Coregonus clupeaformis (lake whitefish): 121582732
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Entry
121582732 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04144
Endocytosis
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121582732
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121582732
09144 Cellular community - eukaryotes
04530 Tight junction
121582732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582732
04121 Ubiquitin system [BR:
cclu04121
]
121582732
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121582732
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121582732
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121582732
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
121582732
NCBI-ProteinID:
XP_041754725
LinkDB
All DBs
Position
15:complement(54818648..54939428)
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AA seq
1266 aa
AA seq
DB search
MSQRLHLYFGSGRSNTAPEMEELERPSQDLNDVSMTFHMQQQQRHRPQRWSSRDSPTFSW
RPEGDLLALSAFSGPRQRPDREIFFGQRPLSERPLAGPGDSSLKRSSSMFIPQLTPAEPR
PTKSSSMQISLQRSSGGAGTAEEPPPGPPPSYTPEPAPAYSEPERSYHYTLPPPPPYYSR
DAPVPVTASSPPCYSQDTSASSSSAMPQNQNHPQPTEPAQLKRRVFCVVPQDNSSNGQAS
SAMSNGKGGGGPPGISIGRFHLSRNSPDESEVQQFRIGYGSGSQVGGPCHWSVQQQNSDP
GHPSTTQRLVFQPGQQDQAQARQANNVNVMTPSGSKGERVVRYPRIRLERSTSHQRLPLR
NHQMSGNVGEPQGSEGSPSEMDSQSMDIEGGCTFKIRREAPKRQPYFKISLCQGGDVPTV
QNIRLGNGQTRDDFLGQVDVPLNHLPMEDPTMERPYTFKDVLLWPRSHKSRVKGYLRLKM
AYLPKTGGPEEESTEGMTGEEAEGWEVNDLADPSVQRPQAVEPPLPPGWEEKVDNLGRTY
YVNHNNRSTQWKRPSNVDVVSEVENDNQQRANNIQAHRVFHSRRHISENLEDEHIEPRDM
DDLWDPITEESPDDLLPGPLSSIMSMPTPQTPPPPPHQEFSEEINLRLSLTPTPGPGLHA
PPPDINGEVAGPSHASAVQCHLSSRLRSSTMTDGVSDQAQPPPASQSAAYALTTPGLPPG
WEERKNAKGRTYYVNHNNRCTTWTKPILQGVANNIAVRLAVKETLSNPQSPQPSPYSSPK
SGHKPQQSFLPPGWEMRIAPNGRPFFIDHNGRLTTWEDPRLKYPVHMRTKASLDPGDLGP
LPPGWEERVHADGRTFFIDHNTKTTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLK
KPVDIPNRFEMKLHRTNIFEESYRRIMSLKRPDILKARLWIEFESEKGLDYGGVAREWFF
LLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDG
FFIRPFYKMMLGKQITLKDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVY
LKPSGSDMVVTNDNKMEYIDLVIQWRFVNRVQKQMNAFLEGFTELILIDLIKIFDENELE
LLMCGLGDVDVNDWRQHTVYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVP
MNGFAELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPTYESFDDLREKLLMAVENAQ
GFEGVD
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaggctgcatctgtactttggctctggccgcagcaacacagctccagagatg
gaggagctggaaaggccgtcccaggacctcaacgatgtctccatgacattccacatgcag
caacaacagcgtcaccggcctcagcgctggagcagccgggactcacctaccttctcctgg
cgtcctgaaggagacttgcttgccttgagtgccttctctgggccacggcaacggcctgat
agagagatcttctttgggcaacgtcccttgtcggagagacctctggctggtcctggagac
tcctcgctcaaacgaagctcctcgatgtttataccccagctgactccggcagagccacgg
cccaccaagagttcctcaatgcagatctctctccagcgatcctccggtggcgccgggact
gctgaggagccacctccaggtccaccacccagctacacaccagaacccgctcctgcctat
agtgagcccgaaaggagctaccactacactcttccaccaccaccaccctactacagcaga
gacgctccagtcccagtcacggctagctcaccaccttgctacagccaagatacttcagct
agctccagctccgccatgcctcagaatcagaatcaccctcaacccacagaacctgctcaa
ctcaagcgaagggttttttgcgttgtgccccaagacaacagctcaaacggtcaggctagc
tcagctatgtctaatggaaaaggaggaggaggcccacctggaatcagcataggacgcttt
cacttatcaaggaactccccagacgaatctgaagtccagcagttcaggatcggctatggg
tctggcagccaggtaggtgggccctgccactggtctgtccagcagcagaactcggaccca
ggtcatcctagcactactcagaggcttgtgttccagcccgggcagcaggaccaggcccaa
gccaggcaggccaacaacgtgaacgtcatgaccccaagcggctccaagggagagcgtgtg
gtgcgttaccccaggatccggctggagagaagcacttcgcatcagcggctgccccttcgt
aaccaccagatgtccgggaatgttggggagccccagggcagtgaaggaagcccctcggag
atggacagtcaaagtatggacattgaaggtggctgcactttcaaaatcaggagagaagcc
cccaaacgacagccttacttcaagatttctttatgtcagggtggagatgtccccactgta
cagaatataagactgggaaatggtcagacgagagatgatttcctgggacaggtcgatgtg
cctctcaatcatttgccgatggaggaccctacgatggagaggccgtacacatttaaagat
gtccttctatggccacgaagccacaagtccagggtgaaggggtatctgcggctgaagatg
gcctacctgccaaagactggtggtccggaggaggagtccacagaggggatgaccggggaa
gaggcagagggatgggaggtgaacgacttggccgaccctagcgtccagaggccccaggcg
gttgagcccccgctgcccccaggatgggaggagaaggtggacaacctgggcagaacctac
tacgtcaaccacaacaacagatctacacagtggaaacgacccagcaatgtggatgttgtt
tcagaggtggagaatgacaatcagcagcgtgcaaacaacatccaggctcacagagtgttc
cactccagacgacacatctctgagaacctcgaggatgaacacatagaacccagggacatg
gatgacttatgggatccaatcacagaagagagtccagacgacctgcttccaggccccctc
tcctccatcatgtcgatgcccaccccccagacgccgccgcccccgcctcaccaggagttt
tcagaggagatcaacctgcgcctgtccctcacaccgacccctggccccggcctccacgcc
cccccgcccgacatcaatggagaggtggccggacccagccatgcctctgctgtgcagtgt
catctctcttccagactgcgttcctccactatgacagatggggtcagtgaccaagcccag
cctcctccggcgtctcagtcggcagcctatgccctgaccacaccaggcctgcctccggga
tgggaggagaggaagaacgccaagggacgcacgtattacgtcaaccataacaaccgctgc
accacctggaccaagcctatcctacagggggtggccaacaacatagcggtgcgtctggcg
gtgaaggagaccctctccaacccccagtctccccagccctccccctatagctcccccaag
tcaggacacaagccccagcagagcttcctgcccccggggtgggagatgaggatagcaccc
aacggacgacccttcttcatagaccacaacggcaggctcactacatgggaggacccgagg
ttgaagtacccagttcacatgaggaccaaggcctctctggaccctggtgacctggggcct
cttcctcctggctgggaggaacgggtgcatgcagacggcaggaccttcttcatagaccac
aacaccaaaaccactcaatgggaggatcctcgtctacaaagcccagccatcacagggcct
gctgtgccgtactccagagaattcaaacagaaatacgactacttcagaaagaagttgaag
aaaccggtggacatccccaataggtttgagatgaagctgcacaggaccaacatctttgag
gagtcgtaccgacgcatcatgtctctgaagagaccagacatcctgaaggcccgcctctgg
atcgaatttgaatcagagaagggcctggactacgggggcgtggccagggaatggttcttc
ctgctctccaaagagatgtttaacccttactatggactgtttgaatactcagccacagat
aactacacactacagatcaaccctaactctgggctgtgtaacgaggaccacctttcatac
ttcaagttcattggtcgagtggcagggatggctgtgttccatgggaagctattagacggc
ttcttcatcaggccattctacaagatgatgctggggaaacagatcacactgaaagacatg
gagtcagtggacagtgaatactacaactctctgaagtggatcttggagaatgatcctact
gagctcgacctgcgattctgtatcgatgaggataactttggacaaacgtaccaggtgtat
ctgaaacccagtggtagtgatatggtggtcaccaatgacaacaaaatggaatacatagac
cttgtcatccagtggcggtttgtgaaccgggttcagaaacagatgaacgccttcttggag
ggattcactgaactcattctcatcgacctcatcaagatatttgatgaaaacgagctagag
ctgttgatgtgtggtctaggtgatgtggatgtgaatgactggagacaacacacagtctac
aagaacggatactgccccaaccacccagtcatccagtggttctggaaagctgtgctgctg
atggatgctgagaagaggatccgtctgcttcagtttgtcaccgggacatccagggtcccc
atgaacggctttgctgaactctatggttccaatgggcctcagttgttcacaattgaacag
tggggaacacctgacaaactgcccagagcacacacctgcttcaacaggctagacctgcct
acctacgagtcatttgacgacctgcgagagaagctgttgatggctgtggagaatgctcaa
ggcttcgagggcgtcgactaa
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