Coregonus clupeaformis (lake whitefish): 121582767
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Entry
121582767 CDS
T08357
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121582767
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121582767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
121582767
NCBI-ProteinID:
XP_041754794
LinkDB
All DBs
Position
15:complement(22900095..22926128)
Genome browser
AA seq
1414 aa
AA seq
DB search
MMNPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISISALGVGSGMEAMGATAP
PTPTVTIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHTTPSAL
RGSTSTLTSSTALPSSVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQP
VATATATGTKMILVSTKMIHKPAELNNGIKKEVSSKDVARIWVNDDMKVRSFSPTLKLPG
MKEEEEAEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPNVWYRMSIP
EETVDRGWLSALQLEAITYAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLL
GRKRSLWFSVSNDLKYDAERDLKDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATY
SSLIGESQSGGKYKTRFKQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLE
LQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIV
AMDMKLRGMYIARQLSFTGVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEA
EQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLE
ALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRQKLFSLLGIDLSAKKTPSPSEAAAEQK
GKKRKAGAEIKKPEKRKRKSGGLSGSSSDDSDSEESDKDDAESDNSFKSVSSGEDDEDDF
NPFKDDSSEDEEDDPWLSGKRKEAKKGKEKKNKKKTKKKSIDPDSIHSALLASGLGSTRP
AFTTPIVKTSSTPAIAKVEADDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDEL
IDELGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAI
ISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLIS
ELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLD
SPLVNPPSDFEGDFYKEIRHGLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQE
QNALFQYFSDTLAAVIQNAKKNGRYDMGILDLGSGDEKVKKIEAKKFLTPGYSTSGHVEL
YTVSVERGMSWEDATHAWAEQSGPDDGFYVQIRNNKKTAILVQEVNSKKRLFLVYRPNTG
KQLKLETYADIKKKCKKVLSDDAKQHWIDQYKSSAEICAHAYWRGNCKKMSVGLQCEVGL
RCRTYYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLT
NILSSSDQSQQLAVQQQQKWQQLHPQSLSHIHNT
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcctggacaggatttgctcctggcagccctgagcgagagcggcatctgccct
aacgacctgttcgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcagtgccctcggtgttggctcggggatggaggcaatgggagccacagctcca
cccacacctacagtcacaatcaggcacaagccgcagccctcaaccaccacatttgtctta
aatcaactgaatcagttgccatcgctgggaacaattgttgtgaccaagccctcaactgga
ggcacggccagacacaccatcacagtcaccaaggtggtccataccactccctcagcccta
cggggatccacttccacacttacctcctccacggctctcccctcctcagtctccacagtg
gttccttccaacagagagcagatccagctgaaggacctgttgaggacgggcagcaccatg
aaaagcagtagtctggtggaactcatgaggctcaagccgccaccagacatcgcccagccg
gtcgccacggcaacagccacaggcaccaaaatgatactggtctcgacaaagatgattcat
aaaccagcggaactgaacaacggaataaagaaggaggtgtcaagtaaagatgttgctcgg
atctgggtgaacgacgacatgaaagtgcggagcttctcacctacactaaaactcccaggg
atgaaggaggaagaggaggctgaggaagaggaggatgaagagttgggtcatgctgagaca
tacgctgagtacatgcccatgaaactgcggatcgggctgcgtcacccagacccggtggtg
gagaccagctccctgtccagtgtgaaccctccaaatgtttggtacagaatgtctatacca
gaagagaccgtcgaccgcggctggctgtctgccctgcagctggaggccatcacatatgct
gcccagcaacatgaaacattcctccctaacggcgaccgagcgtcctatctgataggagac
ggggccggagtggggaaaggccggaccattgctgggatcatctacgagaactacctcctc
ggcagaaagagatcactctggttcagtgtttctaatgacctgaagtatgatgcggagagg
gatctgaaagacataggagcaaagaacattctggtccattcactaaacaagtttaagtat
ggtaagatctcgtccaaacacaacggcagtgtgaagaagggggtgatcttcgctacgtac
tcctctctgataggagagagccagtctggagggaagtacaagacccgcttcaaacagcta
ctccactggtgtggagaggacttcgacggagtcattgtgtatgacgagtgtcacaaagcc
aaaaatgtctgtcccatcgggtcatccaaacccaccaagactggactggcagtcctggag
ctgcagaacaaactgcccaaggcacgggtggtgtacgctagcgccactggtgcgtctgag
ccccgtaacatggcctacatgaaccggctgggcatctggggagaggggacacctttcaga
gagttcagcaactttatccaggctgtggagcgcagaggtgttggtgccatggagatagtt
gccatggatatgaagctgaggggcatgtacatcgccaggcagctgagcttcacaggcgtc
acgttcaaaatcgaggaggttcccctgacaacacactacatcaagatgtacaacaagtct
gtacgcctgtgggtggctgcgcgggagaagttccaggcggctgctaacttgatggaggca
gagcagcggatgaagaagtccatgtggggtcagttctggtcagcccaccagaggttcttc
aagtacctctgcatcgcctccaaggtccgcagggtggtgcagctcgccagggaggaggtc
aaaaacggaaagtgtgtcgtgattggtcttcagtcgacaggagaggccagaacactagag
gccctggaggaaggaggaggagagctcaacgactttgtttccaccgcaaaaggcgttctg
cagtccttgatagagaagcacttccctgctccagacagacaaaagctgttcagcctgctg
ggcatcgacctgtcggccaagaagacgccatctcccagcgaggccgccgcagagcaaaag
ggcaagaagaggaaagcaggtgctgagataaagaaaccagagaagcggaagagaaagtct
ggtggtctgtcggggagcagttctgacgacagcgattcggaggagtcggataaggatgat
gcggagagtgacaacagcttcaagtccgtcagctcgggagaagatgacgaagatgacttc
aatcccttcaaggatgattccagcgaggatgaggaggatgacccctggctgtctggaaag
aggaaagaggcgaagaaaggcaaggagaagaagaataaaaagaagacgaagaagaagagc
attgatccagactctatccacagtgccttgttagcctctggtctgggctccaccaggcct
gctttcaccacccccatagtcaagacctccagcacacctgccatagccaaggtagaagca
gatgacagctgtatgaccagtcaggatgctgtggaagatgctcagcagatgaagagggat
ctgttggaccagctggagaagctggctcaggatctaccccccaacactctggatgaactc
atagacgagctgggaggacccgataacgtggctgagatgacgggtcgtaaaggccgggta
gtcagtaacgacgacggcagcatctcctacgagtctcgctctgaattggacgttcctgtg
gagatcctcaacctcacagagaaacagaggttcatggacggagagaagaacatagccatc
atctcggaggcggctagctccggtatctccctgcaggctgaccggcgggtgaagaaccag
aggaggagggtccacatgaccctggagctgccctggagcgcagaccgagccatacagcag
tttgggaggacccacaggtctaaccaggtgacggctccagagtacgtgttcctcatctct
gagctggctggggaacagaggtttgcctccattgtggccaagagactggagagcctgggt
gccctcacccatggagacagaagagcaacagagacgagagatctcagcaggttcaacttc
gacaacaaatacggtagaaacgcactggagatcgtgatgaagtccatcgtcaacctggac
tctccgttagtgaatcctccctcggacttcgaaggggatttctacaaagagatccgtcat
gggttgatcggagtgggtctgatcaatgtggaggaccgatcagggattctgtctctggac
aaagactacaacaacatagggaagttcctgaaccgtatcctggggatggcagtgcaggag
cagaacgctctgttccagtacttctctgacacgctggcagctgtcatacagaacgccaag
aagaacggacgctacgacatgggcatcctggacctgggttctggggatgagaaggtgaag
aagatcgaagccaagaagttcctgaccccaggctactccacctcaggacatgtggagctc
tacacggtgagtgtggagagaggcatgtcctgggaggatgccacccacgcctgggccgag
cagagtggaccagatgatggcttctatgtacagataaggaacaacaagaagacggccatc
ttggtgcaggaggtgaacagtaagaagaggctgttcctggtctacagaccgaacacgggc
aaacagcttaaactggagacctacgctgacatcaagaagaagtgtaaaaaggtgctgtca
gatgatgccaagcagcattggatcgaccagtacaagtcttcagctgagatctgcgctcat
gcttactggcgtggtaactgtaagaagatgtcggtgggtctgcagtgtgaggtgggtctg
cgctgcaggacgtactatgtgctgtgtggctctgtgctcagcgtgtggaccaaggtggag
ggggtcctggcctccgtcagcggaaccaatgtcaagatgcagatcgtccgcctcaggaca
gaggacgggcagaggatcgtgggcctgatcattccagccaactgcgtctctcctctgacc
aacatcctgtcctcatctgaccagtctcagcaacttgctgttcagcagcagcagaagtgg
cagcagctgcaccctcagagcctcagccacatacacaacacatag
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