Coregonus clupeaformis (lake whitefish): 121582752
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Entry
121582752 CDS
T08357
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582752 (sec16a)
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121582752 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
121582752
NCBI-ProteinID:
XP_045081155
LinkDB
All DBs
Position
15:58431899..58511079
Genome browser
AA seq
2341 aa
AA seq
DB search
MQPPPRTGPPGASGTPPAGGGPNAFRRTRPHKQTGAVAMAGLPAQPMTDPFAFGRQAPMA
TGGHPPPPNSSPLPMQAPPPGMYHQAGMGQGLHQPQLLDGAQAGAVPIGPPQPSTPVVSL
LTPHSTVSPVPFPRQLPGPPGHAPPSAEQGYFNSREPAPSMTPGPLPMASAPMSGQAPYG
QDHGGDHPPQAMPFKPVPPVLSQWVPDHGSRPPSVQNYFQPTSDPLPQAYNAPPQSQIPP
HTPSPHSTPPTHPQQQPPPQHPDRPTSSQWPDLAGANAPQQHNSTFQAQTYFSQSSASQD
SWFNQHPQDLAYHQMGAGPGLARPDSARSHYRPDSAGSHHGSHHGSYHGSTPGPVPVPFV
PDGTISMFFKGNDVENEETLAGEGGRAVNGLQDFQPSHNHQQMSSPQPQANLVARAEATH
CGPPPQAGQSLTYMNDGNVPGAGKPVQQKPVEAQFDHVENLECVPNQEVLPSEPQSSPAA
APTHGGDCYEAGPNLETPDSVPRPIRSASVSSSYSNLSHGSGTGTVPRKHQGVVGTFIQQ
ESPRPSEDALSSAAAGGYFEQIDTSPAGDMAAAYQSIPERMCHSQPPTPSPPKPTGIFQA
SANSSFEPVRSHSVAVRPAEVDRARMVAERGSDSLPGNQEQPPDNLENIYGAATGHTQAG
NGAGAPPLAYPLSHSHSRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILLIPAAPPVL
APLREPSAEVIQPPEDVLLDLQPPQRAPPPSQHPSENLENPPKVSEGEPSDPQPNLGYAS
LLVSESLHRPVLIAPPTSNYSVIPPSNPALAANQISPREATLPVRPPSQAQGASAAQPGP
PLSSNQNPLFAPTPMSFSAASSQSPLNLVRDDREGVKPEITPLPSQPARPPLSKGQSMCG
NSHSSLPVNLQAPLPAASAAPAAANYNQLSNYELLDFSMHQSQIPNQATGLPPLSLQQGL
PLASNAPGFYLQVTKDAQQGGRGNGDASTAQITAEPMPPPVAPNTQQPSMVPNPQPGHQG
QGDDPAAPLSGAPPPQGQYPHLMQGPARGNAPTPSAAYPGPRGPVPLANPPPPGTGVPPA
QPAPTDQPRPPSSLGSQQGYGPPPPGQVYGGYYGGAYPEYPDGRASYPPAQYPPAPVDPR
AQQYYQVHIQDDPYMRADPRYSRYEGANPAYPLYREPQPERPSSRTSQYSDRPSSRQGLL
PEDYQRANRSAYDDYYAEYYKNQYGDRSRWEGYNASAGAYDPRYRDYYDQNYWYNYNPEA
YRGREAAYYNQQPTQQYPAATARPHGYDDQWRYYPGYDASFDDDYRRQRDPYRDDFDRRS
VHSEQSAHSLHSSQSHRSRRSSFSSRSQQSEVYRSQPDLTAVYDPTVSTLPVDYSYGQYP
EQTDPGQSFSQYPYTSGYQADDSTWVAAEQPPPRPVTPEKYSVSHRCARFGPGGQLIQVL
PNLPSAGQPALVEIHNMETMLQDTPDQSELRSFPGPLLKEETHKVDVIKFSQNKGLECAR
NNDLLDKDSAALLWDFIVLLCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLIDFNN
EPLARAEEEPGTGPLSLLSDTFMIVPENVGKETERFRELLLFGRKKDALEAAMKGALWGH
ALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASATCCGDEKWGDWRPHL
AMVLSNLTHTLDLDTRTITTMGDTLASKGLTDAAHFCYLMAQVGLGVFTKKSTKMVLIGS
NHSLSFFQFASNEAIQRTEAYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLCAQAFHY
CEVISRSVLMQPSYHSPVFTSQLIQMSEKMRFFDPQLKEKADQELFNEPEWLINLRQLDG
QMRTGVIAYNADRATPQQYDCSTPSSELDQASPPEPYAQPLDMDGHTSDNPLMTSLMPGP
PPQGVQLMPPAPSTIFQDGMVSQPLPPNEGVQFYPVPPSLPAPPGQIPLSGFPPQGSGFA
LPYQPQQPQPDQPDMFAGAQHQQMVPPQHQQQMMPLQMQQPQMMPSADNQSTGPPELQPP
PMSTSPQRNTFTPQMDFYDQMAHMGPGRRSRTTSQSSMHMQPPGRRSRTMSESSTHSGGR
ERSNSAAKQSSPPPPSIPEQPKKDSPKKGGGGGSWLNWLYRKGKNEAHLPDDKNKSIVWD
EKKQKWVNLDEPEEEYKPPPPPPSGFPKMLGPMPGQGGPGGPPTGGPPVNMFSRRAGTKS
RYVDVLNPGGPRAKPGGSAPAPSDFFAPLAPMPANLFVPGAEEQQPMEGNVPETGGNQEQ
SDPNPSAVPQVPPTPQPPPQGAPPSGGVTFYDPAQFAQTSTPSGRLLSGRLGGQRAYPVL
K
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggaccggccccccaggcgcatccggcacccctcctgccggcggt
gggcccaacgccttccggaggacgaggccccacaagcaaacaggagcagtggccatggca
ggactacctgcccagcccatgacagaccccttcgcatttggcaggcaagcccctatggct
acaggtggtcacccgccgccacccaatagcagccctctgcctatgcaagccccgcctcct
ggtatgtaccaccaggctggcatgggtcaggggctgcaccaaccacaactactggatggt
gcacaggctggggctgtgcccatcggcccaccacagccctctaccccagtggtaagcctc
ttaacccctcacagtactgtgtcccctgtacctttccctagacagctacctggcccccca
ggccatgcaccacccagtgcagagcagggctattttaactctagggagccagcaccctcg
atgaccccagggccccttcccatggcctcagcccctatgtctggccaagcgccttatggc
caggaccacggaggagaccatccccctcaggcgatgccctttaagcctgtgcctcccgtt
ttgtctcagtgggtgcccgaccatgggagccgccccccgtcggttcagaactatttccaa
cccactagtgatcctctaccccaggcttataacgcccctccccagtcccagatacctcca
cacacaccctcgccccacagcacccctccaacacacccccagcagcaaccacctcctcag
cacccagacaggccaactagctcccaatggcccgacctggcaggtgcaaacgcaccccag
caacacaactccacttttcaggctcagacctacttcagccagagctcagcctcccaggac
tcctggttcaaccagcacccccaggacctggcctaccaccagatgggagctggccctggc
ctggctcggccagactcagccagatctcactatcggcccgactcggccgggtctcaccat
ggatcccaccatggctcttaccatggatcaacccctggcccagtgccggtccccttcgtc
ccagacggcaccatctccatgttcttcaaaggaaacgacgtggagaacgaggagaccctt
gccggcgagggaggcagagcagtgaatgggctccaggactttcagccctcccataatcac
cagcagatgtcttcccctcaaccccaagccaacctggtggctcgtgcagaggccacccac
tgtgggccccccccacaagctggccaatcgttaacctacatgaacgatggtaacgttcct
ggagctggcaaacccgtccagcagaaacccgttgaggcccagtttgaccatgtggagaac
ctggagtgtgtgcccaaccaggaggtcctacctagcgagccccagagcagccctgctgca
gcacccacccatgggggagattgctatgaggcaggccccaatctggagacccccgactct
gtaccccggcccatacgctctgccagcgtgtcctctagctacagcaacttgagccacggc
agcggtactggtacagttccacgcaagcaccaaggagtggtaggcaccttcatccaacag
gagagccctcggccctcagaggacgcactctcctcagccgctgccggaggctactttgag
cagattgacacctctccggccggggatatggccgctgcttaccagagcatcccggagaga
atgtgccacagccagccccccacacccagtcctcccaaacccaccggcattttccaggcc
agcgccaactcctcctttgagcctgtgcgctcacacagtgtcgcagtgcgcccagcggag
gtggaccgtgcccggatggtggcagagaggggctctgattcactgcctgggaaccaggag
cagcctccagacaacctggagaatatttacggagcagctacagggcacactcaagctggg
aatggagctggggcacctcctcttgcataccctctgagtcactcccactccaggccctcg
tcccgggctcatgtggcccaccggccctgtgagagccctgccaccaccctgtgggcccag
cacgaccccgctagcctgggaaccaacattctgctgatccccgctgcccctccggtcctt
gccccactgcgagagcccagtgccgaggtcatccagccccccgaggatgtcctcctggac
cttcagcctcctcaacgcgcccctccaccctcccagcacccctcggagaacctggagaac
cctcctaaggtgagtgagggggagccgtccgacccacagcccaatctgggctatgcctct
ctcctggtgtctgaatctctccaccggcctgtgctgattgccccacccacctccaattac
agcgtgattcctcccagtaaccctgcactcgcagccaatcagatcagccccagggaggcc
accctacctgtgagaccgccctcgcaggctcaaggggccagtgccgcacagcccggtcct
cccctgagctccaatcagaacccattgtttgctcctacaccaatgagcttcagcgccgcc
tctagtcagagccccctcaatctggttcgggacgacagggaaggggttaaaccagagatc
acgcccctaccgtcccagcctgcccgcccccctctctcaaagggccaatcaatgtgcgga
aacagccattcttctctacctgttaatttgcaggctcctcttcctgctgcatctgctgct
cctgctgccgccaattataatcagctgtcaaattacgagctgcttgatttttctatgcac
caatctcagatcccaaaccaagccacagggctgccacctctctccctccagcagggcctg
cccctggcgagtaacgcccctggattttacctgcaagtcaccaaagatgctcagcagggg
ggtagaggcaatggggatgcctccacagcacagataactgccgaacccatgcccccccca
gtggccccaaacactcaacagccatccatggtacccaacccccagcctgggcaccagggc
caaggagatgaccctgcagcccctctcagtggagcaccaccaccccaagggcagtaccca
cacctaatgcaggggcctgccagggggaatgcacccaccccctctgcggcttaccctgga
cctcggggacctgtgcctctagccaacccccctccaccaggaaccggggttcctccagcc
cagccagcccctacagaccaaccgcgacctccctcgtctctggggagccagcaggggtac
ggcccccctcctccagggcaggtgtatgggggatactacggaggtgcctacccagagtac
ccagatggcagagcatcatatcctcctgctcagtacccacctgcacctgttgaccccaga
gcacagcagtattatcaggtacacatacaggatgacccatacatgagagcggaccctcgc
tacagcagatatgaaggagccaacccagcctaccccctatacagagagccccagccagag
agacccagctccagaaccagccagtactcagacagaccctcctccaggcaaggtctcctt
cccgaagactatcagagagctaaccgaagtgcttatgatgactactatgcagagtattac
aaaaaccagtacggagaccggagcaggtgggagggctacaatgcttcagcaggcgcttac
gacccccgctacagagactactatgaccagaactactggtacaactacaaccctgaggcc
taccggggcagggaggctgcctactacaaccagcagcccacccagcagtaccctgccgcc
accgccaggccacatggctatgacgaccagtggcgctactatcctggttacgatgccagt
tttgacgatgactaccggcggcagagggacccgtacagggacgattttgacagacggagc
gtccacagcgaacagtcggcccacagtctacacagctcccaaagccatcgcagccgacgc
agcagctttagctcccgctcacaacagagcgaggtgtataggtcccagcctgacctgaca
gcggtttacgaccccactgtgtctaccctgcctgtggactactcctatggacaataccca
gagcagacggaccccggacagagcttcagccagtacccctacacctcgggctaccaggca
gacgacagcacctgggttgccgctgagcagcctcctcctcgtcccgttactccagagaag
tactcggtatcccaccgctgtgcccgcttcgggccagggggtcagctgatccaggtcctg
cccaacctcccctcggccggccagcctgctctagtggagatccacaacatggagacgatg
ctgcaggacacaccagaccagtccgagctgcgctccttccccggaccgcttttgaaggag
gagactcacaaggtcgacgtgataaagttctcccagaacaaaggcctggagtgtgcccgc
aacaacgacctcctggacaaggactcggctgccctcctctgggacttcatcgtgctgctg
tgtaggcagaacgggaccgtggttgggacagacatagctgatctgttgctgaaggagcat
cgctcagtgtggttgccgggcaagtcgcctaatgaggccaacctgattgacttcaacaac
gagccactggcgcgggccgaggaggagcctgggacgggaccactgtccctcctatcagac
accttcatgattgtccccgagaacgtcggcaaggaaacggagcgcttcagggaactgctg
ctatttggtcgcaagaaggatgccctggaggcagccatgaagggagctctgtggggccac
gccctgttgttggccagtaagatggacagccggacacacgctcgcgtcatgaccaggttt
gcgaacagtctgcccatcaacgaccctctgcagacagtgtaccaactgatgtctgggagg
atgcccgcctcagctacttgctgtggggatgagaagtggggcgactggcgcccccatctg
gccatggtgctgtccaacctgacccacactttggacctggacacacgcaccatcaccacc
atgggagacactctggcttccaaggggctaaccgatgcggcccacttctgttacctgatg
gcccaggttggtttgggggtgttcaccaagaagagcaccaagatggttctaatcggctca
aaccacagtctgtcgttcttccagtttgcgtctaacgaagcgatccagaggacggaggcc
tatgagtatgcccagtctctgggctcccagccctgctccctgcccaacttccaggtgttc
aagctgatctatgcgtgtcgcctggccgaggccggcctgtgtgctcaggccttccattac
tgtgaggttatctccaggagcgtgctcatgcagccgtcctaccactctcctgtgttcacc
agccagctcatacagatgtctgagaagatgcgattcttcgatccacaactgaaggagaag
gcagatcaggagctcttcaacgagccagagtggctgattaatctgagacagctggatgga
cagatgaggactggggtgattgcatacaatgcagacagggctactcctcagcagtatgac
tgcagcacccccagttctgagttagaccaggccagcccgcctgagccatatgctcagcct
ctggacatggatggccacacctccgacaaccctctgatgacatcactcatgcccggaccg
cctccgcaaggggtgcagctgatgcctccagctccctcgactatcttccaggacggcatg
gtctcccagccgctaccccccaacgagggggtccagttctacccagtaccccccagtctc
cctgcaccacccggccagatccccctatcagggttccctccccaaggctctggctttgcc
ctaccttaccaaccccagcagccccaaccggaccagcctgacatgtttgctggagcccag
caccagcagatggtgccaccacagcatcagcaacaaatgatgcccctgcaaatgcagcag
ccacagatgatgccctctgccgataatcagtcgacgggtccaccggaactacagcctcct
cccatgtccacctctccacagaggaacaccttcacgcctcagatggacttctatgaccaa
atggctcacatgggcccaggaagaagatccaggactacttcacagtcctcaatgcacatg
cagcctccaggtcgccgctcccgcaccatgtcggaatcttccacacactccggaggacga
gagaggagcaactcagcagccaagcagtcctctccacctccaccctccatccctgagcag
cccaagaaggactcacctaaaaaggggggtggtggtggcagctggctgaactggctctat
aggaaggggaagaatgaggcccaccttccggatgacaagaacaaatctattgtctgggat
gagaagaaacagaaatgggtgaacttggatgagccagaggaggagtacaagccccctcct
cctcctccctcgggcttccctaagatgttgggacccatgccgggacaagggggtcctgga
ggtccccctactggtgggccgcctgtcaacatgttctccaggagagcaggtactaagagc
cgctacgtggatgtcctgaacccaggtggaccccgtgccaagcccggtggatcggcacct
gccccgtcagacttctttgccccgttggctcccatgccagccaacctgtttgtgcctgga
gcagaggagcagcagcccatggagggtaatgtcccagagacgggagggaaccaggaacag
agtgaccctaaccccagtgctgtgccccaggtgcccccgactccgcagcctcctccccag
ggagctccaccctctggaggcgtgacgttctatgaccccgcccagtttgcacagacgagt
actccatcgggacggcttctgtctggccggttgggcggtcagagggcatacccagtgctg
aagtag
DBGET
integrated database retrieval system