KEGG   Coregonus clupeaformis (lake whitefish): 121582686
Entry
121582686         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
  KO
K04551  ubiquitin B
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120  Ubiquitin mediated proteolysis
cclu04137  Mitophagy - animal
cclu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121582686
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121582686
   04137 Mitophagy - animal
    121582686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121582686
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121582686
Ubiquitin system [BR:cclu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121582686
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   121582686
  Exosomal proteins of other body fluids (saliva and urine)
   121582686
  Exosomal proteins of colorectal cancer cells
   121582686
  Exosomal proteins of bladder cancer cells
   121582686
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD OTU1_UBXL Dsc3_N Ubiquitin_5 Clenterotox
Other DBs
NCBI-GeneID: 121582686
NCBI-ProteinID: XP_041754610
LinkDB
Position
15:17098144..17100204
AA seq 306 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPQTSSVXSSPGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSTTTSRRSPPFTLSCV
SVEATS
NT seq 921 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagacccttaccggcaagaccatcaccctagaggttgagcccagt
gacaccatcgagaacgtcaaggccaagatccaggacaaggagggaatccccccagaccag
cagcgtctgatcttcgccggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggcatgcagatcttt
gtgaagaccctgactggtaaaaccatcacccttgaggttgagcccagtgacaccatcgag
aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgccggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtgctccgtctgaggggaggcatgcagatctttgtgaagacgctg
actggtaagaccatcaccctagaggttgagcccagtgacaccatcgagaacgtcaaggcc
aagatccaggacaaggagggcatcccccagaccagcagcgtctgatcttcgcccggcaag
cagctggaagatggccgtaccctctccgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggcatgcagatctttgtgaagacgctgactggtaagacc
atcaccctagaggttgagcccagtgacaccatcgagaacgtcaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgccggcaagcagctggaagat
ggccgtaccctctccactacaacatccagaaggagtccacccttcaccttgtcctgcgtc
tccgtggaggcaactagttaa

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