Coregonus clupeaformis (lake whitefish): 121582637
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Entry
121582637 CDS
T08357
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121582637
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121582637
Transporters [BR:
cclu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
121582637
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Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
DUF6077
Pentapeptide
SNaCT12
Motif
Other DBs
NCBI-GeneID:
121582637
NCBI-ProteinID:
XP_041754520
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All DBs
Position
15:30592870..30638541
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AA seq
742 aa
AA seq
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MDESYNNRTSLVKGAKDIAKEAKRHAAKKVSKVVNRAADEYSSQRNYSQFQNEDEDDDDR
CYAYTQPDGNGHFPSSRTANDEDGEDYASDATEGHDDEDEIYEGEYQGVPSYTDAKPRDG
QVSLGQPVSDSLRDRKELELERQADEEELAQQYELIMQECGHGRFQWQLFFVLGMALMSD
GVEVFVVGFVLPSAETDMCVPNSGAGWLGSIVYLGMMVGAFFWGGLSDRVGRKQCLLIAM
SVNGFFSFLSSFVQGYGMFLFCRMFSGFGIGGAVPIVFPYFAEFLAREKRGEHLSWLCMF
WMIGGIYASAMAWLIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPR
FFLEMGKHDEAWMVLKQIHDTNMRARGEPEKVFTVNRIKLPKHLDELVEMQSDSTNPVAK
VLFRIRTELRGIWLTFMRCFNYPVKDNTIKLAFVWFTLSFGYYGLSVWFPDVIHHLQSDE
YASRVKTHNNERTEDFTFNFTLENQIHTNGVFVNDRFISMKLKSVTFIDSTFQNCYFDDV
STVGSLFKNCTFVEAFFYNTDIDDSKLVGSRVINSSFHHNKTGCQMTFDDDYSAYWVYFV
NFLGTLAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNG
LSISAWNSLDVVTAELYPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKAIPILLAS
AVLVGGGLVGLRLPDTRSNVLM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcgtacaacaacaggacatcgctggtgaagggcgccaaggacatcgccaaa
gaggccaaacgccacgccgccaagaaggtcagcaaggtcgtgaaccgcgccgcagacgag
tactcctcccaacgcaactacagccagttccagaacgaggacgaagacgatgacgacaga
tgctacgcctacacgcagcccgacggcaacggccactttcccagtagccgcaccgccaac
gacgaagacggggaagactatgccagtgatgccacggagggtcacgatgatgaagatgag
atctacgagggggagtaccagggtgtaccttcttacactgatgcgaagcccagggatgga
caggtttctctgggtcaacctgtctcagacagcctgagggaccgtaaggagctggagctg
gagaggcaggcggacgaggaggagctggcccagcagtatgagctgatcatgcaggagtgt
ggccacggcaggttccagtggcagttgttcttcgtgctgggcatggcgctgatgtcagat
ggcgtggaggtgttcgtggtggggtttgtcctgcccagcgccgagactgacatgtgtgtc
ccaaattctggagctgggtggctaggtagcatagtgtacctagggatgatggtgggagcg
ttcttctgggggggtctttcagacagggtgggccgtaaacagtgcctgctcatcgctatg
tctgtcaacggcttcttctccttcctctcctccttcgtccaggggtacggcatgttcctc
ttctgccgcatgttttccggtttcgggattggtggggcggttcccatcgtgttcccctac
tttgcggagttcctggcgagggagaagagaggagagcacctgagctggctctgcatgttc
tggatgataggagggatctatgcctctgccatggcctggctcatcataccacactacgga
tggagtttcagtatgggctccgcctaccagttccacagttggagagtatttgtggtggtg
tgtgctctaccctgtgtgtgtgctgtcgtagcactcaccttcatgcccgagagcccacga
ttcttcctagagatgggtaaacatgacgaggcatggatggtgctgaaacagatccacgac
accaacatgagggcccgcggagaaccagagaaagtcttcactgtgaacaggataaagctc
cctaagcatctggatgagttggtagagatgcagtcagactcaaccaacccagttgccaaa
gtcctcttcaggatcaggactgaactcagagggatctggttaacattcatgagatgtttc
aactacccagtgaaagacaacaccattaaactggccttcgtgtggttcacactatctttt
gggtactatggcctatcagtgtggttccctgatgtcatccatcacctgcagtctgatgag
tatgcctctagagtgaagacgcacaacaacgaacgtacagaagacttcacctttaacttc
accctggagaaccagatacacactaacggagtgttcgtcaatgacaggttcatcagtatg
aagttgaagtccgtcaccttcatagactctacgtttcagaactgttactttgacgacgtg
tcaacagtgggctcattattcaagaactgcaccttcgtagaagccttcttttataacaca
gatattgacgattctaagctggtggggtcgagggtgatcaacagttcgttccaccacaac
aagacgggctgtcagatgacctttgatgacgactacagcgcctactgggtctacttcgtc
aacttcctggggacactcgccgtgttgcccggcaacatagtctccgcccttctcatggac
aagatagggcgcctgagcatgctggggggctccatggtgctgtcaggcatcagttgtttc
ttcctgtggtttgggaccagtgagtctatgatgatcttcatgctgtgtctctataacggc
ctcagtatatcagcctggaactctctggacgtagttactgctgagctctaccctactgac
aggaggggtacaggttttgggttctgtaatgccttgtgtaagctggcagcggtgttgggg
aacctgatctttggttctctggttggcatcacaaaggccatccccatactgctggcgtca
gctgtactggtgggaggaggcctggtgggactacgactgcctgacacacgcagcaacgtc
ttgatgtag
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