Coregonus clupeaformis (lake whitefish): 121582352
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Entry
121582352 CDS
T08357
Name
(RefSeq) unconventional myosin-Ih isoform X1
KO
K10356
myosin I
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121582352
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121582352
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582352
03036 Chromosome and associated proteins [BR:
cclu03036
]
121582352
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121582352
04147 Exosome [BR:
cclu04147
]
121582352
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121582352
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Others
121582352
Others
Actin-binding proteins
Myosins
121582352
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121582352
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121582352
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121582352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Zeta_toxin
AAA_22
PhoH
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121582352
NCBI-ProteinID:
XP_041754016
LinkDB
All DBs
Position
15:44268191..44286237
Genome browser
AA seq
1049 aa
AA seq
DB search
MYMFSTSLEERCNRILRDMEGTLTARDRVGIQDFVLLDAYTSESAVLDNLRKRFNENLIY
TYIGTLLVSVNPYKELGIYTKKQMDIYMGVNFFELPPHVYALADNVYRTMLTETNNHFIL
ISGESGAGKTEASKKILQFYAVSCPSTKLLDNVRDRLLLSNPVLEAFGNAKTLKNDNSSR
FGKYMDIQFDHMGGAVGGHILSYLLEKSRVVHQNHGERNFHIFYQLVEGGEEDMLRWLGL
ERNCQHYSYLVQVGEGECAKVSSINDKSDWKMVRKALSVIEFSESNIESLFAIIASVLHL
GNVKFVADSQGYATLNNSPEIHWLSKLLGIPAQVIQVGLTHRKIEARSEELLSPFTVDHA
VYARDALAKAIYGRTFTWLVNKLNESLANKDSSRKTVIGLLDIYGFEVFKMNSFEQFCIN
YCNEKLQQLFIQLTLKSEQEEYEMEGIDWEPVPYFNNKIICDLVEEKFKGIISVLDEECL
RPGEATDMTFLEKLEEKMGGHPHFVTHKLADQKTRKTLERGDFRLLHYAGEVTYCVVGFL
DKNNDLLYRNIKEVMRQSKNAIVKHCFPTTEPDSKKRPETVATQFKSSLVGLTEILMSKE
PWYVRCMKPNEGKQPGRFDDVLVRHQVKYLGLMEHLRVRRAGFAYRRRYEIFLQRYKPLC
PDTWPNWKGTAAEGVECLIKHLGYKPDEYKMGRTKIFIRHPRTLFATEDAFEVCKHELAT
RIQAKYKGYRVKGHYMRQRQAATKIETCWRGMKARREREKRAWAVKVIKRFIKGFMTRNQ
PACVDNTEYLAFVRQNYLTRLKENLPKTVLDKNTWLTPPPIMQEASQMLRKLYTRHMVRK
YVHGIMTERKAQLHIKGMTSSLFKGRKENYPHSVGIPFMDTRISEEDIHIKVYQMIRQER
IKYSVPVVKYDRNGFRPRFRQLIYTGTAAYLVEEAKIKQRVEFNNLKGVSVSNLSDNFLI
LHVQCEDIKQKGDLVLQCDYLFEALTKLCLVANKHNFIKVVQGSVKFDIQPGREGFVDFK
SGQETMIYRAKNGHLMVESTRTKSRSMIN
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgttctcaacgagcctggaggagcgctgtaaccggatcctccgggacatggag
ggtacccttacagcccgggatcgcgtgggcatccaggattttgttttgctggacgcctac
accagtgagagtgccgtcctggacaacttgaggaaacgcttcaacgagaacctcatttac
acctacattggtacgctcttagtgtcagtcaacccctacaaagagctgggaatctacacc
aagaagcagatggatatttacatgggcgtcaacttctttgagcttccaccccacgtctac
gccctggcagacaatgtctaccgcaccatgttaacagagaccaacaaccacttcatcttg
atctcaggggagagtggagcagggaagacggaggcctccaagaagatcctgcagttctac
gctgtcagctgccccagtaccaaactgctggacaacgtccgagaccgactgctgctctcc
aaccctgtgctcgaggctttcggaaatgccaaaaccctgaagaatgacaactcaagccgc
tttgggaagtacatggatattcagtttgatcacatggggggagctgttggtggccacatc
ctcagttatctactggagaagtcccgggtggtacatcagaaccatggagagagaaacttc
cacattttctaccagctagtggagggaggagaggaggacatgctacgctggctgggtctg
gagaggaactgtcaacactatagctacctggtacaggtgggagagggggaatgtgccaaa
gtcagctcaatcaacgacaagagtgactggaagatggtacggaaagccctcagtgtcata
gagttcagtgagagcaatatagagagcctgtttgcaatcattgctagcgtacttcacctg
ggaaatgttaagtttgtggctgactcacagggatacgccactctcaacaacagtccagag
atacattggctgtccaagttgctgggcattcctgcacaggtgatacaggtgggtttgacc
cacaggaagattgaggccaggtcagaagagttgctcagtcccttcaccgttgaccatgca
gtatacgccagggacgctctagccaaagccatctatggccgcaccttcacctggctggtt
aacaagctcaatgagtctttagcaaacaaggattcctccaggaagacagtgattggtctg
cttgacatctatgggtttgaggtgttcaaaatgaacagctttgagcagttctgcatcaac
tactgtaacgagaaactgcagcagctcttcatccagctcaccctgaagtcagagcaggag
gagtacgagatggaggggattgactgggagccagtgccatacttcaacaacaagatcatc
tgtgacctggtggaggagaaattcaaaggcatcatttcagtgctagacgaggagtgtcta
cgtccgggagaggccacagacatgaccttcctggagaagctggaggagaagatgggaggt
cacccccatttcgtcacacacaagctggctgaccagaagacccggaagactctggaacga
ggagacttccgcctcttacactacgcaggggaagtcacatactgtgtggtcggattcctg
gacaaaaataatgatctcctgtacaggaacattaaagaggttatgcgccagtctaagaat
gccattgttaaacactgctttcccaccactgagccggacagcaagaagagacctgaaaca
gtggccactcagtttaagagcagtctggtaggcctgactgagatcctcatgtctaaagag
ccctggtacgtccgctgtatgaagcctaatgaaggcaagcagccagggcgctttgacgat
gtgttggtgagacaccaggtgaagtacctggggctgatggagcacctgagggtcagacgg
gccggctttgcttaccgccggagatatgagatcttcctgcagaggtacaagcccctgtgt
ccagacacctggcctaactggaaaggtacagccgcagagggggtggagtgcctgatcaag
cacctgggctacaagcctgatgagtacaagatgggaaggaccaagatctttatccggcat
cccaggactctgtttgccaccgaagacgcctttgaggtctgcaagcatgagctggctaca
aggatccaggcaaagtacaaaggctacagagtgaagggacactacatgagacagaggcaa
gcagctacaaagattgagacatgctggagaggcatgaaggccaggagagagagggagaag
agagcctgggctgtcaaggtcattaagaggttcatcaagggcttcatgactagaaatcag
ccagcctgtgttgacaacacagagtacctggcgtttgtcaggcaaaactacctcacacgg
ctcaaggagaatctacccaaaacagtcctggacaagaacacctggctaacccctcctccc
attatgcaggaggcctcacagatgttgaggaaactctacaccaggcacatggtacggaag
tacgtacacggaatcatgacagagaggaaagcacagttgcatatcaaaggaatgaccagt
tccttattcaaaggaagaaaagagaactaccctcacagtgtgggcataccattcatggac
accaggataagtgaggaagacatccacattaaagtctaccagatgattaggcaagaacgc
atcaagtacagtgttcctgtggtgaagtacgacaggaatggcttcaggcctcgtttcaga
cagctgatctacactggaactgcagcctacctggtggaggaggccaagatcaaacagcgg
gtcgagttcaacaacctcaaaggtgtgtcagtcagcaacctgagtgacaacttcctgatc
ctccatgtccaatgtgaggatatcaagcaaaagggggacctggtgctgcagtgtgactac
ctgtttgaggccttgaccaagttgtgtctggtggccaacaagcacaattttatcaaagta
gtccagggcagtgtaaagttcgacatccagccgggcagagaggggtttgttgacttcaag
agtggccaggagaccatgatttacagagcaaagaatggccatctgatggtggaatcaact
cgaacaaagtcccggtcaatgataaattga
DBGET
integrated database retrieval system
