Coregonus clupeaformis (lake whitefish): 121582704
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Entry
121582704 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121582704
04082 Neuroactive ligand signaling
121582704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121582704
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121582704
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121582704
NCBI-ProteinID:
XP_041754658
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Position
1:complement(44808345..44890366)
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AA seq
459 aa
AA seq
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MMAVLRSGGRVFIMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDVASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNTNDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARVCIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPDANIVMYGHQMGGFDEEMNGMVTTIA
TENNRAKRRKEKAAAASAPMAELELGPSSSTGSEPKPEAPEETPNRCITVLVLLRKILRK
AANCCHVENPHLIDNYSRRTFPLSFVFINLLYWTYYLYL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttctccgctctggagggagagtgttcatcatgctcctcattagcaggatg
ttagagaactctctgctcagcgctgaagtgaaggagggagagattctgcctcccaccatt
cagaagttgatgaaaggatacaacaagtacctcaggcctttctttgacaatgggccagtg
actgtgggcatgagtttggacgttgccagcattgacaccatatcagagatcaacatggac
tacacggccaccatcttcctgcgtcagcgctggacagacgagcgcctggtgtttgagggg
aacaaaagcctgagtctggacggcaggctggtggagctgctctgggtaccagacaccttc
atcgtagactctaagaagtccttcctccatgacatcactgtggagaacaggctgatcagg
atcttccccaatggaacagtgctctacgccctgaggatcaccaccactgtggcctgcaac
atggatctgaccaaataccccatggacaagcaaacctgcactctgcaactggagagctgg
ggctacaacaccaatgatgtgatgttctactggaccagagggaatgagtcggtcagtggt
ttggacacgctgcgtctagctcagtacacagtagaggaccactacacctctgcgtctgag
gccatctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagc
atcctgtacttcatcctggagacgtatgttccctctagcctgctggtggtcctgtcctgg
gtttccttctggatcagccagtcctccgtccccgcaagagtctgcatcggagtgaccacg
gttctgaccatgaccacgttgatgatgggtgccaggacgtccctgcccaatgccaactgt
ttcatcaaggccatcgacgtgtacctgggcatctgcttcagcttcatcttcggagcgctg
atcgagtacgcagtggcccacttctgcaccctcaaccaccccgacgccaacattgtcatg
tacggtcaccagatgggaggctttgacgaggagatgaacggcatggtcactaccatcgcc
actgaaaacaatagggccaagaggcgtaaggagaaagctgctgcagcctcagcgcccatg
gcagagctggaactaggcccctccagctccactggcagcgaacccaagcctgaggcccct
gaggagaccccgaaccgctgcatcactgtcctggtcctcctccgcaagatcctgcgcaaa
gctgcaaactgttgccatgttgagaatccccacttaatagacaactactccaggaggacc
ttccccctctcctttgtattcatcaacctcctctactggacatactacctgtacttgtaa
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