Coregonus clupeaformis (lake whitefish): 121582515
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Entry
121582515 CDS
T08357
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121582515
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121582515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
121582515
NCBI-ProteinID:
XP_041754302
LinkDB
All DBs
Position
15:complement(36903305..36983384)
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AA seq
2168 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYSFRGGGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKVKPDAKELWIFWWGDEPSLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKDFVRIGKWFVKPYELEEKHLATSEHLSCSFTFFLHGESNVCTS
VEIAQHQPAYHITDDHIRLAQTSSAPVQVILSPYGLAGSLTGQAYKMSDQAVRKLMEEWS
YFYPMVLQHHRKGGTGGAGTGGMGAEREGTDPPFDPHRHVAVEVIVGGVRMIYPAAFVLV
AHGDLPVEQPPPAPGAQGLSRDPSHCSIPLTPPTSPEQPCSADSGFVTVSSVLPAQESAM
GATNHSPKHSGKKLTNQVVHQAWKECYLNQLQHKCSVPSSVTLKKEAPNGVTTWDFTDPG
ERAPCSCSRLKQQQKQQQQINTSSANPLSGANTTPSSGPALPPPSLPKHKATDKSEKPDK
QPKRVAAMTPFHHRLSVGQEACLEQDSSGGSQLVLVALDPPLDPMPSCKYPKPLSAGRKA
PQSLLHSPVSPLPPTLSPHPRVGQDPEVLDAPVGMAPCPDGASGLVVMEPSETALYAAPL
GPRERDAGVCWWRGFRTPRADKAEFRPPELPSDRVELKTETQATEGVALKRLFMQTQKRF
KISEERVREHIQTLGLLQQPGVEGLGDPGDDPYDFKEGDIEYSFPTSKRLKGRDPSKRGP
KGEEISNGALPDGKDAMSIFSSAPKADDDSPQDDEAAKAQNPPLTRETDLVVLISDLENI
FDEDEEELGTACPNQHTARVLVSGGEDRREGRVAVPYPSTVADLQRMFPTPPSLEQHPAF
SPIMTYRDTPSQEPPAPSGGSDHPLGPLSSTQLQEYRMEVEEGMASPKHEDIKDFSFVYR
VPSVQPQMGCSMFAPLRTLPSQCLPPLKVPDQCYYRPSWALLPKMEHYSSLPPSHHASFT
RDGYVNVPSVGDQEYAQMSASAPSMGTTGGILPSPSPATPRFSVPTPRTPRTPRGVGTAS
GQGSVKQEGTGTELSSPASTPSTSLPMSSVTEPHASCPALSEAHSLYAALLLSDSVLNVF
KDRNFDSCCICACNMNVKGADVGMYIPDSTLEDQYRCMCGFSAIVNRRLAHGTGLFLEDE
LDIFGRGSEVGRAAERRLALCRRDPPMGDPRAKRPQDSSPAPSSVMVLLQEQCSQPISSL
ASLHLPPACSCHGRQGALLQSWMADKQWADGSDACVECYNALVQGQQYVDNPAGGKVDPA
VVRSSALHSWPHTNVLDISILSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPL
TWQQFHKMAGRGSYGSEESPEPLPIPTLLMGYYDNYDRNFLALSPLALPFWEKLLLEPYG
GQRDVAFLVLCPNSETLLAGAQAFFQELSAVYETCRLGKHRPLAKVSRDGLVRVGAVDTE
TESETEKEKEKERQEEEQVDQWFTGPWAGQQHSDNLSKLKLYARACRKQLGPQLSALSLD
SSLLLPPKPQPPPAPTPSSSQPAPSSSQPPSGPGAPAEGEPSAPPVAPRSESTPTPTVAA
SGQPGPAESTQGGSTEVKNTPNAIPPPPSQPETPERVAERERIGIPTLADSADSHAHPPA
IVIYVVDPFLCSGRASDGGGGEEEEEEGEEVEAGSVWLLGLLRCYAEMLQTLPESMRPAL
VLQVVPCQYLLQPASGESPLYLQHLRSLAFSAYSQCRRLLPTQTHIKSLTGFGPASTLES
VLKSPEHHSPLQGYSPPYILGPTRAKQPEPGEVWAEIPPRYNVLFVGYCLSHDQRWILVS
CTDQQGELLETCIINIDVPNRARWPKVSARKMGLQKLWDWCVGIIQMTSLPWRIVIGRLG
RLGHGELKDWSVLLGEHSLHSISRQLKEACRMCGISSADTPSILSACLVAMEPQGSIVVM
PDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAASSYPTEDNADDMF
DLPFPDELENDIGHDILNLHPSPNTSPVPSPGSPSGMGGSSHFQHNRSQGERFLSRENPP
EELKQQPLALGYYVSTAQADSLPHWFWASCPQAQNQCPLFLKASLHHHISIATAQSDEPN
QTSSDKTTKRIPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHLAVLTQM
YNAVLNML
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcagcgaattgggtggctaacggggcaagccttgaagactgccactccaac
ctcttctctctggcagagctgacgggcatcaaatggcggtgctacagcttccgtggcggg
ggcgagtacgggccggtgatctcggcgccagcccaggacgacccggtgctgcgcagcttc
atgcgctgcgtgcaggccaacctcctgtgtgtgtggcgccgcaaagtcaagcctgacgcc
aaggagctgtggatcttttggtggggcgacgagcccagcctctctgacgtcatccatcac
gagctggaagtggctgaggagggactatgggagtgtgggctgtcatacgaatgccggacc
ctcctgttcaaggccattcacaacctgctggagaggtgtctgatggacaaggactttgtg
cggatcgggaagtggttcgtcaagccatacgagctggaggagaagcatctggccaccagt
gagcacctatcatgctccttcaccttcttcctgcatggggagagtaatgtgtgcaccagc
gtagagatcgcccaacaccagcctgcctaccacatcactgacgaccacatccgcctggcc
cagacctcctcagcccctgtacaagtgatcctgagtccgtatggtctagcgggctctctg
acgggccaggcctataagatgagtgaccaagccgtgaggaagctgatggaggagtggagc
tacttctaccccatggtgctgcagcaccacagaaagggaggcacagggggtgccggcacg
gggggcatgggtgcagagagggagggcactgacccaccatttgacccccacagacatgtg
gccgtcgaggtcatcgtaggtggtgtgaggatgatctacccagcagcctttgtgctggtt
gcacatggcgacctgcctgtggagcagcccccacccgcccccggagcccaggggctcagc
agagacccctcccactgtagcatccccctcaccccccccacctcacctgaacagccctgc
tcagcagacagtggctttgtgacagtgtccagcgtcctccctgcccaggagagtgcaatg
ggggccaccaaccacagcccaaagcattctgggaagaaactgaccaatcaggtggtgcat
caggcgtggaaggagtgttatctcaaccaactgcaacacaaatgcagtgtgcccagtagc
gtgacgctaaagaaggaggcgccaaacggggtgaccacgtgggacttcaccgacccaggg
gagagggcaccctgcagctgctccaggttaaagcagcagcagaaacaacagcagcagatc
aacacctcctctgccaaccctctgtctggtgccaacaccaccccctcctccggcccagcc
ctcccccctccctccctgcctaagcacaaggccacggacaagtctgagaaacccgacaaa
cagcccaagagggtcgccgccatgacccccttccaccaccgcctctctgtgggccaggag
gcctgcctggaacaagactccagtggagggtcccagctcgtcctagtcgccctggaccct
cccctggatcccatgcccagctgcaagtaccccaagcccctctcagctggcaggaaagcc
ccccagtccctgctccactctcccgtatccccattaccccccacgctcagcccccatccg
cgggtggggcaggaccccgaggtactggacgcccctgtgggcatggccccctgtccagac
ggggcatcagggctggtggtgatggagcccagtgagacggctctctatgcagcccctctg
gggcccagagagagggatgctggggtgtgctggtggaggggcttcaggactcccagggct
gataaggctgagttcaggcctccagagctgcccagtgacagagtggaattaaaaacagag
acacaggccactgagggagttgcactgaagagactattcatgcagacacagaagcgcttc
aaaatctcagaggagcgtgttagggaacacatccagaccctaggtctactgcagcagcct
ggggtggaagggctgggggaccctggggacgacccctacgacttcaaggagggagacata
gagtacagcttccccacctccaagagactgaagggccgagaccctagcaagagaggcccc
aagggagaggagatcagcaacggtgcactgcctgatgggaaagacgccatgtccatcttt
agctctgcccccaaagctgatgatgactcaccgcaggatgacgaggcggccaaagcccaa
aaccctcctctaaccagggagactgatctggtagtcctcatctcagacctggagaacatc
ttcgatgaggatgaggaggaacttgggactgcttgccccaaccagcacacagccagggtc
ctggtatcaggaggtgaagaccgaagggaggggagggtggctgtgccctatccttcaaca
gtagcagacctccagcggatgttccccacacccccgtccctggagcagcacccagccttc
tcccccatcatgacataccgcgacacccccagccaagagcccccagccccctcggggggc
tccgaccaccccctgggccccctgtcctccacccagctccaggagtaccggatggaggtg
gaggaaggcatggccagtcctaaacatgaggacattaaggacttctcatttgtgtaccgt
gtcccatctgtccagccacagatgggctgctccatgtttgctccgctgcggaccctcccc
agccagtgtctgccccccctcaaggtgcctgaccagtgttactaccggccctcctgggcc
ctgctgcccaagatggagcactactcctccctgccgccctctcatcacgcctccttcacc
agagatggatatgtcaatgtccccagtgttggggaccaggagtatgcccagatgagtgcc
agcgccccgtccatgggcaccaccggcggcatcctcccctcgccatcccctgccaccccc
cgcttctccgtccccacccctcgtaccccccgcacccccaggggcgtaggcacggccagc
gggcagggctcggtgaagcaggagggtaccgggacagagctgagctcccctgcctccacg
ccctccaccagcctgcctatgagctccgtgactgagccccatgcgtcctgccccgccctg
tccgaggcccacagcctgtacgccgccctgctcctctctgactcagtcctcaatgtcttc
aaggaccgcaacttcgacagctgctgcatctgcgcctgcaacatgaacgtgaagggtgcc
gacgtgggcatgtacatccccgactccacgctcgaggaccagtaccgctgcatgtgtggc
ttcagcgctatcgtcaaccgccggctggcccacggcacgggcctcttcctggaggacgag
ctggacatcttcgggaggggctcggaggtgggccgggcagctgagaggagactggcactg
tgccgcagagacccacccatgggagatccccgggccaagcgcccccaggactcctcccct
gccccttcctctgtcatggtgctcctccaggagcagtgctcccagcccatctcctctctg
gcctccctacacctccctcctgcctgctcctgccacggccgccagggggccctgctccag
agctggatggctgacaagcagtgggcggatggcagtgatgcgtgtgtggagtgttacaac
gcgctggtacaggggcagcagtatgtggataaccccgccggagggaaagtagatccggct
gttgtgaggagcagcgctctacactcctggcctcacaccaacgtgctggacataagtatt
ctgtcatcccaggacgtggtgcgtatgctgctgtccctgcagcccttccttcaggacgcc
atccagaagaaacgtacgggccggacctgggagaacatccagcatgtccagggtccgctc
acatggcaacagttccacaagatggccggccggggctcctacgggtcagaggagtcgccg
gagccccttcccatccctaccctgttgatgggctactacgacaactacgaccgtaacttc
ctggcgctgtcgcccctggcgctgcccttctgggagaagctgctgttggaaccatacggg
ggacagagggacgtggccttcctggtgctctgccccaactctgaaaccctgctggccggg
gcacaggccttcttccaggaactcagcgctgtctacgagacgtgtcggttggggaaacac
agacccctggccaaggtgtccagagatgggctggtgcgtgtgggggcagtggacacagag
acagaaagtgagacagagaaggagaaagagaaggagaggcaggaggaggagcaggtagat
cagtggttcacagggccttgggctggacagcaacacagcgacaacctcagcaaactcaaa
ctctacgcgcgcgcctgcaggaagcagctaggtccacagttgtctgccctgtctttggac
agcagtctgttgttaccccccaagcctcagcctcctccggcccctacgccctcctcatcc
cagcctgccccctcctctagccagcccccctctggtcctggggcccctgctgagggagag
ccatcggcccccccagtggcccccagatcagaaagcaccccaacccccacagtagcagcc
tcgggccagccagggccagcagagagcacccaaggagggtccactgaggtcaagaatacc
cccaatgccataccaccaccacctagccagccagagacccctgagagagtggcggagcgg
gagcgaatcggcatccccacgctagcggactcggccgatagccacgcccaccccccggcc
atcgtgatctacgtggtggaccccttcctgtgctcgggccgagcgagtgatggaggagga
ggagaggaggaggaggaggagggagaggaggtggaagcaggcagtgtgtggttactaggg
ctgctgcggtgctacgcagagatgctacagacattgccagagagcatgagaccagcactg
gtgttacaggtggtgccatgtcagtacctgctccagccagccagtggtgagagccctctg
tacctgcagcacctgcgctccctggccttctcagcctactcccagtgcagacgcctccta
cccacacagacacacatcaagtctctgactggcttcggccccgcctccaccctagaatct
gtgcttaagagcccagagcaccacagccctctacagggctactctcccccgtacattctg
ggtcctacccgtgccaagcaaccggagccaggggaggtgtgggcagagatccctcccagg
tacaacgtgctgtttgtgggctactgcctgtcccatgaccagcgctggatcctggtctcc
tgcaccgaccaacagggagagctactggagacctgcatcatcaacatcgatgtgccgaac
agagcacggtggcctaaggtctcagccaggaagatgggactgcaaaagttatgggactgg
tgtgtcggcatcatccagatgacctcactgccatggaggatcgtgattggtcggctgggc
agactaggacacggtgaactgaaagactggagcgttctccttggggagcactctctccac
tccatcagtcgccagctaaaggaggcgtgtcgtatgtgtggcatctcctctgccgacacc
ccctccatcctcagcgcctgcctggttgccatggaaccccagggctccatcgtggtgatg
ccagacgcggtgacgatgggctcggtgtttggtcgcagcacggccctcaacctgcagacg
tcccagctgaacacccctcaagacgcttcctgtacccacatcctggtattccccacctcc
gccaccacccagctggctgccagctcctaccccacagaggataacgctgacgacatgttc
gacctgcctttccctgacgagctggagaatgacataggacatgacattctcaacctgcac
ccctcccccaacacctcccccgtaccctcccctggctccccctcgggcatggggggaagc
tcacacttccagcataacaggagtcagggagagaggtttctgtccagggagaaccctcca
gaggagctgaagcagcagcctctagccctgggatactatgtctccactgcccaggccgac
agcctgcctcactggttctgggcctcctgccctcaggctcagaaccagtgtccactcttt
ctcaaggcgtctctacaccaccacatctccatcgccacagcccaatcagatgagcccaat
cagacaagctcagacaagacgaccaagaggatacctcaccctctggactccaagaccacc
tctgatgtactcaggtttgtgttggagcagtacaacgccctctcgtggctgacgtgcaac
cctgccacccaggaccgccgctcctgcctgcccgtccacttggccgtgctcacacagatg
tacaatgccgtcctcaacatgctctag
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