformis (lake whitefish): 121582331
Help
Entry
121582331 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121582331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582331
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121582331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
121582331
NCBI-ProteinID:
XP_041753982
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KEIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSHQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIISQEQVDAILTLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENASSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPEAEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggatgagcaggaaaagctacttgatgaagccgtg
caagctgtcaaggtccagtcatttcagatgaagcgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggggaactcaggacctccatgttatctcca
aagagctactatgaactctacatggccatctctgacgagctccactacctggaggtgtac
ctgacagatgagtttgccaagggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccccagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcgcgtaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctgttcctcagaaactacctgctgcagtgcacccgcaacatc
ttgcctgacgacggggagcagctagaaggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgctgctgaactttgctgagatgaataagctgtgggtgcgcatgcag
caccagggccacagccgagacagggagaagagggagaaggagaggcaggagctgcgcatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggaaaagtat
aaagagattgtgctgtccggtgtcctagagcaggtggtaaactgcagagattccctggct
caagaatatctaatggagtgcattattcaggttttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgtcaaaaacatc
atcatcgctctcattgatagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccatcaagtagccacagttatacagtcc
cgccaggacatgccttcggaggatgtggtctcactacaggtgtccctcatcaacctggcc
atgaagtgctaccctgaccgggtggactatgtggacaaggtgttggagagcacagtggag
atcttcaacaagctcaacctggagcacattgcaaccagtagcgcggtctcgaaagagttg
actaggctgctgaagatcccagtggacacctacaacaacattctgactgttctgcagctt
aagcacttccctccactcttcgagtactttgattatgagtcccgcaaaagcatgagctgt
tacgttctgagcaacactctggactacaacaccaccattatatcccaggagcaggtggat
gccatcctgaccctggtgtcgacacttatccaggaccagccagaccagcccgctgaagac
ccagacccagaggactttgctgaggagcagagccttgtgggtcgcttcatccatctgctg
ctttccgacgaccctgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgcttgtgtttgctgcctatcag
ctggctttccgctacaaagagaacgcttcatcagatgataaatgggagaagaagtgccag
aagatcttctcgtttgcccaccaaaccatcagtgctctgatcaaggctgagctggctgag
ctgcccctcagactcttcctacagggggcgctggccgcaggagagattggcttcgagaac
cacgagactgtggcctacgagttcatgtcacaggccttctccctgtatgaggatgagatc
agcgactccaaggctcagctagcagccatcacgctgatcatcggcacatttgagagaaca
aaatgcttcagcgaggagaaccacgagcctctgaggacacagtgtgcactcgccgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcgtgacgggaaaagggtgatggag
tgcttaaagaaggccctgaaaattgccaaccagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaacagatacgtctgtttctacgaaagagagaatgatgcggtg
acggtccaggttctgaaccagctgatccagaagatcagagaggacctgccaaacctggag
gccagcgaggagacggagcagatcaacaaacacttccacaacacactggagcacctgcgt
ctgcagagagagtcgccggaggccgaggggcctgcttatgagggcctggtgctgtag
DBGET
integrated database retrieval system
