Coregonus clupeaformis (lake whitefish): 121582440
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Entry
121582440 CDS
T08357
Symbol
si:dkey-220f10.4
Name
(RefSeq) tubby protein
KO
K19600
tubby and related proteins
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121582440 (si:dkey-220f10.4)
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121582440 (si:dkey-220f10.4)
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121582440 (si:dkey-220f10.4)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Tubby family proteins
121582440 (si:dkey-220f10.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
121582440
NCBI-ProteinID:
XP_041754152
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All DBs
Position
1:complement(35782554..35789959)
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AA seq
468 aa
AA seq
DB search
MEDPELRQLKLDNQRSLLMKKQQRRRADTQMVTANRDARPKKSKQKTGADDTDLLITQSQ
SNNSLNAEEAHDNPLEEITLGELSLKTNDATDEMPPEKYIITKTMDVDIDSQPQPKLSTE
NEGPAEVKKKEKKEKCVKKEKGQAKPRCQISDNEREEDEILEREKKEKTPKKRKTVEKTK
TNLAPLNSNYRHQDTSDSDDDIGRVTTPISVEDLEKFALHPAPRDTTIQCRITRDRRGVE
KGMYPTYYLHMEKEDGKRVFLMAGRKRKKCKTSNYLISIDPTELSRDTDSYIGKLRSNVL
GTKFTVFDGGDNPDKKPFVKECESVRQELAAICYEKNVLGFKGPRKMTVVIPGMMENDER
VCIRPKSDIESLLSRYENGNTDNLVCLMNKSPSWNEQTQSYVLNFHGRVTQASVKNFQIV
HPDNEDYIVMQFGRVAEDVFSMDYSFPMCPLQAFAITLSSFDGKLACE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccagaattgcgtcaactaaagctggacaatcagcgttcccttttgatgaag
aagcagcagagacggagggccgatacccaaatggtcacagccaatagggacgctcgaccc
aagaaaagcaagcagaagactggagcagatgacacagacctgttgattacgcaatcccag
agcaacaactccttaaatgctgaagaggcccatgataacccactggaggaaattactctg
ggagagctcagcctaaaaacgaatgatgctacagatgagatgccccccgagaaatacatc
atcaccaagactatggacgtggacattgacagccagccacagccaaaacttagcacagaa
aatgaaggccctgcggaagtgaaaaagaaggagaaaaaagagaaatgtgtgaaaaaggag
aaggggcaagcaaaaccaaggtgccaaataagcgacaatgagagggaggaagatgaaatt
cttgaaagagagaaaaaagagaaaactccaaaaaagagaaaaactgtggagaaaaccaaa
accaatctcgcaccgcttaactccaactacaggcatcaggacacctcagatagtgacgac
gacattggaagagtgacaactcctatctcagttgaagatcttgaaaagtttgccctgcat
ccagcccctagagatacaacaatccaatgcagaatcactcgggacaggaggggcgtggag
aaaggaatgtaccccacctactatctccatatggagaaggaggatgggaagagggtgttt
ttaatggcaggcaggaagaggaagaagtgcaaaacctccaattatctcatttccattgat
ccaacagaactttccagagacacagacagttatataggcaaactacgatcaaatgtgcta
ggcaccaaattcacagtgtttgacggtggggataacccagataagaagcctttcgtcaaa
gagtgtgagtctgttcggcaagagcttgcggcaatctgttatgagaagaatgttctaggt
ttcaaaggccccaggaaaatgacggtggttattcctggcatgatggagaatgatgagaga
gtgtgcattcgcccaaaaagtgatatagagtctctgctctcccgctatgagaatggtaac
actgacaacctagtgtgcctcatgaacaagtcccccagctggaacgaacagacacagtcc
tacgtgctcaatttccacggccgcgtcacacaggcctccgtcaaaaacttccaaatcgtc
caccctgacaacgaggactacattgtgatgcagtttggtcgggtagcagaggacgtattc
tccatggactatagcttccctatgtgtcccctgcaggccttcgccatcaccctctcctcc
ttcgatggcaaactggcttgtgagtga
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