Coregonus clupeaformis (lake whitefish): 121582665
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Entry
121582665 CDS
T08357
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
cclu04142
Lysosome biogenesis
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04148
Efferocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121582665
04145 Phagosome
121582665
04142 Lysosome biogenesis
121582665
04140 Autophagy - animal
121582665
04137 Mitophagy - animal
121582665
04148 Efferocytosis
121582665
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121582665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121582665
04031 GTP-binding proteins [BR:
cclu04031
]
121582665
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
121582665
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121582665
Exosomal proteins of other body fluids (saliva and urine)
121582665
Exosomal proteins of colorectal cancer cells
121582665
Exosomal proteins of bladder cancer cells
121582665
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
121582665
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
ATP_bind_1
cobW
nSTAND3
PduV-EutP
AAA_16
Septin
NTPase_1
AAA_22
AAA_7
DUF5992
AAA_5
AAA_24
ATPase_2
SRPRB
NB-ARC
NACHT
AAA_14
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
121582665
NCBI-ProteinID:
XP_041754580
LinkDB
All DBs
Position
15:32984425..32988872
Genome browser
AA seq
204 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNNIPYFETSAKEAINVEQAFQTIARNALKQESEV
ETYDFPDQIKLRDDQPSSSDGCSC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacgtctctgatgaaccagtatgtaaataagaggttcagtaaccaatacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggatgacaggctggttaccatgcag
atctgggacacggcggggcaggagcggttccaatctctgggtgtggcgttctaccgtggg
gctgactgctgcgtgctggtctatgatgtcacagcgcccaacaccttcaagacgctggac
agctggagggacgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgaccttgagaacagacaggtgacgacaaagcgtgcccag
gcctggtgtgccagtaagaacaacatcccctactttgagaccagtgccaaagaggccatc
aacgtagagcaagcattccagaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacatatgacttcccagaccagatcaaactgagagacgaccagccctcctccagcgat
ggctgctcctgctga
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