Coregonus clupeaformis (lake whitefish): 121582340
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Entry
121582340 CDS
T08357
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121582340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582340
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121582340
Endosome - Golgi transport
Arf GTPase associated proteins
121582340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
Talin_IBS2B
Ank_3
TTRAP
DUF7783
Motif
Other DBs
NCBI-GeneID:
121582340
NCBI-ProteinID:
XP_045081112
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Position
15:45003764..45028887
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AA seq
750 aa
AA seq
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MSKRLRNRDCQVCADCSAPGPCWASVNRGVLVCDECCSIHRGLGRHSSQVRHLTHTPWPP
SQLQMVQTLYSNGSNSIWEHCLLDPSSISSGKRKANPQDRVHPHKTEFIKAKYQMLAYVH
RLPCREDDSVTTKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAG
QVSQAELLAVYGADPDALDMGGKTPIDYARQAGHQELADRLVEIQYELTDRLAFYLCGRR
PDHRNGQHFIIPQMADRNVSLDLSEFAKAAKKKLQSLTNHQFEELAMDVYDEVDRRETDA
VWLVTQNHSTLVTDTTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILTDAKRR
QRGNSCKSPREDIELILKGISSRHGSESQDNEDQPDYDSVASDEDPEREPASGNNGKDGR
TKSSESSDLSDGPITLHEFMEVKSALTASETKIQQLLKVNCHLSEELRLMQSKLNSMQTE
KSSLRWQTPSGQQHPQDLSGRPPVPGGRPMSMYETGSAMRQYPHRGEPPRRDDGLTLQPL
PTNIGRGPLGTASSSLPTFPSSLSWSWDERARRGCSLEGQSSMLESDYDNTPKYTGLESG
MGRNSSWLGDGSTAEQGEREDETEADSTLPCTEDVICKTEQITKNIQELLRAAQENKHES
FVPCSERIHVAVREMATLFPKRPYSDTVRGSLRLLTSSASRLQGECQKATPHDPCPSDMQ
LVTQQVIQCAYDIAKAAKQLVTVTTKENSN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggctgcgcaacagagactgtcaggtctgcgctgattgtagcgccccgggc
ccatgctgggcctcagtgaacaggggtgtgctggtctgtgatgagtgctgcagcatccac
cggggtctgggccgacacagttcccaagtccgacacttgacccatactccatggcccccc
tcccagctacagatggttcagacattgtacagcaatgggtccaactccatctgggagcac
tgccttctggatccctcatctatctcgagtgggaaacgcaaggccaacccccaggacaga
gtccatccccataaaacggagttcatcaaggccaaatatcagatgctggcttatgtccat
cggctgccctgtcgagaggatgacagtgtcactacgaaggacctcagtaagcaactccac
tccagtgttcggactgggaacctggagacgtgcctgagactgttgtctttgggagcccag
gccaacttcttccacccagaaaaaggaaacactccgctgcatgtagcagctaaggcaggc
caggtgtcacaggcagagctgctggctgtgtatggggcggatcccgatgccctagacatg
gggggtaagacccctattgactacgcaagacaagcagggcaccaggagctggcagacaga
ctggtagagatccaatatgaactcaccgaccgcctggcattttacctctgtggaagaagg
ccagatcataggaatggacaacacttcataatcccacaaatggctgacagaaatgtcagt
ctggatttgtcagaatttgcaaaagctgcaaagaaaaaactccagtctctcactaaccat
cagtttgaagagcttgccatggatgtttatgatgaagtggacagaagagaaactgatgca
gtgtggctggtgactcagaaccatagcactctggtaacagacacaactgtggtgcctttc
ctccctgtcaaccctgagtactcatccaccagaaaccagggccggcagaagctagcgagg
ttcaatgcacatgaatttgcaacactcgtcattgatatattaactgacgccaaacgtcgg
caacgggggaactcctgtaaaagtccaagagaggacatagagctcatcctgaagggaatc
agcagccgtcatgggagtgagagccaggataatgaagaccagccagattatgacagtgtg
gcatctgatgaagatccagagcgggaaccagcctctgggaacaatgggaaagatggcagg
accaagagctctgagtcgtcggacttgtctgatgggcccatcacattacatgagttcatg
gaggtgaagagcgccctcacggcctccgagaccaagatacagcagctgctcaaggtcaac
tgtcacctgagtgaggagctccggttgatgcagagcaagctgaactccatgcagactgag
aagtcttccctgcgatggcagacacccagtggccagcagcaccctcaggacctctccggc
cgcccccctgtccccggaggccgccccatgtccatgtacgagacgggctcggccatgagg
cagtatccccacaggggcgagccccctcgtcgtgacgacggcctcactctccagcccctc
cctacaaacattgggaggggtcctttggggaccgcctcgtcctccctccctaccttcccc
tcctccctgtcctggtcgtgggacgagcgagctcgaaggggttgcagcctggagggacag
agcagcatgctggagagtgactatgacaacacaccaaagtacacaggactggagtctggt
atgggcaggaacagcagttggctgggtgatggcagtacagcagagcagggtgagagggag
gatgagactgaggctgactccaccctgccctgcaccgaggacgtcatctgtaagacagag
cagatcaccaagaacatccaggagctgctgagggccgcacaggagaacaaacacgagagc
tttgtaccatgctcagaaaggatccatgtggctgtgagagagatggccaccctgtttcct
aagaggccttactcagacacagtgcgagggtctctgcggctgctcacctctagtgccagc
cggctccagggggagtgccagaaggccacgccccacgacccttgcccctccgacatgcag
ctggtcacgcagcaggtcatccagtgtgcctatgacattgccaaggctgccaagcaactc
gtcactgtgacaaccaaagaaaacagcaactga
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