Coregonus clupeaformis (lake whitefish): 121582520
Help
Entry
121582520 CDS
T08357
Name
(RefSeq) paired box protein Pax-8-like isoform X1
KO
K09293
paired box protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121582520
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121582520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
121582520
NCBI-ProteinID:
XP_041754308
LinkDB
All DBs
Position
15:37088916..37101720
Genome browser
AA seq
474 aa
AA seq
DB search
MWKTYTELSRPEAVKFLARSDLIGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPC
DISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAW
EIRDRLLAEGVCDSDTVPSVSSINRIIRTKVQQPFNLPLDGKGLSPGHILIPSSAVTPPE
SPQSDSLGSTYSISGLLGIPQSSQEGKRSHDDSDQESCRHSVDSQGSGGVPRKQLRPEHF
PPQHLDCGFDRHHYPPDSFSSAAASKTEQTVYPLSLINGSLEDGKTSLSTSSAAIGRNLA
AHQGYTVVTDPLQPLPLCLKQEMSPEVTSTSPSPNVVANSAFLELQSLQAPVSISSSCSS
SNHFPHAFNSFSHHAPVYGQFSSQSLIAGRDMVSSTLPGYPPHIPSSGQTGYSSSAITGM
VAGADYSGQTYTHSPYTSYSEAWRFTNSSILGSPYYYGTASRTAPPSTTAYDHL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacatacacagagctgtctagaccagaagctgtcaaatttctagctagatcc
gacttaattggtcatgggggtcttaatcaactaggcggaatgtttgtgaacggccgtccg
cttccggaggtgatccggcagcgcatcgtggacatggcccaccagggcgtgcgtccctgt
gacatctcccgccagctccgagtcagccacggctgtgtcagcaagatcctgggacgctac
tacgagactggcagcatcaagccaggagtgattgggggctccaagcccaaggtggccact
cctaaggtggttgataaaatagcagattacaagcgtcagaaccccaccatgtttgcctgg
gagatcagagacaggctgctggcagagggggtgtgtgacagtgacaccgtgcccagtgtc
agctctatcaacagaataatccgaaccaaggtgcagcagccgttcaatctgcctctggat
ggcaaaggcctaagcccaggacacatactcatccccagttcagccgtcactccccctgag
tcaccccagtccgactccctgggctccacctactccatcagtggcctgctggggatccca
cagtccagccaggagggcaagaggagccatgacgacagtgaccaggagagctgtagacac
agtgtggactctcagggcagtgggggcgttcctagaaagcagctgagaccagagcacttc
cccccgcagcacctggactgtggcttcgaccgccatcactaccccccagactccttcagc
tctgctgcagccagcaagaccgagcagactgtataccctctctcgctcatcaatggcagt
ctagaagacgggaagaccagcctctcaacatcgagtgctgctattggtcggaatctggca
gcgcaccagggctacactgtggtgacagaccccctgcagcccctcccactttgtctgaaa
caggaaatgtccccagaggtgaccagcacaagcccctctccaaatgtggtggccaactca
gcttttctggagctgcagtcactgcaagcccctgtgtctatcagtagcagctgcagcagc
tccaaccatttccctcatgccttcaactcattctcccatcatgcaccagtgtacggccag
ttcagcagccagtctctcatagcaggaagggacatggtgagctccactctccccggctac
ccacctcacatcccctccagtggccagacaggctactcatcctccgccatcactggcatg
gtagcaggtgcagactactctggccagacctacactcactccccctacacctcctacagt
gaagcttggagattcaccaactccagcattctgggttcaccctattactatggcacggcc
tcccgcaccgctccaccatccactactgcctacgaccatctctag
DBGET
integrated database retrieval system
