Coregonus clupeaformis (lake whitefish): 121582436
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Entry
121582436 CDS
T08357
Symbol
ppp2r2ab
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121582436 (ppp2r2ab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121582436 (ppp2r2ab)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121582436 (ppp2r2ab)
09158 Development and regeneration
04382 Cornified envelope formation
121582436 (ppp2r2ab)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121582436 (ppp2r2ab)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121582436 (ppp2r2ab)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121582436 (ppp2r2ab)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121582436 (ppp2r2ab)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121582436 (ppp2r2ab)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121582436 (ppp2r2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
121582436
NCBI-ProteinID:
XP_041754142
LinkDB
All DBs
Position
15:complement(40944021..40960719)
Genome browser
AA seq
448 aa
AA seq
DB search
MAGAGGGSNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEI
ENKSQPQCRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYIDPNTVTALRVPVFRPMDLMVEASPRRVFANAHTYH
INSISINSDHETYLSADDLRINLWHQEITDRSFNIVDIKPVNMEELTEVITAAEFHPHQC
NTFVYSSSKGTIRLCDMRASALCDTHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRY
MMTRDYLSVKIWDLNMENRVVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGQRRDVTLEASREGSKPRQVLKPRKVCAGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggaggtgggagcaatgacgtgcagtggtgcttctcacaggtgaagggg
gccattgatgacgacgttgccgaagccgacatcatatctactgtggagttcaaccactca
ggggagctgctagccacaggagacaagggtggcagggtcgtcatctttcagcaggaaata
gagaataagagtcagccacagtgccgtagtgagtacaatgtttacagcactttccagagc
catgagcccgagtttgactacttgaagagtttagagatcgaggagaagatcaacaaaatc
cgctggctgccccagaagaacgcagctcagttcctgttgtccactaacgacaaaaccata
aagttgtggaagatcagtgaacgagacaagagaccagagggctacaacctgaaagaggag
gatggacgctacatagaccccaacactgtcactgcacttcgggtgcctgtgtttagaccc
atggacctcatggtggaggcgagccctcgaagggtgtttgccaacgcccacacttatcac
atcaactccatctcaataaacagtgaccatgagacatatctatccgcagacgacctgcgc
atcaacctctggcaccaggagatcaccgaccgcagcttcaacattgtggatataaagcca
gtcaacatggaggagctgacagaggtgattacagcagcggagttccatccacaccagtgc
aacaccttcgtctacagcagcagtaagggcaccatccgactctgtgacatgagggcatca
gcgctatgtgacacgcactccaaattgttcgaggagccggaggaccccagtaaccgctcc
tttttctctgagataatctcgtccatctcggacgtcaagttcagccacaacgggcgctac
atgatgacccgggactacctgtctgtcaagatttgggacctgaacatggagaacagggtt
gtggagacgtaccaggttcacgagtacctcaggagtaagctgtgctcgctctatgaaaac
gactgcatcttcgacaagtttgagtgctgctggaacggaaatgacagtgtggtgatgacg
ggctcgtacaacaacttcttccggatgtttgaccggggccagcggcgggacgtgaccctg
gaggcgtcccgggagggcagtaagccacggcaggtcctgaagccccgcaaggtgtgtgcc
ggcgggaagcggaagaaggacgagatcagcgtagacagcctggacttcaacaagaaaatc
ctccacaccgcctggcacccccaggacaacatcattgccgtggcaaccaccaacaacctc
tacatattccaggacaaagtgaactag
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