Coregonus clupeaformis (lake whitefish): 121582620 Help Entry 121582620         CDS       T08357                                  Symbol tnca Name (RefSeq) tenascin isoform X1   KO K06252   tenascin Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04510   Focal adhesion cclu04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121582620 (tnca)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121582620 (tnca)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121582620 (tnca) Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121582620 (tnca) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN Fibrinogen_C EGF_Teneurin EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N EGF Fn3_Dep-1_1st hEGF fn3_2 NDNF_C Motif Other DBs NCBI-GeneID:  121582620 NCBI-ProteinID:  XP_041754487 LinkDB All DBs Position 15:complement(29956476..30045971) Genome browser AA seq 2389 aa AA seqDB search MGTKSILGCLFLPLLLSLCQAGLVRKILRHKRATLTAPGGDNITLPSADQPVVFNHVYNI NVPASSLCSVDLDAPGSTSLEPQDAVPPSGLHTTEHTLDGQNQIVFTHRINIPQQACACT KGLPDLKDLLSRLEMLEGELSTLRDQCTTGDTGFCSAQPVTGEVETKPYCNGRGNYSADT CGCICNPGWKGPNCTESECPNDCQDQGRCVDGKCICFEGFGGNDCLLEVCKVDCGENGQC IGGVCVCAEGFTGEDCSQTDCLNNCLGRGKCVDGECVCEEPWTGYDCSELICPNDCYDRG RCVNGTCYCEEGFTGKDCGETTCPSDCMSHGFCVDGQCVCSTGYTGEDCSKLTCPGDCND RGTCFNGMCICDAGYQGEDCSQLACLNNCHNRGLCVNGQCHCDVGYQGEDCSELSCPNNC LNRGRCVNGQCVCDEGFGGEDCSIMTCPSDCYGRGDCVDGRCVCYAGFTGEDCGELSCPN NCLNRGRCVDGQCVCDEGFTGEDCSEKRCPNDCLGQGYCVDGKCVCQDSYAGDDCSDLTC PDNCNNRGRCVNGKCICEEGYMGDNCGELSCLNNCQDKGRCVNGQCLCDEGYIGEDCSEV SPPKDLIVTEVTTETVDLTWNNEMLVTEYLITYVPNGPGGLYQEFTVAGDKTAATVSELE PGIEYLINVYAILSNKKSIPISARVATHLPEPEGLKFKSVRETSVEVLWDQLDIPFDAWE LYIRNMKEESGKTLTTLPSSQTLYEQSGLGPGQEYEVSVGIIKNNTRGPQSTKIITTRID GPRQVEVRDVTDSSGLVTWFHPVAQVDGVTVSYGPYSDPTERTSVDLSTTDKQYSIDSLS PDTEYQVSLVSRRGDSTSDPVTEIFTTDLDAPKDLQPLGQTDDSVTLEWRNSQADVDSYR VKYSPISGGSHGEEVFPRGSGENTQATITGLKPGTEYGIGVTAMKNERESLPATTNAATN LDMPKDLEVSESTETSMTLVWKRPRAKNTIYRLVYISRDGRREEVEVPGTATTYNLNNLT PDMMYTITLVAERGSKKSTPATLSTSTASFTFYIANPVPELTTPIGSEDNIISFVSLDPS DPDLQISGVGLELEDELGELTVSVVTSEGFELSWEPKAHVAYDSYILECRDTLGLWDVKE VHLRGDAKGSRIQGLRESTEYRVKLYGVSNSQRSSPLEAVTVTAPKSTSTDVVALSVKSA QTTQSPDTGAVHPTVLPLAPLITEGLTSTSLYTTGDLPSGAEPEPEGSSLETLGDLNVTD VSPTSVRLAWSAPDEAFDSFLVEVNALSGMAQAHVTMVPGSARKTHIEGLSPGTRYEVSL YGKVEGEQSLPLHAFANTEELRPVVANLTVSDVTWDSFNVYWTPEDGEFESFVIEVTNLE GGPESENLTLSADAFNLGISGLSPNTLYRIGLYGLRQGSFQEPVYTEVTTVSEPVVGNLY VSNLTSESFSISWNGTEGEFDGYVLEIIDSDWLKEPKEYKISQNAMSHDITGLKPSTDYI AYLTGIAKGSRTHAVSIIASTAAEPDLSRLVVSNVTSDRLSLSWRTGEKAFDNFIVEVRE SALPSQAMGRTLPGVARDTVMTGLKGSTTYDIKLYASSAGQNTQPLFAVVTTEAVPQLGA IAVSDSSPDNLTLSWGTVAGHFDGFVIRVSDPEQLFDTLEFTPSGEVRNITVTGLVDATD YDIELYGISHGRRTPSLLAHAVTASLPKVENLTISEITPFGFRVSWEAHHPQQQEGAPST GGFGHFHIVVSDSGWLLEPQEFTVPGNQSFLDIWGLITGIGYEVRLTGISSTGLVSRPLT TVAVTEAEPEVEHMFVSDITSDSFRLAWTADEDMFDRFVIKIRDSTKFAHPQEVNVLGDE RTKVLTGLTGGTEYEIELYGVTLEQRSQPITGVARTGLGAPRGIRFSEVTESSAIVHWIM PRARVDSYRIIYVPLQGGSPMTVLADGTETQALLPNMLPGVTYQVTIFAVKGLEDSDPGT ENITTALDRPQGLSAVNVTDTTALLLWKPALATVDGYVITYSADSVSPVMEHVSGNTVEF EMGSLVPATHYTVEVYAMTDAHKSGTTTTEFTTDVDSPRDLAASNIQTDSATLTWKPPRA AITGYILTFTSSDGTVREVVLNPTATSYSMSELVGSSEYSVRLQAIAGAQRNRHVTTVFT TIGVLYRYPKDCSQAMLNGDTISGTYNIYLGGDESQPIQVYCDMTTDGGGWMVFLRRQNG KLEFFRNWRNYTVGFGDMNDEFWFGLANLHKMTAAGQYELRVDLRDNGESAYAQYDNFTI AEQRSRYKMYLGGFSGTAGDSLTYHHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRV NLMGKYGDNSHSKGINWFHWKGHEHSIQFVEMKIRPVNFRNFESRRKRS NT seq 7170 nt NT seq  +upstreamnt  +downstreamnt atgggtactaaaagcattctaggctgcctcttcctgcctctccttctcagtctctgccaa gctgggctggtgagaaaaatacttaggcataaacgggcgactctgacagccccgggcgga gacaacataaccctccccagtgctgaccagccagtggtcttcaaccatgtctacaacatc aacgtccccgctagctccttgtgctcagtggacctggatgcgccaggaagtaccagcctt gagccccaggatgcagttccgccatcaggcctccacaccaccgaacataccctggatggg cagaaccagatcgttttcacccaccgcattaacattcctcagcaggcgtgtgcatgcacc aaagggctcccggatttgaaggacctcctgagcaggttggagatgctggagggagagctg tccacactgagagatcagtgcactactggagacactggcttctgcagcgctcagccagtc acaggtgaggtggagaccaagccttactgcaatggccgtggcaactacagcgctgacacc tgtggttgcatttgcaatcctggctggaagggacccaattgcaccgagtctgaatgcccc aatgactgccaggaccaaggtcgatgcgtagatgggaaatgcatctgcttcgagggcttt ggcgggaacgactgtttgcttgaggtttgcaaagtggactgtggtgagaacggacaatgc attggcggggtctgcgtctgtgccgagggtttcactggagaggactgttctcagactgac tgcctgaacaactgcttaggccgtggaaagtgcgtggatggggagtgtgtgtgtgaagag ccctggacgggctacgactgctccgaactcatctgccccaacgactgctatgaccgtgga cgctgcgtcaacggaacctgctactgcgaagaaggtttcaccgggaaggactgtggggag acaacctgccccagcgactgcatgagtcatggtttctgtgtggatggccagtgtgtctgc agcactggctacaccggagaggactgctccaagctcacctgccctggtgactgcaacgat agaggtacctgcttcaatggcatgtgtatctgcgatgctggctaccaaggagaggactgt agccagctagcttgcctcaacaactgccacaacaggggactgtgcgtcaatgggcagtgc cactgcgacgtaggctaccagggagaggactgctctgagctctcctgccccaacaactgc ctcaaccggggccgctgtgtcaacggacagtgtgtatgcgatgaaggctttggtggagag gactgcagtattatgacctgcccctcggactgctacggccgtggagactgtgtggacggc cggtgtgtctgctatgctggcttcactggtgaggactgcggcgagctgagctgccccaac aactgcctgaaccgcggtcgctgcgttgacggacagtgcgtctgcgatgagggcttcaca ggggaagactgcagtgagaagcgctgtcccaatgactgcctgggccagggatactgtgtg gatggcaaatgtgtctgccaggacagctatgcgggtgacgactgctctgacctcacctgc cctgataactgcaacaacagggggcgctgtgttaatgggaagtgcatttgtgaggaggga tacatgggagacaactgcggagagctgagctgcctcaacaactgccaggacaagggccgc tgtgtgaatggacaatgtctctgtgatgagggatacattggagaagactgctcagaagtt tcccctccaaaggacctgattgtaacagaggtcaccactgagacagtggacctgacctgg aataatgagatgctggtgacagagtatctgatcacctatgtgccaaatggtcctgggggt ctgtatcaggagttcacagtggccggagacaagactgctgccactgtcagcgagctggag cctggcatcgagtacttgatcaacgtctatgccatcctcagcaacaaaaagagcatccca atcagcgccagggtagccacacatctgccagaaccagaaggcttgaagttcaaatcagtg agggagacatcagtagaggtgctgtgggatcagctggacattccctttgatgcctgggag ctctacatccgcaacatgaaagaggagagtgggaaaaccctgaccacccttccatcctcc cagaccttgtatgagcagtcagggctaggtcctggtcaggagtacgaggtctcagtgggc atcatcaagaacaatactaggggaccacagtctactaaaatcatcactaccaggattgat gggcccaggcaggtagaggtgcgtgatgtgacagacagctcaggcttggtcacctggttc catcccgtggctcaggtggacggtgtcaccgtgtcctacggcccctactccgaccccaca gagaggaccagcgtggacctgtccaccacagacaaacagtacagcattgacagcctcagc ccagacactgagtaccaggtgtccctggtctccaggaggggagacagcaccagcgatcca gtcactgagatattcaccacagacctggacgcccccaaggacctgcagcccctgggccag acagacgacagcgtcacactggagtggagaaacagccaggcagacgttgacagctacagg gtgaagtacagccctatctctgggggttcccatggcgaagaggtgttcccccgtggatca ggagaaaacactcaggccactatcactggtttgaagccgggtacagagtacggaattggt gtgaccgctatgaagaacgagagggagagcctgcctgccactacaaacgcagcaaccaac cttgatatgcccaaggacttggaagtgagcgagtccacagagaccagcatgaccctggtg tggaagagaccacgagccaagaacaccatctacaggctggtgtacatctccagggatggc cggagggaggaggtggaggtccctggaacagccacaacctacaacctcaacaacctgacc cccgacatgatgtacaccatcaccctggttgctgagaggggctcaaagaagagcacacct gccaccctgtccacatctacagcctctttcacgttttacatagccaacccggtccctgag cttaccactcccataggctcggaagacaatatcattagctttgtgtcattagacccctct gacccagacctacagatctcaggggtggggcttgagctcgaggatgagctgggagagctg actgtctcagttgtaacgtccgaaggatttgaactttcgtgggaaccaaaggcacatgtt gcctatgatagttatattttagaatgtagagacactctgggattatgggatgtaaaagag gtccatctccgtggagatgccaaaggttctagaattcaaggcctgagggaatccacagaa tatcgagtaaagctttacggagtaagcaatagccaaagatcctccccgcttgaagcagtc accgttacagcacccaagtctacctctactgacgtagtcgcactgagtgtcaaaagcgct cagacaacacagtctcctgacacaggagctgttcatccaacagtccttcccctggctcct ctgatcacagaggggcttacgtctacatctctgtacaccacgggggacctcccctctggg gctgaacctgaaccagagggatccagcctggagacgctaggggacctcaatgtcacagac gtgagccccactagcgtgaggctagcctggtcagccccagatgaagcctttgatagcttt ttggtggaggtgaatgctctgtcagggatggcacaagctcatgtgaccatggtaccagga agtgccaggaagacccatatagaaggcttgtcccctgggacacgttatgaggtttcgttg tatgggaaggtggagggggagcagtctctgcctcttcatgcttttgccaatacagaggag ctgaggcctgtggtggccaacctcacagtctctgacgtgacatgggacagcttcaatgtg tactggactcccgaggacggggagtttgagagctttgtcattgaggtgacaaacttagag ggaggtccagagagtgagaacctcaccctgtcggctgatgccttcaacctgggcatttct ggcctgagtcctaacactttgtataggattggcctgtacgggctccgccagggctccttc caggagccggtgtatactgaagtcactacagtgagcgagccagtggttggcaatctgtat gtatctaatttaacgtccgagagtttctccatctcctggaatggcactgagggagagttt gacggttatgtcctggagattattgattcagattggctgaaggagccaaaggaatataaa atatcccagaatgcaatgtctcatgacatcacagggctaaagcccagcactgactatata gcctacctcactgggattgccaagggatcgcgaacccatgctgtcagtattattgcatca acagctgcagagcctgacttgtccaggctagttgtttctaacgttacctcagacagactt tcactgtcgtggaggacgggggagaaggcttttgataactttatagtagaagtcagagag tctgctttgccctcgcaggccatgggccgcaccctgcctggagtggcacgcgacacagtt atgactggcctcaaggggagtacaacctacgacatcaaactgtacgccagctccgctgga cagaatacgcagcccctattcgctgtagtcaccacagaggctgtcccacagttgggcgca atagctgtgtccgattctagccccgataacttaaccctgtcctggggcacagtggctggt cactttgacggctttgttatccgggtcagtgaccctgaacagttgtttgatacactggag ttcacgccatctggcgaggtccgtaacattaccgtcactggcctagtggacgccactgac tatgacattgagctgtacggtatttctcatggccgccgcaccccttcccttttagcccat gccgtcacagcatcattacccaaagtggaaaacttgaccatttcggagatcaccccattc ggcttccgcgtgtcctgggaggcgcatcatcctcaacaacaggaaggggctccctctact ggtggctttggccactttcacatagtggtgtcagactcaggctggctactggagcctcag gagttcactgtccctggcaaccagagcttcctggacatctggggcctgatcactggcata ggctatgaggtcaggctgactgggatatccagtactgggctggtctcccgcccactgacc acagtggctgtgacagaggctgagccagaagtggagcacatgttcgtctcggacatcact tcagacagttttcgcctggcctggaccgcggatgaagacatgtttgatagatttgtgatc aaaattagggactccacaaagtttgcgcatccacaagaagtcaacgtcctcggtgacgag cgaaccaaggttttaacgggactcaccggcggcaccgagtacgaaatcgagctgtacggt gtcactttggaacagcgctcccaaccaattaccggtgttgctcgaacaggcctgggcgct ccaaggggcatccgcttctctgaagttactgagtcctcggccatagtccactggatcatg cctcgtgccagagtggatagctaccgcatcatctatgtgcctctccaaggaggtagccca atgacagtgctagcagatgggactgagacccaggccttgctgcctaacatgttgccagga gtgacctaccaggtgaccatcttcgctgtgaagggcctggaggatagtgacccggggaca gagaacatcaccacagctctggacaggcctcagggtctttctgctgtcaacgtcacagac acgactgccctgctgctatggaaaccagctctggccaccgtcgatggctacgtcatcacc tacagtgcagattcagtgtcccctgtgatggagcatgtttctggaaacacggtggagttt gagatgggctccctggttcctgccacccactacacagttgaagtgtacgccatgacggat gcacataagagtggcaccaccaccactgaattcaccacggatgtggattctcctcgtgac ctggcggccagtaacatccagacagacagtgccactctcacttggaagcctccgcgtgcc gccatcactggatacatcctcaccttcacctcatccgacggcacggtccgggaagttgtc ctgaatcctacagccacatcgtacagcatgagtgagctggttggctcttcagaatacagt gtcaggctacaggccatcgctggagcccagcggaaccgtcacgtcactacagtcttcacc accattggagttttgtacagataccctaaggactgctcgcaggctatgctgaatggagac acgatctctggcacctacaacatctacctgggaggggacgagagccagcccatccaggtc tactgtgacatgaccaccgacggaggcggatggatggtgttcctgaggcgtcagaatgga aagctggagttcttcaggaactggaggaactacaccgttggctttggggacatgaatgat gaattctggtttggtctggccaacctccacaagatgacggcagcaggccagtacgagctg cgtgtggacctgagggacaacggggagtcggcctacgctcagtatgacaatttcaccatt gcagagcaacgcagccgctacaagatgtacttaggagggttcagcggcacagcaggtgac tctctgacctatcaccatggccggccattctccacgtacgacaatgacaacgacattgca gtaaccaactgtgccctgtcctataagggtgccttctggtacaagaactgccatcgtgtc aacctcatgggaaaatatggtgacaatagtcacagcaagggtatcaactggttccattgg aagggacacgaacattcaatccagttcgtcgagatgaagattagacccgtcaacttcaga aactttgaaagcagacggaaaagatcatag

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