Coregonus clupeaformis (lake whitefish): 121582603
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Entry
121582603 CDS
T08357
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121582603
04020 Calcium signaling pathway
121582603
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121582603
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121582603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
121582603
NCBI-ProteinID:
XP_045069181
LinkDB
All DBs
Position
Unknown
AA seq
2252 aa
AA seq
DB search
MSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSD
FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGVEFY
MGKFHTTCFNVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFAVLT
VFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQDFLKLRRQQQIEKELTGYLEWICKAEEVLLEEEDENAEEKSPLDVLKRGKVKKSKN
DLIGAEEGEDHFTDMSSVAPPGSPFGRASVKSSKLESSSYFRRKERRMRFFIRRMVKAQS
FYWIVLCLVGLNTLCVAIVHYDQPEWLTTTLYQAEFVFLGLFLSEMSLKMYGLGARNYFH
SSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYWNSLRNLVVSLL
NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQVLTGE
DWNAVMYHGIESQGGVRQGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
KQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRSSSVSSVHSPKEQQRA
NKMMSVWEQRTNQLRRNNLRASSEALFNELDPEERLRVSSALHLRPDMKTHNDRPLVMEP
GSGDKPRPPEEVRDGADPQQEGGDPHSPQPRKHHHHRERNGENGESRHHIHHSRSRDHDH
PDGPLSKEGKGERSRSREGGQGHRHHHQAGSPEDGVDGGGKEREDRPHHSYRQGNGALDN
GDRGESRGRGHREENGERRKHRSRMVRAQSTLDGDKCRENGERNGDRDQGHRDRQTDSQG
ESLPTSPVQPLAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVTITAPSRETAIIPM
NNIDCESLPLNEEKKDLEEELKNGPKHILPYSSMFVFGQTNLVRRLCHYVVNLRYFEMCI
LSVITMSSIALAAEDPVQANAPRNNVLKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFR
DLWNILDFIVVSGALVAFACSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVF
DCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGKFLDYDRD
EVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDEGPSPGFRMET
SIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRY
MPADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGAPELYEAMLKYLNIVFTA
LFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKLINLSFLRLFRAA
RLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEESAIN
HHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSAGKECGSDFAYFYFVSF
IFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRMTYLDMYE
MLRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGVL
AQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKIDEFNELLCPFAVVNRELTVGKVYAAL
MIFDYYKQNRAKRLEQQLGLDFTGTIKSKKGPTFFRPMTMTHMQEEVTPITSANPLPSSQ
PEPASQPEPLPSTTSLTNGDAVPSPRSAIRESGEQLSQEGQWSSSRNRTLQRGQSEDVPY
SNKPQESVEMRQVENGADIGGYSGLDGHGRAASMPRLDSQYYRNHPRLLPGTYLAPIADI
SPIRRSASMLASQRPQEVNLRNYTLERPRQAQAQASSAPGQAQDRTHHHHHHHRCHRRRD
KDRDKKQKSLDRATSVQPSSTACSPVDPPVEGLSRERARERDRGRPQERRHHSAAGEKKR
YYSCERYGGREHCHTKSAGPSRSTSPGESHDLGLFKQSIGMGKGSQAVLTSGSITPCRGR
RQLPQTPLTPRPAVAYKTGNSLPVQFGATGHQSLLSRGLSDHSALLESPPLPVTLIGSDP
NLSPCPRNAPPHSLPEEPDDFQDAVSTHGGSRSPRTAASASHGAAGPSSAPAPQGRAGVP
NGYHFTLGVNASSSSSPRGTGSFREKEEDDWC
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtctggatgacacagagccctactttattggaatattctgtttcgaggct
ggcattaagattatcgccttgggctttgcatttcacaaaggctcgtacctccgcaacggc
tggaacgtaatggactttgtggtcgtcctcactgggatcctggccacggtgggctcagac
tttgacctgaggactctgcgggcggtgagagtactgagaccactcaaactggtgtctggc
atccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctccag
ataggcctgctgctattctttgccatactcatgtttgccatcatcggagtggagttctac
atgggcaagttccacaccacctgcttcaatgtcgacactggtgagcgagcggcagcattc
ccctgtggtacggaggccccagccaggatgtgtcctaacggtacagagtgtacagagtac
tggatcggccccaactacggcatcaccaactttgacaacatcctgtttgccgtgctcacc
gtcttccagtgcatcaccatggagggatgggtggacatcctctacaatgccaacgatgcc
tcggggaacacctggaactggctctacttcatccccctcatcatcatcggatccttcttc
atgcttaacttggtcctgggtgtcttatcaggggagtttgccaaagagagagagcgtgtg
gagaagaggcaggactttctgaagctgcgcagacagcagcagatagagaaagagcttacg
ggatacctagagtggatatgcaaggcagaggaggtgctgctggaggaggaggatgagaac
gcggaggagaagtcccctctggacgtgttgaaacgaggcaaggtcaagaagagtaagaat
gacctgatcggtgctgaggagggagaggatcacttcactgacatgtcctctgttgcgccc
ccaggctctccgtttggccgggccagcgtgaagagcagtaagctggagagctcgtcctac
ttccgccgcaaggagaggagaatgcgtttcttcatccgtcgcatggtcaaagcccagagc
ttctactggatagtactgtgtctggtgggcctcaacacgctgtgtgtggccatcgtccac
tacgaccagcctgagtggctcaccaccaccctctaccaggcagagtttgtgttcctgggt
ctgttcctgtctgagatgagcctgaagatgtacggcctgggagccagaaactacttccat
tcctctttcaactgcttcgactttggtgtgataataggaagtatacttgaggtggtgtgg
tctatgatcaaaccaggggcatcctatggcattagtgtactgagggctcttcgtctgcta
aggttattcaaattcaccaagtactggaattccctgaggaacctggtggtgtctctgctc
aactcaatgaagtccattatcagtttgctcttcctcctcttcctcttcatcgttgtcttt
gctctgctgggcatgcagcttttcggaggacagtttaattttgaagaagagacaccgacg
accaactttgatactttcccggctgccattctcactgtcttccaggttttgactggcgag
gattggaatgcagtgatgtatcatggcattgagtcccaggggggcgtacggcagggaatg
ttctcctcagtctacttcatcgtcctcacactctttggaaactacacgctcctgaacgtc
ttcttggctatcgccgtcgacaaccttgccaatgcacaggagctcaccaaggatgaggag
aagcaggaggaagaagccaataagaagctggccctgcagaaggccatggaggtgaaggag
gtcagccccatgtcagcagccaacatctcaatcgctgcttttgtaaagcaaaatcgagat
gcactttctcgcagctcgtccgtctccagcgtacattcacctaaggagcagcagagagcc
aataagatgatgtcggtgtgggagcagcgcaccaaccagctgcgccgaaacaacttgagg
gccagctccgaggctctgttcaacgagctggaccccgaggagcgcctgcgtgtctcctcc
gccctccacttgcgccccgacatgaagacccacaacgaccgcccactagtgatggagcca
ggcagcggggacaaaccccggccccccgaggaggtcagagacggagcagatccccagcaa
gagggaggagacccccacagcccacagccccgcaagcaccaccatcaccgggagagaaac
ggggagaatggtgagagcaggcatcacatccaccacagccgcagtagggaccacgaccac
ccagatgggcccctgtccaaagagggcaagggggagaggagccgtagtcgagaggggggg
cagggccacaggcaccatcaccaggctggatccccagaggacggggttgacggaggggga
aaggaaagggaggaccgcccccaccactcctacagacaggggaacggggccctggataac
ggggacagaggggagagcaggggccggggccacagggaggagaacggagagaggaggaag
caccgctcacgcatggtcagggcccagtcaacactggatggagacaaatgcagagagaac
ggagagagaaatggagacagggaccaaggacacagggacaggcagaccgactctcaaggg
gagagcttgcccaccagtcctgttcagcctcttgcaggtctgcaggctggagagaagcaa
gaggatgctgacaaccagaagaacagccacagagccagccaggcaggcctgaacagcaac
actgtccacatccctgtcaccatcaccgccccgtccagagagaccgccatcatacccatg
aataacatagactgtgagagcctccccctgaacgaggagaagaaggacttggaggaggag
ctgaagaacggccccaaacacattctcccctacagctccatgtttgtgtttggacagacc
aacctggtgcgtcggctgtgccactacgtggtgaacctgcgttactttgagatgtgtatc
ctgtcagttatcaccatgagcagcatagccctggctgcagaggaccctgtgcaggccaat
gcaccacgcaacaacgtgctcaagtatctggactacatcttcacaggagtgttcaccttt
gagatggtgattaagatgatagacctgggactgctcctccatcctggttcttacttccgc
gacctgtggaacatcctggactttattgtggtcagcggagctctggtggcgttcgcctgc
tcgagcttcatggggggaactaaaggcaaggacatcaacaccatcaagtctctcagggtg
ctgcgagttctaaggcctctgaagaccatcaaacgactgccaaaactcaaggctgtgttt
gactgcgtggtgaactctctgaagaacgtgctcaacatcctcatcgtctacatgctcttt
atgttcatcttcgctgtgatcgccgtgcagctgttcaagggcaagttcttctactgcacc
gacgagtctaaaggtctggagaaggactgcaggggtaagtttctggactatgaccgtgat
gaagtggcggcccaggatcgtgagtggaggaagtatgagttccattatgacaacgtgctg
tgggccttcctcaccctcttcaccgtttccaccggggagggctggccaatggtcctaaag
cattctgtggatgccacctatgaggacgagggtcccagcccaggcttccgtatggagacc
tctatcttctatgtggtctactttgtggtctttcccttcttcttcgtcaacatcttcgtg
gctttgatcatcatcaccttccaggagcagggagacaaggccatgtcagagtgtagtctg
gagaagaacgagagagcttgtatcgactttgccatcaacgccaagcctctgacgcgctac
atgccggcagacaagcagtcgttccagtataagatgtggcagtttgtggtgtcgccgccc
tttgagtactccatcatgaccatgatcgcactcaacactgtggtgctgatgatgaagttt
cacggtgctccggagctgtacgaggccatgctgaagtacctgaacattgtgttcacagct
ctcttcacactagagtgcatcctcaagatcatcgctttcggaccactgaattacctgaag
gcagcttggaacgtgtttgactttgtgacagtattggggagtatcacggacatcttggtc
acagagattaagacggacaagctgatcaacctgagtttcctgaggctgttcagggcggcc
aggctcatcaagctgctgagacagggctacaccattcgcatcctgctatggacctttgtc
cagtccttcaaggccctaccttacgtctgcctcctcatcgctatgctcttcttcatctat
gccatcatcggcatgcaggtgtttggaaacattgagctgaatgaggaatcagccatcaac
caccacaacaacttccagaccttcttccaggctctgatgcttctgttcaggagtgcaaca
ggcgaggcgtggcatgagatcatgctgtcgtgtctgagtaaccgtccgtgtgataagctg
tcagggtccgcagggaaagaatgcggcagtgactttgcttatttctactttgtctccttc
atcttcctctgctcctttctgatgctcaacctgtttgtggcggtcatcatggacaacttt
gagtacctgaccagagacgcctctatcctggggcctcaccacctggacgaattcatccgt
gtttgggccgagtacgaccctgctgcctgtggccgtatgacctacctcgatatgtacgag
atgctccgtcacatgtcccctccgctaggtttgggaaagaaatgtccgcccagaatcgcc
tacaagcgattggttaagatgaacatgcccatcgccgatgacaacacggtgcatttcaca
tccactctgatggctctcatccgcaccgctctggagatcaaactggcatctggcgtcctg
gcccagcgcctgtgtgacgctgacctgaggaaagagatctccagagtctggcccaacctg
cctcagaagactgttgacctgctggtcacaccatataaaattgatgagttcaatgagctc
ctttgcccctttgcggttgtaaaccgagagctgacagtggggaaggtctacgctgccctc
atgatctttgactactacaagcagaaccgggccaagagactggaacagcaactgggactg
gacttcacagggacaattaagagtaaaaagggtccaaccttcttccgacccatgaccatg
acccatatgcaggaggaggtgacgccaatcaccagtgccaatcccctgccatcctcccag
cctgaaccagcgtctcagccagagcccctgccctccaccacctctctaaccaatggggat
gcagtaccaagccctagaagtgccataagagagtcaggagagcagctgtctcaggagggc
cagtggtccagcagtagaaataggactctacagaggggccagtcagaggacgtgccctac
tccaacaaacctcaggaatcagtggagatgaggcaggtggagaacggtgctgatataggg
ggctactctggtctggatggccatggcagagcagcctccatgccaagactggactcccag
tactatcggaaccaccctcgcctcctacctgggacctacctggcacctattgctgacatc
agtcctatcagacggtcggcatccatgttggcttcccagcgcccccaggaggtgaatcta
aggaactacaccctggagcggcccagacaggcccaagcccaggcctcctcagccccaggt
caggcccaggacaggacccaccaccatcaccaccaccaccgctgtcacagacgcagggac
aaggaccgggacaagaagcagaagtcactcgacagggcaaccagcgttcagccttctagt
acagcatgttcgcctgttgaccctcctgtagagggcttgtccagggagcgggcgagggag
cgtgaccgtggccggcctcaggagaggaggcaccactctgcagccggggagaagaagcgt
tactactcctgtgagcgctacggaggcagggagcactgccacaccaagtcagctggcccc
agccgctccacctcccctggagagtcccacgacctaggcctcttcaagcagagtatcggc
atgggtaaaggcagccaagcggtcctaacttctgggtctatcacaccctgccgtgggcgc
agacagctcccccagacccccctgaccccccgccccgccgtggcctacaagactggaaac
tccttgcctgtgcagtttggtgccacggggcaccagtcccttctcagtcgtggcctctcg
gatcatagcgctctgctggagtcaccccccttgcccgtcaccctcattggctcagaccca
aacctgagcccctgtccacggaacgcccctccacacagcctccctgaggagcctgacgac
ttccaggatgctgtgagcacccatggagggagccgctcccctaggaccgctgcctcagcc
tcccatggggctgctgggccttcttctgcccctgccccacagggccgggctggggtccca
aatgggtaccacttcactcttggggtcaacgccagttcaagctccagccccagagggact
gggagcttccgggagaaggaagaggatgactggtgctag
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integrated database retrieval system
