Coregonus clupeaformis (lake whitefish): 121582441
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Entry
121582441 CDS
T08357
Symbol
igsf9a
Name
(RefSeq) protein turtle homolog A
KO
K22655
immunoglobulin superfamily member 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121582441 (igsf9a)
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
IGSF9
121582441 (igsf9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Sp38
Motif
Other DBs
NCBI-GeneID:
121582441
NCBI-ProteinID:
XP_041754150
LinkDB
All DBs
Position
15:complement(40811334..40840042)
Genome browser
AA seq
1749 aa
AA seq
DB search
MGPKRDYLLDVTMVTALCLLWVTHGQKPEVRAKVGGVVEMECRLPPPDTGASAPLHVVEW
VRQGFDIPVLIKFGVYAPRVHPNYEGRVSLVRNTVLRVKGLLLEDQGLYECRILLLDKTT
DETRNGTWTLLSVTAPPIFTKTPPPVMETLVGNPLSLACVAHGNPPPTITWAKDGTLIGG
DKVEVLSGTLSLRAVDRESEGQYECLASNTEGNVTHVTKLKVKGPPVIVIPPKDTALNMT
QNAQLRCQAVADPPNMTYVWQREGENVYHIEALKSRVKIMVDGTLLITRITPDDSGNYTC
MPTNGLLIPPTASANLTVRHPAQALLMPPQTYLPTGLGGLVSCSVRAQPPLLRVDWTKDG
QPLDLAMYPGWTLTSEGSVFMATVNDDATGVYMCTPYNSYGTMGQSGPTTVILQDPPSLS
VCPRKEYRQEVGRTLVIPCQTTGDPAPSITWSKVGPATRSQYSVAANGSLLLLPLSKDHQ
GEWECSVTNRVATVKASTLISVLGTSPHAATMVSVSPGAKLANVSWEPGFDGGYTQKFTV
WLKQMSVGDSGEKQEWLSVPVPSSSGSSLQVTGLVPATEYQFSVLPHNKVGTGPFSEIAT
IRTLNPLPRRAKLEPPTSLSANQSSAGIVLQWSPLSQFPPITGFVLQSRTEQGEWFNLDE
DISANRSVMIVPGLRKDCVYELRLVSRRGELLSEPSPSVNVSTMGMDMYPASSHFLEFVP
EPLLAGVMGGVGFLCLAFILVLGSVCIFSHKRDQRRRKKKDDLPPAIYKSPPSIGSLASS
PDSVLKQKLLPPDCHPHYPGSTSPSSCSSSQSDHSSFGRPSRSEYQDQRQHLLSCPPPPP
HYAPQHHHHLPRTGFSPTSPLEFISRGPDGRFIVQPYDQASVPTSHTMRSLKKDFPQSTG
VQRSVSLRSEKSVRREPPFVLSVDLPPCGGTDANPTTRVRAMAKHLSLHGRFYLDGEQDS
CAGHPDESSLYSDSNSDMYPQPSLEESNPGYPSLKRAVQPATASTLVLQMEHERETGNLS
RCLKLAREREELERELRKYTLDSNATLDGKRGGPGSDEERWRGTEECDPIWKPQDNTSPH
SHPHHHSHPHHHSHPQVNRGCSSMAKGPSSPSYIHWEASPLTSATSMVPAHQTPSDRTAT
LHCDPPLTQCPSLSPVTQHHFRSERAECQSKRVSHQPLDRQEGIETARVKTHTGLCDETH
MSTELKRGDFESHEWNSKSNQCLFNVSVSHTSKPDVSVNKVPGSWRVELARSQPCEESSL
HTVVDLSDCVEISVDEPEDEGSVDPPTNPIRHQRHAHQVNNESPLAVKDHRGPRTTKDHR
GHPLAHRNSPVPREERERWHRRSSRSRSPVTIQPPRPALRKAISLGGFQNGDGRNHQRSR
SLDSRRQSQGNFLMPDAWVDSLSQDNCSSPFSFRPDSVFWEPESTLAPETPIHTEAPLAS
QPPPPPPPPPEDPRPPSRTPQHLCEAYRGDMHIPSIRKPVLERQQQLPPTPPSVPSSPSH
PPHDPRKKASIFPDAYRWPITYQEALRSVQRMEARKNTSLPRDHREHPRPPDCRGRTTAP
SLLRGYSWPAPHHTPQPPQEEEKKQEEVVVEEEKEEKYGGHEVEIGRYHRGVPDSGGSYS
SYASQSSGRGSLEPPNGRLSICLSPTLTSSPESTEEMQGNTVETHLQDMAALKRRKASVD
ENYEWDSVDVSIQPGENLEGRGLFSSVSLLKSTPSMHHSREGLKESVHFQGHHHVTSRYS
EPEPETVMF
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaagagggactatcttttggatgttaccatggtgacggcactgtgccttctg
tgggtcactcatggtcagaagccagaggtgcgtgccaaggtagggggtgtggtggagatg
gagtgtagactgccaccccctgacacgggtgcgtctgcgccactgcacgtggtggaatgg
gtgcgccagggattcgacatcccagtcctgatcaagtttggagtgtatgctcctcgggtg
catcccaactacgagggccgagtgtctctggtgaggaatactgtcttgagggtgaaggga
ctcctcctagaggaccagggcctgtatgaatgtcgcatcctcctgctggacaaaaccaca
gatgagacccgcaatggcacctggaccctactgtctgtcactgctcctcctattttcacc
aagacccctccccctgtcatggagactctagtggggaatcctctctctctggcctgcgtt
gcccacggtaacccaccacccaccataacctgggctaaagatggtactctgattggagga
gacaaggttgaggttctgagtgggacactgtctctcagagcagtggacagggagtcagaa
ggacagtatgaatgtctcgcctccaacacagagggcaatgtgactcatgtgacaaagctt
aaagtcaaaggtcctccagtcattgttatccccccgaaggacaccgccctcaacatgacc
cagaatgcccagctgcggtgccaggcggtggctgatccacccaacatgacctatgtgtgg
cagagagagggagagaatgtctaccacatagaggctctgaagtcccgtgtgaagatcatg
gtggacggcaccctcctcatcacccgcattaccccagacgattctgggaactatacctgc
atgcccaccaacggactgttgattccgcctactgcatctgccaatctcactgtgagacac
cctgcccaggctctcctgatgcccccgcagacatatctccccacaggcctgggaggtctg
gtctcctgctctgtgagagcccagccccccctgcttcgcgtcgactggaccaaggatgga
cagccactggatctggccatgtacccaggatggacgttgacgtctgaaggctcggtgttc
atggctactgtcaatgatgatgcaacaggcgtgtacatgtgtaccccttacaacagctac
gggaccatgggccaatcagggcccactacagtcatcctacaggaccccccgtcactcagc
gtgtgtccccgtaaggagtatagacaggaggtggggagaacgcttgttattccctgccag
accactggagatccagcccctagtataacctggagcaaggttggacctgccacacgctct
cagtactctgtagcagccaacggctccctgctgctgcttccgctcagtaaagaccaccag
ggggagtgggagtgcagcgttacaaaccgcgtggccactgtcaaagccagcactctcatc
tcagtgctgggcaccagtccccatgctgccaccatggtgtctgtgtctccaggggcaaag
ctggcaaatgtgtcctgggaaccaggctttgatgggggatacacccagaaattcacagtc
tggttgaagcagatgtctgtgggtgatagtggggagaaacaggagtggctctctgtgccc
gtgccctcctcctctggctccagtctgcaggtgacggggctggtccctgccacagagtac
cagttcagtgtcctgccacacaacaaagtgggcactgggcctttcagcgaaatcgccaca
atccgaactctgaatccactcccaaggagagcgaaactagagccacccacatcgctgtca
gccaatcagagctcggcaggtatagtcctgcagtggtcccccttgtctcagttcccgccc
attactggattcgtcctccaatcgcgcactgagcaaggggagtggttcaatctggacgag
gacatcagtgccaataggagtgtgatgatcgttccaggtctgcgcaaggactgtgtgtac
gagctgcggctggtgtcccggcgaggggagttgctgagcgagcccagtccatcagtcaac
gtctccaccatggggatggatatgtaccctgccagttcccacttcctggagtttgttccc
gagccgctattggctggagtgatgggcggcgtgggcttcctgtgtttggcattcatcctg
gtcctagggtcagtgtgtatcttcagtcacaagagagaccagcgacgcaggaagaagaaa
gatgatctccctcctgccatctataaaagccccccctcaatcgggtcgcttgctagcagt
ccagacagtgtgctgaagcagaagctcctccctcccgactgccacccccactatcccggc
tccacctccccctcctcctgctcctcctcccagtcggaccactcctccttcggcagacct
agccgcagtgaataccaggaccagcgccagcatctgctctcctgccccccacctcctcct
cactatgccccccaacaccaccaccacctccccaggacaggcttttctcccacttcccct
ctagagttcatctccagaggccctgacggtcgcttcattgtgcagccctacgaccaggcc
tccgtccccacctcccacaccatgagatccctgaagaaagacttcccacaatccactggg
gtccagaggtcagtgtcccttcgctctgagaagagcgtgaggagggagccgccgttcgtc
ctctcagtggacctacccccctgtggtggaactgacgccaaccccacgaccagggtccgg
gccatggccaaacacctctccctccacggacgcttctacctggatggggagcaggacagt
tgtgctggacatccagacgagagtagtctctactcagacagtaactcagacatgtacccc
cagccaagcctggaggagagcaatccaggatacccatccctaaagcgggccgtccagccg
gccactgccagcaccctggtgctgcagatggagcatgagagggagaccggcaacctgagc
aggtgtctgaagctggcccgggagagagaggagctggagagagagctacggaagtacaca
ctagatagtaatgctactttagacgggaagagagggggaccaggcagcgacgaggagagg
tggagagggactgaagagtgcgatcccatatggaaacctcaggacaacacttcaccacac
agtcacccccatcatcacagtcacccccatcatcacagtcacccccaggtcaacaggggg
tgctctagcatggccaaaggcccttcatccccgtcctatattcactgggaggccagccca
ctcacctcagccaccagcatggtcccagcacatcagaccccctctgataggacagcgacc
ctccactgtgaccctccactcacccagtgtccctctctgtcacctgtcacacaacaccac
ttcaggtcagagagagcagagtgtcagtctaagagggtgagccaccagccactagacagg
caggaagggatagagactgcaagggtcaagacacacacagggctttgtgatgaaactcac
atgtcaacggagttgaagagaggtgacttcgagtcacatgaatggaacagcaagagcaat
caatgcctttttaatgtcagcgtttcacacacgtctaagccagatgtctctgtcaacaaa
gtgcctggttcatggagagtggagttagcaaggtcacagccatgtgaagagtcatctctc
cacacagtggtggatctctcagactgtgtagaaattagtgtggatgaaccagaggatgaa
ggctcagtggatcctcctacaaatcccataaggcaccagagacatgcccatcaggtaaac
aatgagtccccattggccgtgaaagaccacagaggaccacgaaccacgaaagaccacaga
ggccatccattagcccacaggaacagcccagtacctagggaggagcgggagaggtggcac
aggaggtcatctcggagcagaagcccagttaccattcagcctcctaggccggcgctcagg
aaggctatcagtctaggaggctttcagaacggggacggccgcaaccaccagcgcagccgg
agtctagactccaggagacaatcccagggtaacttcctgatgcctgacgcctgggttgac
tctctcagccaggataactgctcctctcccttctccttccgcccagactctgtcttctgg
gaacctgaaagcaccttagctcctgagacccccatccacacagaggccccccttgcttcc
cagcctccccctcccccgccccctccccccgaggacccacgacctcccagcaggacccca
cagcatctctgtgaagcatataggggtgatatgcacatcccaagcataagaaaaccggtg
ctggagagacagcagcagctccccccaacccctccttcagtgccttccagccccagtcat
cccccccacgaccccaggaagaaggcttccatcttcccagacgcctacaggtggcccatc
acctaccaggaggccctgaggtcagtgcagcgcatggaggccaggaagaatacatctctc
cccagggaccacagggagcaccccagacccccagactgtagaggcagaaccacagctccc
tccctgctcaggggttacagttggcctgcaccccatcacacccctcagccaccccaggag
gaggagaaaaagcaggaggaggtagtagtggaggaggaaaaggaggagaagtatgggggg
catgaggtggagattgggaggtatcatcggggagtgccagactcaggggggagctacagt
agctatgccagccagagcagtggcagggggagtctggagcctccaaacgggcgcctgtcc
atctgcctgtccccaaccctcaccagctctcctgagtccaccgaggagatgcagggaaac
acagtggagacacacctacaggacatggcggcattgaaaaggagaaaggcttcagtggat
gagaattatgagtgggattcagttgatgtgtccattcagccaggagaaaaccttgaaggc
agaggcctgttctcctcagttagtctactgaagtctactcccagcatgcaccattccagg
gagggcctcaaagagtcggtccacttccagggtcatcaccatgtgaccagccgctactca
gaacccgaaccagagactgtgatgttctga
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integrated database retrieval system