Coregonus clupeaformis (lake whitefish): 121582349
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Entry
121582349 CDS
T08357
Name
(RefSeq) coronin-1C-A-like isoform X1
KO
K13886
coronin-1B/1C/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121582349
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121582349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_Prp19
WD40_4
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR35_TULP_N
EIF3I
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
Methyltransf_15
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
121582349
NCBI-ProteinID:
XP_041754011
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Position
15:complement(44187894..44215200)
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AA seq
930 aa
AA seq
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MSKKEVNVNVPTRSAPKMPQLITALSSYLLEQCNVIPSPSLSVPTLEDSDGQRQVVSMQR
ESQPVCYTAVITPPPIIHLLPEREMESTVPTQQNNSMDFTQTEDKATSGASIDPSVRGER
LKPKGPPPPVPKKPQNPFVKIPAAKTCSLDEQKIGDDYHHKEEKKKSRRHSHQVNKENAC
DTAPHDVCVLWDNTGAAYTVPSNMYTPDNFYPMDDFSQRQRTPTREEKYRNIIDFDAWAQ
MVKRAAEEEEPKQLHMLAGQPFLEKQAKLKGPPPPVPKKPQKPFVQLETVAISEDIAWPS
DDEEIRELELALCKRMEYDDDDDDDDPEPQADTVSTDVCWKNFGDHSDSRIHSGLVERSY
RDTVSEHETETYRPVAALIKETNQMHQMIRHADRTKPLVAKSMIRHADRTKPLTAMSIAG
AVDQGQSLKVSQMKKAFDVTKKPAEKPPESEPKKDMFRRVVRASKFRHVFGQAVKNDQCY
DDIRVSRVTWDSSFCAVNPKFVAIIIEASGGGAFLVLPLLKTGRIDKAYPTVCGHTGPVL
DIDWCPHNDHVIASGSEDCTVMVWQIPENGLVTPLAEPVVVLEGHSKRVGIVTWHPTARN
VLMSAGCDNLIIIWNVGTGEAMIQLEDMHPDVIFSACWSRNGALICTACKDKKIRVIDPR
KEKIVAEKDKAHDGARPMRAIFLADGNIFTTGFSRMSERQLALWNPKSMEEPISVHELDT
SNGVLLPFYDADTNVVYLCGKGDSSIRYFEITDEAPFVHYLNTFSSKEPQRGMGYMPKRG
LDVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQDDLYPDTAGPDCTIEAEDWFDGKNGE
PILISLKNGYVPGKNRDLKVVKKSNVLEGKPAKKAENTSPAQSKASPQPSTQNEGKLEEL
LREVKSLRDLVTLQDRRIAKLEDQISKVAI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaagaggtcaacgttaatgtccccactcgctctgcccccaagatgccacaa
ctcataactgccttgtcctcatacttattagaacaatgcaatgtgattccctcaccttct
ctgtctgtgccaactttagaggacagtgatgggcagaggcaggttgttagcatgcagagg
gagagccagcctgtctgttacactgctgtcatcaccccaccacccatcattcaccttctg
cctgagagggaaatggagagcacagtgccaacacaacaaaacaacagtatggatttcacc
cagacagaggacaaagcgacctcaggtgcctctatagatccttctgttcgaggggagagg
cttaaaccaaaggggcctcctccacctgtcccaaaaaagccccaaaatcccttcgttaag
attccagctgcaaaaacatgctctttggatgagcagaagataggtgatgattaccaccac
aaagaggagaagaagaagagcaggagacattcgcatcaagtcaacaaggaaaatgcttgt
gacacagctcctcacgacgtgtgtgtgttatgggacaacacaggtgctgcttacactgta
ccatccaacatgtacacgccagataatttttatccaatggacgatttttcacaacgacaa
aggacaccaactagagaggaaaagtatagaaatattatagattttgatgcttgggcacaa
atggtcaaacgtgctgcagaagaggaggaaccaaaacaacttcacatgttggccggacaa
ccttttttggaaaagcaggctaaactcaaaggtccaccacctcctgtaccaaaaaagccc
caaaagccatttgttcaattagaaacggttgcaatctcagaagacatagcttggccttca
gatgacgaggagatacgagaactagagctggccttgtgtaagagaatggaatatgatgat
gatgatgatgatgatgaccctgaaccccaagctgacacggtcagcacagatgtctgttgg
aagaactttggtgaccacagtgacagtagaatccatagtggtcttgttgagcgtagttat
cgtgatactgtgtctgagcatgaaactgagacatacaggcctgtggctgcgctcataaag
gagaccaaccagatgcaccagatgatcagacatgcagaccggacaaaaccccttgtggcc
aagtctatgatcagacacgcagaccggacaaaaccgctcacggccatgtccattgccggg
gctgtggaccagggccagagcctgaaagtatcacagatgaagaaggcctttgatgtcact
aagaagcctgctgaaaaaccaccagagtctgaacccaaaaaagatatgttcaggcgagtg
gtgcgagcgagtaagttccgtcatgtctttggccaggcggtgaagaacgaccagtgctat
gacgacatccgtgtctcgcgggtcacatgggacagctccttctgtgccgtcaatcccaaa
tttgtcgccatcatcatcgaagccagtgggggcggagccttcctcgtcctccctctgcta
aagacaggtcgcatagacaaggcctacccaacagtatgtggtcatacaggtcctgtcctg
gacattgactggtgccctcacaatgaccacgtcatcgccagcggctcggaggactgcaca
gtcatggtgtggcagatcccagagaatgggctggtcaccccgctggctgagcctgtggtg
gtgttggagggacactccaagagggtgggcatcgtcacctggcaccccactgcccggaat
gtcctcatgagtgcaggctgtgacaacctgatcatcatctggaacgtgggcacgggcgag
gccatgatccagctggaggacatgcaccctgacgtcatcttcagcgcctgctggagccgc
aacggagccctcatctgcaccgcctgcaaggacaaaaagatccgcgtaatcgacccccgc
aaggagaagattgtggcggagaaggacaaggcccacgatggagcacggcccatgagagcc
atcttcctggctgacggaaacatcttcaccaccggcttcagccgtatgagtgaacggcag
ctagccctctggaaccccaaaagcatggaggaaccaatatcagtccacgagctggacacc
agtaatggagtgttgctgcccttctacgatgcagacaccaacgtagtgtacctgtgtggg
aagggtgacagtagcatccggtactttgagatcacggacgaggctccattcgtgcactac
ctcaacaccttctccagcaaggagccccagaggggtatggggtacatgcccaaacgagga
ctggatgtcaacaagtgtgagattgccaggttttataaactgcatgagagaaagtgtgag
ccgatcatcatgacagtcccccgaaagtcggacctcttccaggatgacctgtacccggac
acagcgggaccagactgtaccatcgaggcggaagactggtttgatgggaagaacggtgag
cctatcctgatctccctgaaaaacggctatgtccccggaaagaaccgtgacctcaaggtg
gtcaagaagtccaacgtcctggagggaaaacccgccaagaaagcagagaacacctcacct
gcccagagcaaggcctctccacaaccctctacacaaaatgaagggaaactggaggagcta
ctgcgagaggtcaagtcgctcagggacctcgtcaccctacaggaccgccgaattgccaaa
ctggaggaccagatctccaaggttgccatctaa
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