Coregonus clupeaformis (lake whitefish): 121582653
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Entry
121582653 CDS
T08357
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121582653
03041 Spliceosome [BR:
cclu03041
]
121582653
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121582653
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121582653
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
121582653
NCBI-ProteinID:
XP_041754557
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Position
15:31533947..31543035
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AA seq
390 aa
AA seq
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MMDDETPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
ASSLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIDGHVVKCYWGKETTDMVSPMQQVQMPQVRPQQNKIG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVS
NGGVVEPGQGVNGTVLANQSGMGTAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaaacacccaagaccctgtatgtggggaacctgtcccgggatgtgacc
gaagccctcatcatgcagctgttcggccagatcggcccctgcaagagctgtaaaatgata
gtagatacggcaggtaatgacccatactgctttgtggagttctacgaacacaggcacgct
gcctcgtcactcgcagccatgaacggtcgtaaaataatgggtaaggaggtcaaggtgaac
tgggcaacaacccctagcagccagaagaaagacacaagcaatcacttccacgttttcgtt
ggagacctcagtcctgaaatcaccacggatgacatcaaagctgctttcgccccctttggg
aggatatctgatgctcgggtggtgaaagacatggctactggcaaatctaaaggctatggc
tttgtgtccttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttgggaggacggcagatcaggacgaactgggccaccaggaagccccctgcgcccaaa
gccacctacgagacaaacaccaagcacctgtcatttgaagaggttgtgaaccagtccagc
cccagcaactgtaccgtctactgtggaggagtcacaacaggactcacagagcaactgatg
aggcagaccttcacgcccttcggccagatcatggagatcagagttttcccagacaaaggc
tactcatttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaat
ggaacgtccatagatggtcacgtggtgaagtgttactgggggaaagagaccacagacatg
gtcagccccatgcagcaggtacagatgcctcaggtaagaccgcagcagaacaaaatcggg
tttgcagcgcagccctacggccagtatgcccagtggtacggtaacgcccagcagattggc
cagtacgtcccaaacgggtggcaggtgcccacctacggcgtctacggacaggcctggaac
cagcagggattcaatcatttacaggcgggtgcagggtggacgggcgtgggagcagtcagt
aacggaggcgtggtggagcctggacagggagtcaacgggactgtgctggccaaccagtcc
ggcatgggcaccgctggctaccacacccactga
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