KEGG   Coregonus clupeaformis (lake whitefish): 121582741
Entry
121582741         CDS       T08357                                 
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121582741 (nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121582741 (nup54)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121582741 (nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 121582741
NCBI-ProteinID: XP_041754742
LinkDB
Position
15:complement(56792801..56815940)
AA seq 568 aa
MAFNFGGAATNPASTSGLSFGSFAAKTTAPSAFGFAMTTTSASSGFGTGLAAPGFGTTTT
AAAPAGFGGFGTTTTGFGGLGAGSTTSGAFGGFGTTTTSAAAPGSTFSFAAPASTTGGLF
GNTQNKGFGFSSGLGTGTTTAAGFGTGLGTTLGGGFGGFNIQPQQQQQGSFFGQQAQAPA
QSNQLVHTANALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNQLPPVDFTQENPFCR
FKAVGYSCIPGSKDEDGLVVLALNKKEADVRSQQQQLVESLHKVLGGNQTLTVNVEGVKA
LPDDQTEVVIYVVERSPNGTSKRIPATTLYSYVEQANTKAQLTQLAVFMSVTRTELSPAQ
LKQLLANAPAGVDPIIWEQAKVDNPDADKLIPVPMVGFKELLRRLKIQDQMTKQHQSRVD
IISNDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRV
QLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDGDLLREIRQHLKQQQE
GLSQLIIVIKDDVEDIKLIEHGLLDRLG
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggcgttcaactttggcggcgctgccaccaaccccgcaagcacttccggattatcattt
ggttcatttgctgccaaaacaacagcaccctcagcttttggctttgccatgaccaccacc
agtgcctcatcaggatttggtacaggtcttgcagcccctggtttcgggaccaccaccact
gctgcggcacccgctggcttcggcggcttcggcaccaccaccacaggatttggggggctg
ggagccgggagcaccacgtctggtgcttttgggggttttgggacaaccactacatccgct
gctgcgcctgggtccactttcagcttcgccgctcctgcaagcacaacaggaggactgttt
ggtaatacccagaataagggatttgggttctcctctgggctgggcactggtactaccact
gcagctgggtttggaacaggtctggggacaactctaggaggtggatttggtggcttcaat
atccagccacagcagcaacagcaaggaagcttttttgggcagcaggcccaagccccggcc
cagtctaatcagctcgtccacacagctaacgccctgtctgcccccaccctgctgggggac
gagagagatgccatcctggccaagtggaatcagctccaggccttctggggaacaggcaag
ggctacttcaacaaccaactgccccctgtagacttcacacaggagaaccctttctgcagg
ttcaaggcggtgggctacagctgtatcccaggcagtaaggatgaggatggtctggttgtc
ctggccctcaataagaaggaggctgatgtccgtagccaacagcagcagctggttgagtct
ctacacaaggtgctgggagggaaccagactctcaccgtcaatgtagagggagtcaaagcc
ctgcctgatgaccagacggaggtggtgatctatgtggtggagcgttctcctaacggcaca
tctaagaggatcccagctacaacactgtacagctatgtagagcaggctaacaccaaggcc
cagctcacacagctagcagttttcatgtctgttacacgcactgagctctcaccagcacag
ctcaaacagctgctggcgaatgcaccagcaggtgtggatcccatcatttgggaacaggca
aaggtagataaccctgatgctgacaagttgatccccgtccccatggttggtttcaaagaa
ctgctccgcagactgaaaattcaggaccagatgaccaaacagcaccagtccagagtagac
atcatctccaatgacatcagtgaattgcagaagaaccaggcaacaacagtggctaagatc
gctcaatacaagaggaagctgatggatctctctcacagagtactacaggtgctgatcaag
caggagattcagaggaagagtggctatgccatccaggtggatgaggagcacctaagagtg
cagctggacaccatccagtctgaactcaatgcccccacgcagttcaaggggcgtctgaac
gagctgatgtctcagatccggatgcagaaccactttggcgcggtgcgctcagaggaacga
tatagtgtggacggagaccttctcagagagatcagacagcacctgaagcagcagcaggag
ggtctgagtcagctgatcattgtgatcaaagacgacgtggaagacatcaaactgatagaa
catggcctcctggacagactcggctga

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