Coregonus clupeaformis (lake whitefish): 121582333
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Entry
121582333 CDS
T08357
Symbol
gdnfa
Name
(RefSeq) glial cell line-derived neurotrophic factor
KO
K05452
glial cell derived neurotrophic factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121582333 (gdnfa)
04020 Calcium signaling pathway
121582333 (gdnfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121582333 (gdnfa)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121582333 (gdnfa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
LEAP-2
Motif
Other DBs
NCBI-GeneID:
121582333
NCBI-ProteinID:
XP_041753986
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Position
15:complement(45214749..45224173)
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AA seq
266 aa
AA seq
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MKLWDVLATCLLLLSSVSTRPLYQNLQPAKRAHYSDWYSDSLSLSVEEPEPEFQSESHSL
QEISMEDKYDITGPYPDQFDDVMDFIKATIGRLRRSSEPTGGSRGRREQREQERQRGAAN
TDRGGGEGRGEGRGGRARGGRAEKKKGRGRGGKGRSSERGGQRTKPVEGRGCLLKEVHLN
VTDLGLGYQTKEELIFRYCSGPCSDAETNYDKILNNLTHNKKLVKDIPSRTCCRPITFDD
DLSFLDDNNEDYHILQKHSARKCGCV
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatgggatgttttggccacgtgtttgttgctcctgagctccgtctccacacgc
cccctctaccaaaaccttcagccagccaagagagctcactactcggattggtacagtgat
tctctgtccctgtctgtggaggaaccagagccagagttccagtcagagtctcacagcctg
caggaaatctccatggaggataaatatgatatcacaggcccatatccggaccagtttgat
gatgtgatggattttatcaaggctaccattggcagactgaggagatcatcagagcccacc
ggcggctcaaggggaaggagggagcagagagagcaggagagacagagaggagcagcaaac
acagaccgaggaggaggagaaggaagaggagaggggagaggaggacgggcgagaggagga
cgcgcagagaagaagaagggtcgggggcgagggggcaaagggaggagcagtgaaagaggg
gggcagcggacgaagccggttgaaggccgtggctgcttgctaaaagaggtccatctcaac
gtaacagacttaggtctgggctaccagaccaaagaggagctgatcttccggtactgcagc
ggcccctgttcggacgcagagaccaactatgacaagatcctcaacaacctcacccacaac
aagaagctggtcaaggacataccttcccgcacctgctgtcgaccaatcacctttgatgat
gacctgtcattcctggatgacaacaacgaggactaccacattctgcagaagcattccgcc
cgcaaatgtggttgtgtttga
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