Coregonus clupeaformis (lake whitefish): 121582614
Help
Entry
121582614 CDS
T08357
Name
(RefSeq) erbin isoform X3
KO
K12796
erbb2-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121582614
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
PDZ
LRR_5
PDZ_2
PDZ_6
DUF240
Motif
Other DBs
NCBI-GeneID:
121582614
NCBI-ProteinID:
XP_041754476
LinkDB
All DBs
Position
15:29360546..29508026
Genome browser
AA seq
1386 aa
AA seq
DB search
MMSSKRNLFVRLVPCRCLRGEEETVTSLDYSHCSLETVPKEIFSFEKTLEELYLDANQIE
ELPKQLFNCQMLHRLSMPDNDLTVLPAAIANLINLRELDVSKNTIQEFPENIKNCKVLAI
VEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKS
MHKLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMLGTLKQLSYLDVSK
NNLEIVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLA
ALDELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTQLPPEMGSWKNATVLFLHSNKLES
LPEEMGDMTKLKVINLSDNKLRNLPYSFTKLTQMTAMWLSDNQSKPLIPLQKEEDPETHK
TVLTNYMFPQQTRTEDCIPNSDSESFNPSLWEEQRKQRAQVAFECDEDKAERETPPREGN
LKRYPTPYPDELKNMVKTAQSVAHRLKEDESGDESGRDTRPNERIHVGVQDVGVKVIEAP
CANGKPVEMEPKAPVCVQDSTAPLETSESYTTQKTSLRTSDNTRTMNHEDTLESFSPQDS
EELSSEEEMKMAEMRPPLIEISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNC
SSPSRMSDSVSLTTDSSQDNSMCTPEREAKMPFLPKSRQEDENMNQQKESTPLLQNGNGS
DTSLQALLKTQQGYESKPEKMVGDYDLSMEERLAFIEKGINNGMGDSFTKWDQVNMNVAK
LPLQPDNMVVQLDDRPNGSSAKETFNHLPPPYNNDNSTAPITDHLENGNQLGDHFNGRSS
EGLAVSPMRVDSATSVVQTSSAGVTASSDMSLSRSTEELSPEKRCPPPVVAKARSITNIE
TGEMKLYSLDTEVGSYKGGVVGRMAGAVPGAQGQSIVRSKSASLLNDQPFQVYPGSSASS
SDLLSSSSKPPVSTSRYPVPSGIAMGPPPQYNVQYTSSALPKEGLWTHRTPVPPDQGYLP
PPQHSLANTNYSNRNQAPPYPLQAQQKGPPTGPKLPGDMWSKERHLPPGGQPWSNTLQRQ
SSSSSTASMGDPRRMQVPEGDYMTYRDIHTLGRGPLAIAQTVQRPLSARTYSIDGPSAPR
PHSARPQPHELPERTMSVSDFNYQHGSPSKRPNARVKSEHSLLDGPGGPGAGGRVPVDWR
DQVMRHIEAKKMEKDDVFGPQGQQGYTMDTLRKVPLMNGQMGGPMRGQVTSCQAPMARHP
SREQLIDYLMLKVSHGQQPQGPPPPRAAHDTLQQEIRVKVEKNPELGFSISGGVGGRGNP
FRPDDNGIFVTRVQPEGPVSKILQPGDKILQANGYSFVNIDHGNAVALLKTFPTTVDMII
VREVTA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgagcaagcggaacctgtttgtgcggctggtgccgtgccgctgcctgcggggg
gaggaggagacggtgacgtcgctggactactcccactgcagcctggagacagtgcctaag
gagatcttcagcttcgagaagaccctggaggagctctatctggacgccaaccagattgag
gagctgcccaaacaactgttcaactgccagatgctccaccggctgagcatgccagacaac
gacctcacagtgctgcccgcggccatcgccaacctcatcaatctcagggagctggacgtc
agcaagaacactatccaggagtttccagaaaatataaagaactgcaaagtcctggctatt
gttgaagcaagtgtgaatcccatctccaagctcccagagggtttcactcagctcctcagc
ctgacacagctctacctaaacgacgccttcctcgagttcctaccagccagctttggcagg
ttgactaaactgcagatcctggagctgagagagaaccagttaaagatgttgcctaaaagc
atgcacaagctcacccagctggagagattggacttggggagtaacgagttcactgaagtg
cctgaggtattggagcagctcactggaatcaaagagctgtggatggatggaaacagactg
acattcctaccagggatgctgggcactctgaagcagctgtcctacctggatgtgtccaag
aacaacctggagatagtggacgagcagatttgtggctgtgagagcctgcaggacctactg
ctctctaataatgcactcacacagctgcccggatctataggctccctgaagaaactaacc
gccctgaaagtggatgagaaccagctcatgtatctgccagactccgtcggagggctggca
gccctggatgagctggactgtagttttaacgagatcgaggctctgccctcctccatcgga
cagtgtgtcagcatacgcaccttcgccgctgaccacaacttcctcacacagctgccccca
gagatgggcagctggaagaatgccaccgtgctgttcctgcactccaacaagctggagtct
ctacctgaggagatgggagacatgaccaagctcaaggtcatcaatctcagcgacaacaag
ttgaggaaccttccctacagcttcaccaagcttacccagatgactgctatgtggctgtct
gataaccagtcgaagcccctcatccctctgcagaaggaggaggatccagagacccacaag
acggttctcaccaactacatgttcccccagcagaccaggacagaggactgcatccctaac
tctgacagtgagagcttcaacccctctttgtgggaggagcagaggaagcagcgggcgcag
gtggccttcgagtgtgacgaggacaaggctgagagggagacgcctccgcgggagggcaac
ctgaagcgctatccgacaccgtacccagacgagctgaagaacatggtgaagacggcccag
tcggtcgcccacaggctgaaggaggacgagtcgggtgacgagtcggggagggataccaga
cctaatgagcggatccatgtgggagtgcaggacgtgggagtcaaggtgattgaggctcct
tgcgccaatggcaagccagtagagatggagcccaaagcgcctgtctgtgtccaggactcc
acagcacccctggagacctctgaatcctacaccacccagaagacctcactccggacctcg
gacaataccaggaccatgaaccacgaggacaccctggagtctttttctccgcaggattct
gaggagctttcatctgaggaggagatgaagatggcggagatgagacctcctctcatcgag
atctccatcaaccagcccaaagtggtggcccttagtaaagacaaaaaagatgacggtaaa
gacgctgactcgttgctggacgaaacagtggccaacagcaatcagaacaacagcaactgt
tcgtccccgtcacgcatgtcggactcggtgtctctgaccacggacagcagtcaggacaac
tccatgtgcacccccgagagagaggccaagatgcccttcctacccaagagcaggcaagag
gatgaaaacatgaaccagcagaaagaaagcacccctctcctccagaacggcaacggctca
gacacgtccctgcaggccctcctgaagacccagcagggctacgagtccaagccagagaag
atggtgggggactacgacctgtccatggaggagaggctggccttcattgagaagggcatc
aacaacggtatgggcgacagcttcaccaagtgggaccaggtcaacatgaatgtggccaag
ctgccactgcagccagacaacatggtggtccaactggacgaccgtccgaatggctcgagc
gccaaggagacctttaaccacttgcctccgccgtataacaacgacaactctacggcgccc
attacagaccacttggagaacggcaaccagctgggcgaccactttaacggccgctccagc
gagggactggccgtgtcgcccatgagggtggactctgccacgtcggtggtgcagacttct
tcggcgggcgtgacggccagcagtgacatgtcgctgtctcgcagcacagaggagttgtcc
ccagagaaacgatgcccccctcctgtagtggccaaggctcggagcatcaccaacatcgag
acgggggagatgaagctgtactccttggacactgaggtgggctcctacaagggtggcgta
gtgggcaggatggccggagccgtaccgggggcccagggtcaaagcattgtccgcagcaag
tcagcctccctgctcaacgaccagcccttccaggtctaccccggctcctcagcctcttcc
tccgacctgctctccagctcctccaagcctcctgtcagcaccagccgctacccagtcccc
tcaggcatagccatgggcccgccgccccaatacaacgtccagtacaccagcagcgccttg
cccaaagaaggcctgtggacccataggacccccgtcccccccgaccagggctacctccct
ccgccccagcactctctggccaacaccaactactccaaccgcaaccaggcccctccatac
cccctccaggcccagcagaaaggcccgcctacagggcccaagctgcccggtgacatgtgg
tctaaggagagacacctgccccccggtggtcagccatggagcaacaccctgcagaggcag
agcagcagctcctccacggcctccatgggagacccccggcgcatgcaggtgcccgagggc
gactacatgacgtacagggacatccacaccctgggccgggggccactggccatagcccag
accgtgcagaggcctctgtcggcccgcacctacagcatcgacgggcccagtgcccccagg
cctcacagtgccaggccacagccccacgagctgcccgagaggaccatgtcggtcagcgac
ttcaactaccagcacggcagccccagcaagaggcccaacgccagggtgaagtctgagcac
tcgctgctggacgggccaggaggaccgggagcaggaggaagggtaccggtggactggaga
gaccaggtgatgcgccacatcgaggccaagaagatggaaaaggatgatgtgtttggtcct
caaggacaacagggctacaccatggacaccctccgaaaagtgcctttgatgaatggtcag
atgggcggtccgatgcgaggccaggtgacgtcgtgccaggcacccatggcccgccacccc
tccagagagcagctcatcgactacctgatgcttaaggtctcgcatggccagcagccccag
ggaccccctccaccacgggctgcccacgacacactgcagcaggagatccgtgtgaaagtg
gagaagaaccctgagttagggttcagtatatcaggaggagtgggaggacggggaaacccc
tttcgtccggacgataatggcatcttcgtgacgagggtccagcctgagggacctgtctca
aagatcctccagcctggagacaagatcctccaggcgaacggatacagctttgtgaacatt
gaccacgggaacgccgtagccctgctgaagacgtttcccaccactgtggatatgatcatc
gtccgagaggtgacagcgtag
DBGET
integrated database retrieval system