Coregonus clupeaformis (lake whitefish): 121582417
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Entry
121582417 CDS
T08357
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121582417 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582417 (depdc5)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
121582417 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
121582417
NCBI-ProteinID:
XP_041754108
LinkDB
All DBs
Position
15:complement(42400656..42434079)
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AA seq
1624 aa
AA seq
DB search
MFCRKLNHRCAVKTTNLFIMKNKTYKLVVHKKGFGGSDDELVVNPKVFPQVSLGDIIEIA
HPTDEYSPLLLQVKSLKEDLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVEL
TFKDQYIGRGDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRV
VFRSTSAMVYIFIQMSCEMWDFDIYGDLYFEKAVSGFLSDLFAKWKERYCSHEVTVVLFS
RTFYNAKTLEEFPEILRGSIRQDHEGRFYEDFYRVVAQTERRDEWVSLLVTIKKLFIQYP
VLVRLKEAVGFPSGHNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGV
FEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLGDDYNLPHW
INHSFYTSKSQNSCSCFTPRIKLAGRKLHAEKFKNNKEHTLGAPKDENSLPIQVDYDAHD
AQVFRLPGPSRAQRSTNFRVVREREVSGRRSWGSADVSGGIGGGVSPPVRSCGPDEQRSL
ASDDSLGKVSNILLIPRLPPAQYGEVSSSLGYTSTRELLEKMMESQRDSSAPGRFTVGSA
ESTLHVRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNM
AELQGSEQRDPAHTSAELLELAYHEATGRRTASERRQAGENGLYSSGGMEEYTHGSPASS
NSTGTPVNRGSSFEDFSSGSLDPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYF
PEWQTLQNDYTEGCYDLLPHTDLERRDDEAPVMSAPQVFEEFICQRLMQGYQIIVQPNKR
KPKPAVAPPLSSSPLYTRGLVSRRRPEEEESLYWLSMGRTFHKVCLKDKIITVTRYLPKY
PYESAQIQYSYSLCPPHSEAHFLSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSL
KFWRTRFLLLPAGGARRVADGEGHWDVYGEGAGTVAGREGMTGTGDWALLDGFIRFLEGL
NRIRRRHRSDRIIRKGPAMKGLQVTGPLSAYPPEPVAPPLGKKGTSALSALLELEQNQKT
LEEQQQQGKPSAATSESSTVSTTTTYVDSPRKDAAFILDFIRSPRSSYIYHTQISTDPAE
GGATDKGGQVGAGAVTGGAAAQATGDTGPSLTTETSGQSGTGALCLSSSSTLMEILEAIK
HPTTGVQLLPEQKGLPPNCFISAEIVHWLVNNVEGVATQGMAVDIMQKMLDEGLVAHASG
DAMRTFVYGFYFYRIVAEKDAERGPTSQLPPPVAQGWSTAALEDFALFQRKWFEVAFVLE
ERRPCDLPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVN
NRSDRTEWCSCYYHGNFSLNAAFEVKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLE
VPFALPSYLYGDPLRAQLFIPLHIHRLLRDGSDNLFEGFEPETYWDRMQLFQEAILYRFG
FVQDKFSASAFNFPSENKPQYIHVTGTVFLQLPYSKRKYSSGQQRRRRNSTASASQGLFG
SEELVGYYWAYNTMLTKAWRTGVLGDEKLADRLLRDFTDFCANKDKRLVNFWDSCQEKMN
ASAP
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcaggaagttgaaccatcgctgtgcagtaaaaacaacaaacttgttcatcatg
aagaataaaacatacaaacttgttgtgcacaagaaaggctttggaggcagtgacgatgag
ctggtggtgaaccccaaggtgttccctcaagtttcccttggggacataattgagattgca
caccccacagatgaatacagccctctcttgctgcaggtgaagagtctcaaagaagacctc
cagaaagagacaatcagtgtggaccagacggtggcgcaagccttcaaactccgggcatac
caggatgtaatcgttaacattgtggatccgaaggatgtaactctggacctcgtagagctc
accttcaaagaccaatacattggaaggggagacatgtggcgactgaagaagagtctggtg
agcacctgtgcttatgtgacccagaaagtggaatttgcagggatcagagcccaggccagt
gagttatgggtgaaaggagagaaggtcacctgtggatacatcagtgaagacaccagggtg
gtgttcaggtcgacctctgccatggtgtacatcttcattcagatgagctgcgaaatgtgg
gactttgatatctacggggatctctactttgagaaggcagtcagtggttttttgtctgat
ctttttgccaaatggaaggagaggtattgcagccatgaagtgacagtggtgcttttctcg
cgcactttctacaatgctaaaaccttggaggagtttcctgagatcttgagaggttccatc
agacaggaccacgagggccgtttctatgaagatttctacagggtagtggctcagactgag
cgacgtgatgagtgggtctctctactggtcaccatcaagaagctcttcatccagtatcct
gtcttggtgcggctaaaagaagcagttggttttccctccggccataactctactgctgct
caggggaattaccttgaggccattaacctgtcttttaacgtctttgacaagcactacata
aaccgcaactttgaccgcaccggtcagatgtctgtggtcatcaccccgggggtgggagtg
tttgaagtggaccgactgctcatgatcctaaccaagcagcgcatgattgacaacggtatc
ggtgtagacttggtgtgtatgggagagcagccactccatgcagtgcctctatttaagctg
cacaacaggacagtgcctggagactcacgactgggggatgactacaacctgccacactgg
atcaaccacagcttttacacatccaaaagccagaactcctgcagctgctttactcctcgc
atcaagctggcaggacgcaagctccatgcagaaaaattcaagaacaacaaagagcacact
cttggggctccgaaggacgagaacagccttcccatccaggtggactacgatgcccatgat
gcacaggtgttcagactccccgggccgtcccgagcccagaggagcaccaacttcagggtg
gtccgagagagggaagtgagtggaaggagaagctgggggtctgcggacgtgagtgggggt
atagggggcggtgtgtccccccctgtccgctcttgtgggcctgatgagcagcggagcctg
gcctctgatgacagtctgggcaaggtgtccaacatcctgctgatcccccgtctgccccca
gcccagtacggagaggtcagcagctccctgggctacaccagcaccagagagttgttggag
aagatgatggagtctcagcgggactccagtgctccggggaggttcacggtggggagtgct
gagtccaccctccatgtgcgcccagggggctacacccctcagagggctctcattaacccc
ttcgccccctcacgcatgcccatgaagctcacctccaaccgcaggcgctggatgcacacc
ttccccgtgggtccgtcgggagaggccatccagatccaccaccagaccagacagaacatg
gctgaactgcagggcagcgagcagagagaccccgcccacacctccgccgaactcctggaa
ctggcctatcacgaggccactggcagacggacagcatcagagagacgacaggctggagag
aatgggctgtactccagcggagggatggaggagtatactcatggcagcccagccagcagc
aacagcactggaacaccggtaaaccgtggctcctcgtttgaggacttttcatctggcagt
ctggatccaaccctgctgctgtctgcccccccgacagtgccaagcttctgttgcacggtg
ggggtagactggaagtctctgaccacacccgcctgtctgcccctcaccaccgactacttc
cccgaatggcagaccctgcagaacgactacactgagggctgctacgacctgctaccacac
actgacttggagaggcgggatgatgaggccccggtgatgagtgcccctcaggtgtttgag
gagtttatctgtcagcggctgatgcagggctaccagatcatcgtccaaccaaacaaaagg
aaacccaagcccgctgtggccccacccctcagcagtagtccactctacaccagagggctg
gtctctcggcgcaggccagaagaggaggagagtctgtactggctcagtatgggccgtacc
ttccataaagtctgcctgaaggataaaatcatcactgttacccgctacctccccaagtac
ccgtatgagtcagcccagatccagtacagctacagtctgtgcccccctcactctgaggcc
cacttcctgtcctgctgggtggagtttggtcatgagagactggaggagtacaagtggaac
tacctggaccagtacatctgctctgctggctctgaggacttcagtttgatagactctctg
aagttctggcggacccgcttcctgctgctgccagctgggggggctagacgtgtggcggac
ggcgaggggcactgggacgtgtacggggagggagcggggacggtggcgggcagagagggc
atgacgggcaccggggactgggccctgctggacggcttcatccgcttcctggagggactc
aaccgcatccgcagacgccaccgctccgacaggatcatcaggaaaggaccggcgatgaag
ggtctgcaggtgactggtcctctctctgcctaccctccagagcctgtagcgccccctcta
ggcaagaaaggcacctctgctttatcagctctcctggagttggagcagaatcagaagact
ctagaggagcagcaacaacaggggaaaccctcagctgccaccagtgagtcttccactgtc
tccacgaccactacatatgtggacagccctcgcaaggatgctgccttcattttggatttt
atacgtagccctcgttcctcctacatctatcacacacagatttctacagatcctgctgaa
ggaggggccacagacaaaggtggtcaggtaggggctggggcggtgaccggtggggctgca
gcgcaggcaacaggggacacaggacccagcttaaccacagaaaccagtgggcaatctggt
actggagccttatgtttgtcctcatcctccaccctgatggagatactagaggccatcaaa
caccccacaacaggtgtgcagcttctacctgagcagaagggcctgccccctaactgcttc
atcagtgctgagatcgtccattggctggtcaacaatgtagagggcgtggccacacaaggc
atggctgttgacatcatgcagaagatgctggatgagggcctggttgcccatgcatcaggg
gatgccatgaggacctttgtctatggcttctacttctataggatagtggcagagaaagac
gccgagcgaggccctacatcccagctacctcctcctgtggcacagggctggtcaacggca
gccttggaggactttgccctgtttcagaggaagtggttcgaggttgcttttgtcctggag
gagcgtcgaccttgtgacctcccggccttcctgctgccctggctgcccagccggcctgcg
tcctatgcaagtaggcacagctccttcagccgcagctttggaggacgcagccaggccgca
gcactgctagctgccactgtaccagagcagaagacggtcaccttggacgtggacgttaac
aatcgcagcgaccgcaccgagtggtgcagctgctattaccatggcaacttctcccttaac
gctgccttcgaggtcaagctgcactggatggccgtcactgcagctgttctctttgagatg
gtccaaggctggcacaggaaggctgcctcctgtgggttcctgttggtgcccgtcctggag
gtgccctttgccctgccctcctacctgtatggtgacccactgcgggcccagctcttcatc
cctctccacatccaccgtctgctgagggacggcagtgacaacctgtttgaggggtttgaa
ccagagacgtattgggatagaatgcagctctttcaggaggccatactgtaccgattcggt
tttgttcaagacaagttttctgcttctgctttcaacttcccatcagagaacaagccccaa
tacatccacgtaacaggcacagtgttcctccagctgccctactccaagaggaagtactct
agcgggcagcagcggaggaggaggaattcaacagcatcagccagtcagggcctgtttggc
tcggaagagctggtgggttactactgggcctataacactatgctgaccaaggcctggagg
acgggcgtgcttggggacgagaagctggctgaccgcctgctcagagacttcactgacttc
tgcgccaacaaagacaagaggctggtcaacttttgggacagctgccaggagaaaatgaat
gctagtgctccgtga
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integrated database retrieval system
