Coregonus clupeaformis (lake whitefish): 121582673
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Entry
121582673 CDS
T08357
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121582673
04371 Apelin signaling pathway
121582673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121582673
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
121582673
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
121582673
NCBI-ProteinID:
XP_041754586
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Position
15:complement(16639999..16673732)
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AA seq
474 aa
AA seq
DB search
MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCNCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNDPHESRTNSDIVETLRKKGLNGCDSPDIEADDSAGQSPESEDKYRKI
NEDIDLMISTQRLCQALPPLNYDMVGSIQGQNNSGLLYSHPGAGGSLCNHNLLPFSHTHP
GLQRDSMSPGPQHTHRPPSAGNAGGMMGSELSNTVSNAGNSNYGNHRNSPGLLSPGSMAK
GIQAKTPPPINSMTLSCNRKPDLCTLLPPGNKNNMPSINQRINHSQSAQTFATPVVSIAT
STLPGQGMGGYPSALSASYGTEYSLGDLSGFGNSSGSLHLGSVTGWQQQSLQNIQHSALG
HMGNLCQNSNLNLQNVHQNLYIKSEPASPPRDRGIGFDSGGMGGVSHGYPTYQCPAEAGQ
SPGDSLSSCGSSYDGSEREDHRGNDNFLLCPMSNQEERHSPSLKRMRLSECWAR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagatccagatagcacggattatggatgaacgcaacagacaggtgaca
ttcaccaagaggaagtttggcctgatgaagaaggcgtatgagctgagtgtgctgtgcaac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtacgccagcact
gacatggacaaggtcctgctcaaatacactgagtacaacgaccctcacgagagcaggact
aactctgacatcgtggaaactctgcgtaagaagggtcttaatggttgtgacagtcccgac
atcgaggcagacgactctgctggtcagagccccgagtcagaggacaaataccgcaagatc
aatgaagacattgacctcatgatcagcacacagagactctgtcaggctctccccccgctt
aactacgacatggttggctccatccagggccaaaacaacagtggactactctactctcac
cccggggcggggggatccttgtgtaaccacaatcttctgcccttttcccacacacaccct
ggcctgcagagagacagcatgtcgcctggaccccaacacacacaccgaccccccagtgct
gggaacgcaggagggatgatgggttcagagctgtctaacactgtctccaacgctggtaac
agtaactatggtaaccaccgtaactccccggggctgctgtctccgggaagcatggccaaa
ggcattcaggccaaaactccgcccccgattaactccatgaccctgagttgtaaccgcaag
ccggacctctgcacgctgctgccccctggcaacaagaacaacatgccctccatcaaccag
agaataaaccactcccagtctgcccagacatttgctactcctgtggtctccatagcaaca
tctactctgcccgggcagggcatgggagggtacccctctgccctctccgcctcatatggc
acagagtactctctgggtgacctgtcagggtttggtaacagctcaggatctctccacctg
ggatcagtaacaggctggcagcaacaatcgctacagaatattcagcactcagcactagga
cacatgggaaacctttgtcagaactccaaccttaacctccagaatgtccatcagaacctc
tacatcaagtcagagcccgcctccccgcccagagatcgaggcatcggatttgatagcgga
gggatggggggcgtgtcccatggctacccaacatatcagtgcccggcagaggcagggcag
tctcctggcgacagcctatccagctgtggcagctcatacgacggcagtgaacgcgaggat
caccgcggaaacgacaacttcctgttatgcccgatgtccaatcaggaggagcgccacagc
ccgtccctgaaacgaatgcgcctatcagaatgctgggctagatga
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