Coregonus clupeaformis (lake whitefish): 121582382
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Entry
121582382 CDS
T08357
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121582382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582382
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121582382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
121582382
NCBI-ProteinID:
XP_041754058
LinkDB
All DBs
Position
15:complement(43601965..43627009)
Genome browser
AA seq
1589 aa
AA seq
DB search
MSLSDQSQQWYPTSVQVTVLQARSLRIKGKNGTNDAYAIMQVAKDKFSTSVVEKSVAPVW
KEEATFELPLFHNGNAEKCTLHVHVMHRALVGPDKLLGHAVINLLELSEVTSRNKTEWHK
LLDKAGKPDKDRGEVLVDIQFMKNNLTASMFDLSATDKPRSRLGKFKDKVRGKKKEGLSD
SASAVVPSFTQVLTDSEGEGEGGADKGEKKKKNNLKSLFSPKSNLQRHGLSQSMSVLGPL
PEKNSSLSGSRSSGLNVDSSEGKNKFKFLTHKRTGSSDSKASQGSLSLGRSKVPAPLAEQ
SNLCINGSHVYTEEPQSRSARTGSTFSLASSGRGSMEDLRRAQGRKSSSTSMDSLTALKQ
PSPWAEEEEEEEERFKMGEEMKRKEEQERKKLEEEEGMRKEEQEKRRIGEEEERLRFEEE
RIRIEEEKMRFEEEEKRRKEEQENRKRIEEENIRVEDESRMMEEEERKRRLKEEGEERVK
KKEQEMSRLEEEIEEQERWEEEERMKREDSLRKEDERKMREVEEEEERVKEEEERIRREQ
AEDMQRREERERKMREEEERVKREQDRLRKEEERRMREEEERVRKAEEDDGLREEERRMR
EEEERVKQEQDRLRKEEERRMREEEERVRKAEEDDRLREEERRMREEEERVKQEQDRLRK
EEERRMREEEERVRKAEEDDRLREEERRMREEEERVKREQDRLRKEEEERKIREEEERVR
KADEEDRLREEHRRMREEEERVTREQDRLRKEEEERKIREEEEMLRREEEDDMQRKEEEQ
RKIREEEKIIKMLEEERLRKEEAERVRLEEERENEQERRRDKEQRELMEAKERFRVEEEN
MKKEELRQEERMREEEKRRNAQMEEEKESVPLEEVEKQMEQNSEAKATLCNNPFEEVSPT
SSFDDTSSNNLFEESPMTSSTGPISCRINKGSAVKPRPSSWGNPSKPVISSNPFLSSSSP
ELESSMDSPRGDGETRDAIDPSTELMEKKVPTPLAPNKQRWARKDNWSSKAKSHCATPKL
TKTKPTKPPPPLRRHSSTSLVGSWDDQGSVSGKDHSSVRQDKGPAPLPPDNQRWARKDNW
PSKSNPDSANSTLTQIKPTKPHPPPRRNSATSMVGSEHDQHLNESVSQDDSSVRRDKRPA
PLPPDRPNQAPSETQRDQSMTSVNQGHKDRVGASMSKVSQRVVQMITPLTSSSTATTEHI
SGGQSSSHHGNQAGESMPSAIGGLIVAKHNKGPAPSRPQHPPGKTMPKADVLDEQSNTDE
HESSVEFEFDPNNPFAEDCRMEKSSGRGEEQSLTGERQESLDSHNQQSCTSTDADLGLFQ
KSVVGDTTELPTPDVLPAEDGSCPNKSTSAKRVRAPLPPVKKTSTFREEGTGKQSSGKLQ
SPGAPTSSKLSSGISVKTQSGGVGVALPCVTVAQPPCVPSPAPSSLPHPEPLKGSGGRRD
CPPQTTSSVPGQKTLLHAGALPSIAEQCSGEEAGGSGDRPASSTRRPHPVKPLRSLENQP
ASDIQEGQAGKSTRILGGLQEKMKGKDTGVKGPYSQLTQEELISLVVKQQEQLSKRDDKI
KELEQYIDNLLVRIIEEQPSILMSMNSLK
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcggaccaaagccaacagtggtatcccaccagcgtacaggtaactgtgctt
caggcaagaagcctgaggataaagggaaaaaatggcaccaacgacgcatacgccatcatg
caagtggccaaggataaattctctacatcggtggtagaaaagagcgtggcaccggtgtgg
aaagaggaggccacgttcgagctgccgctcttccacaacggtaacgcagagaagtgtacg
ttgcacgtccacgtaatgcaccgggctctcgtgggaccggacaagttgctcgggcacgca
gtcatcaacctgttggagctcagcgaggttacatcccgcaataagactgaatggcataag
ctgttggacaaggcaggcaagccagacaaagacaggggagaggtgctagtggacatccag
tttatgaagaataacctgacagccagcatgttcgacctctctgctacagacaagccgcgc
tcccgcctgggcaagttcaaggacaaggttcgaggcaagaagaaggagggtctgtcggac
tctgcgtctgccgtggtgccgtccttcacccaggttctgacggacagcgagggagagggg
gaagggggtgcagataaaggagagaaaaagaagaagaacaatctgaagtctctgttttct
cccaagtctaacctgcagcgtcatggactgtctcagtccatgtctgtcctgggccctctg
cctgagaagaactcctcactgagtggcagccgctcctcaggcctcaatgtggactcctct
gaaggtaaaaataaattcaagtttctgacccataagcgcacaggcagttccgacagtaag
gcttctcagggctccctgtctctggggcgctctaaggtccctgccccgcttgcagaacag
agtaacctgtgcatcaacggcagtcacgtgtacacagaagagccccagtcccggagcgca
cgcaccggctccaccttcagccttgccagctcaggccgcggctccatggaagacctgcgc
agggcccagggccgtaagagctccagcacctccatggactctctcacggccctgaagcag
ccctcaccctgggcagaggaggaagaggaggaggaagaaagatttaagatgggtgaggag
atgaagagaaaggaagagcaggagagaaagaagttagaggaggaagaggggatgaggaag
gaggaacaagagaaaaggaggattggggaggaggaagaaagacttcggtttgaggaggag
aggatacggattgaagaggagaagatgaggtttgaggaggaagagaaaagaaggaaggag
gaacaggaaaacagaaagaggattgaggaggaaaatattagggttgaggatgaaagtaga
atgatggaagaagaagagaggaagaggagactgaaggaggagggagaggagagggtgaag
aagaaagaacaggaaatgagtaggttagaggaggaaatagaggaacaagagaggtgggaa
gaagaggaaagaatgaagagggaggatagcctgagaaaggaggacgagaggaaaatgagg
gaggtggaggaggaggaggagagggttaaggaggaggaagaaaggattaggagagaacaa
gcggaagatatgcaaagaagggaggaacgggagaggaagatgagggaggaggaagaaaga
gtgaagagagagcaggataggctgagaaaggaggaagagagaaggatgagggaggaggaa
gaaagagtgaggaaggccgaggaggatgatgggctgagagaggaagagagaaggatgagg
gaggaggaagaaagagtgaagcaagagcaggataggctgagaaaggaggaagagagaagg
atgagagaggaggaagaaagagtgaggaaggccgaggaggatgataggctgagagaggaa
gagagaaggatgagggaggaggaagaaagagtgaagcaagagcaggataggctgagaaag
gaggaagagagaaggatgagagaggaggaagaaagagtgaggaaggccgaggaggatgat
aggctgagagaggaagagagaaggatgagggaggaggaagaaagagtgaagcgagaacag
gataggctgagaaaggaggaagaggagaggaagattagggaagaggaagaaagagtgagg
aaggccgatgaggaagataggctgagagaggaacatagaaggatgagggaggaagaagaa
agagtgacgagagagcaggataggctgaggaaggaggaagaggagaggaagattagggag
gaggaagaaatgctaaggagggaagaggaggatgatatgcagagaaaggaagaagagcag
aggaagattagggaggaggaaaaaataataaaaatgttagaggaggagaggctgaggaag
gaggaagcagaaagagtgaggcttgaagaagaaagggaaaatgaacaggagagaaggagg
gataaggagcagagagaactgatggaggcgaaagagagatttagggtggaggaagaaaat
atgaaaaaagaggagttgagacaggaagagaggatgagagaggaagagaaaaggagaaat
gcacagatggaggaagagaaggagagtgtaccgttggaggaagttgagaaacagatggaa
cagaatagcgaggcaaaggccaccttgtgcaataatccttttgaggaagtttctcccacc
agttcatttgatgacacctcttcaaataacctgtttgaggagagccctatgacctcctct
actggaccaatcagctgccggataaataaaggatcagcagtcaagccaagaccctcttca
tgggggaacccttcaaagcctgttatatcttccaaccccttcttatcgtcctcgtctcct
gaactggagagttctatggactcccccagaggcgatggggaaaccagagatgctattgac
ccgtctactgagctgatggagaagaaagtccctacccctcttgcccccaacaaacagcgc
tgggctcgtaaggacaactggtctagtaaggccaaatctcattgtgccacacctaaactc
actaaaacaaagccaacaaaaccgccccctcccctcagacgtcactcttccacgtcattg
gtgggaagttgggatgaccaggggagtgttagtggtaaggaccattccagtgtcagacag
gataagggtcctgctccactgcctccagacaaccagcgatgggctcgtaaggacaactgg
cctagtaagtccaacccagattctgccaattctaccctcacccaaataaagccaacaaaa
ccgcaccctcctccaagacgcaactctgccacgtccatggtgggaagtgaacatgaccag
cacttaaatgagagtgttagtcaggatgattccagtgtcaggagggacaagcgtcctgct
ccactgcctcctgacagaccaaaccaggctccaagcgagacacagagggaccagagtatg
accagtgtgaatcagggacataaggacagagtgggtgcctccatgtccaaggtctctcaa
cgtgtggtacagatgatcacaccactgacatcttcctccacagctacaacagaacacatc
agtggaggccagagctcttcccaccatgggaaccaagcaggggaatccatgccatctgcc
attggggggttgattgttgcgaaacacaataaaggtccagcaccctcgaggccccagcac
cctccagggaagacgatgccaaaagctgatgtgttagatgagcaatcaaatactgatgaa
catgaatcttcggttgagtttgagtttgatccaaataatccctttgcagaagactgcaga
atggagaagtcctctggacgtggtgaagaacagagtctaactggtgagcgtcaggagagc
ctggactctcacaatcaacagagttgtacctccacagatgcagatctaggtctgtttcag
aagagtgtggttggggacacaactgagcttccaacaccagatgttctgccagctgaggat
ggctcctgtcccaacaaaagcacatcagcgaaacgggtccgtgctcccttgcctccagtg
aagaaaacatccacctttagagaggaaggaactggtaaacagagttctggaaaactacaa
agcccaggggctcccacttcgagtaagctttcctcaggtatctcagtaaaaacgcagagt
ggcggggtgggtgtggcactaccatgtgttaccgttgcccagcccccatgtgtaccctca
ccggccccctcctccctaccccaccccgagcccctgaagggatcagggggcaggagagac
tgccctccccagacaacaagctctgtccctggccagaagaccctgcttcatgctggagct
ctgccctccattgcagagcagtgcagtggagaggaggcgggagggagtggggacaggcct
gcctcaagcacacgcaggccacacccagtaaagcccttgcgctccctggaaaaccagcca
gcctccgacatccaagagggacaggctggcaaatctacacggatcctcggtggccttcaa
gagaagatgaagggcaaagacacaggggtcaaaggtccctactcccagctgacccaggaa
gagctgatctccctggtggtgaagcagcaggagcagctctccaaaagggatgacaagatc
aaggagctggagcagtatattgacaacctgctggtgcgcatcatcgaggaacaacccagt
atcctgatgtccatgaactcactcaaatga
DBGET
integrated database retrieval system
