Coregonus clupeaformis (lake whitefish): 121582782
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Entry
121582782 CDS
T08357
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121582782 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582782 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cclu02044
]
121582782 (sec31a)
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121582782 (sec31a)
Secretion system [BR:
cclu02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121582782 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
TPR_Sec16
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Prp18
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121582782
NCBI-ProteinID:
XP_045080989
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Position
15:22416364..22441479
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AA seq
1640 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTTASLEIFELDLADPSLDMKLR
GAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGHSDVVIAQSDK
HSGPVRALDVNSFQTNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGSSQAFSQTQADTISTSFGNMDPFG
MGQTLPPLQLPKAPAAHTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPQQP
TAHVVHISQVITETTFLERSAQLQDTLAAGSFIDFCQEKIDSAQNEFEKTVWSFLKVNFE
NDTRGKYLELLGYKKEELAAKIAAALEGEPIQPEEPAPAPVPTSDPELEAEPGPEVVPIP
APQLSAEPEVLPPMPEAAVEATPEPPLEPALQPEPGPQPELAPPLSRDLSPSDPMPVLQS
EPVPTLDLSAEPQLLAPVAPIALLPESDPALALPADLQQVPVFDPTASFTLQPPTEFNQV
NSLPVSEFDQVALQHVLEFDLVALQPVSQFNQVDLQPVSAFNQVDLQPVSDLTNLQPVPG
FDPMSSMPSLQPAAQLDLVPPPVPTLQPLADPGLLSTDLPPEDAFDLIAATNLQQAAELE
LTPAPEPEAEDPFDLIAATNLQQAAEPELTPAPEPEAEDPFDLIAATNLQQAAEPELTPA
PEPEAEDPFDLIAAANLQQAAELEVTGALEPVAAEVDLTEAEAPEAEPIAQEEMPVDEEI
PLEEEVAPPVEEEDSLPEEAPAPVPEGVKLCVSQGVDGLITQALLTGDFEGAVELCLHDN
RMADSIILAIAGGAELLEKTQRKYFTKTHSKITKLISAVVMRDWRDVLQTCELQNWKEAL
AAVMTYAQPEEFSSLCDLLGCRLEAVEDSTLQAQACLCYICAGNVEKLVSCWTRAQDRHC
PLSLQDLVEKVVVLRRAVEQTQESGPSAVGLLLGEKMSQYASLLASQGSLTTAIAYLPQN
TEQVAVLQLRDRLSRALGQQAPAAGPALTPVAQVQPQLPSPQPRQLFAPAQPSMVSQQPA
PAPVPAAAPAPQQYYQPVRSASTVTSWSNQTPTALPSVPPPPPHLGPATTEPQAQPTPAM
YGMPPTGSAAPPDSSAAAYPPMYSHQYQPYPPASQYNPGTGGPAIYSPLQYSTPPPPSFS
SSSPQAPAPGFMPQYTQQPLYPPPSMGQPVSSAPPSHPPFSPPPLSSGASFQHGGPGSPA
SYMPPLPPTGSSGTQPDPASQRTEGYSPDTTCFMEGEGPQNGWNDPPTLSRVPKKKKVPE
NYTPPSPITAPIFSPLGAGDPQQPPSMPPGQAQNQAPYQGMQQQQQMAPPPMNPGMLKTR
GGSVEGAPGAPIGDVIHPLQSIPAEKITKKPIPEEHLILKSTFEGLIQKCLAAATDPQTK
RKLDDANKRLEALYDKLREQTLSPAIVGGLHNMVQCIESRSYMESLNIHTHIVSSSNFSE
TSAFMPVLKVVLTQANKLGV
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaagagatcaaccgcacggccatccagagctggagcccagcacagcaccat
cctgtgtacctggcagcaggtacgtcagcccagcagttggatgcctccttcagtaccacc
gcctctctggagatctttgagctggacctggccgacccttctctggacatgaagctccgc
ggagcatactcctcctctcacagataccacaagctggcgtggggtccccatggcatggat
gcacagggtctcccatctggagtgctcatcgcggggggagagaatggtgacgtcatcctg
tacgacccggccaagatcattgctggacacagtgacgttgtcatcgctcagagtgacaaa
cacagcgggccggtcagagcccttgatgtcaactccttccagaccaacctggtggcttca
ggaggtaatgaatcagagatctacatctgggacctgaacaactttggctccccgatgaca
ccaggccctaaaactcagcctctggaggacatcagctgtgtggcgtggaacagacaggtc
caacacatcctggcctcggccagccccagcggccgcgcctccatttgggacctccgcaag
aacgacctaatcatcaaagtcagcgaccacagcaacaggatgcactgctctgggctagag
tggaacccggaggtagctactcagctggtgctggcctcggaggatgacagaatgccagtg
atccagatctgggacctgcgtttcgccacctcccctctcaaagtcctggagaaccacaca
cggggtgtcctggccatcgcctggagtctagctgaccctgagctgctactgagctgtggg
aaggacaacagaatcctctgttggaaccccaacaccgccgaggtgctgtatgagctgcct
accagtacccagtggtgctttgacatccagtggtgccccaggaaccccgcggtgctgtcg
gctgcagccttcgacggacacatcagcatctactccatcatggggggcagcagccaggct
ttcagccagacacaggcagacacgatcagcacgtcgtttggcaacatggatccgtttggg
atgggacagaccctgccccccctgcagcttcccaaggccccggctgcccacaccaccatc
actcccctcaagaagcctcccaagtggatccgcaggcccgtgggggcctccttcgctttt
ggtggtaagctggtgtcgttggagaacatcaagcccaacccccagcagcctcaacagccc
acagcccatgtggttcacattagtcaggtgatcacggagacgaccttcctggagcgctcg
gcccagctgcaggacacgctggctgcaggcagcttcattgacttctgccaagagaagata
gactctgcccagaacgagtttgagaagaccgtctggtccttcctgaaagtgaactttgag
aatgacactcgtggaaaatacctggagcttttgggatacaagaaggaggagctagcagca
aagattgcagcagcattagagggagaacctattcagcccgaggagcccgcccctgctcct
gtccccacctctgatcctgaactcgaggctgaacctggaccagaggtagtgcccattccc
gctccgcagctcagcgccgagcctgaggtccttcctcccatgcctgaggcggctgttgag
gccacccccgaacctccgcttgagcccgccctccagcccgaacccggaccccagccagag
cttgcccccccgctcagccgtgacctttcaccttctgatcctatgcctgtcctccaatcg
gagcctgtccctactcttgacctcagcgcagaaccccagcttcttgcccctgttgctccc
attgctctcctgccagagtctgacccagctctggcacttccagctgacctgcagcaagta
cccgtgtttgatcccactgcctcctttaccctccagcctccgacagagttcaaccaagtg
aactcactgcctgtatctgaatttgatcaggtagctttgcagcatgtattagaatttgac
ctggtggccttgcagcctgtatctcagttcaaccaagttgacttacagcctgtttctgcg
ttcaaccaggtggacttacagcctgtatccgacctcaccaacctgcagccagtacccggc
ttcgacccaatgtcatcgatgcccagtctgcagccggcagcccagctggacttggttcct
cctcctgtccccaccctgcaacctctagcagaccctggactcctctccacggacctccca
cctgaagacgcatttgacctcatcgctgctacaaatctccagcaagcagcggaactggaa
ctcacacctgctccggaaccagaagcggaagatccatttgacctcatcgccgctacaaat
ctccagcaagcagcggaaccggaactcacacctgctccggaaccagaagcggaagatcca
tttgacctcatcgccgctacaaatctccagcaagcagcggaaccggaactcacacctgct
ccggaaccagaagcggaagatccatttgacctcatcgccgctgcaaacctccagcaagca
gcggaactggaagtgacaggagctctggaaccagtggcagcagaagtagacctgacagag
gctgaggcccctgaagctgagcccatcgcccaggaagagatgccagtagatgaagagatt
cctctggaggaggaggtggctccaccagtcgaagaagaggacagcctcccagaggaggcc
ccagctccagtccccgagggcgttaaactctgtgtcagtcaaggcgtggacggcctgatc
acccaggccctgctgaccggggacttcgagggcgcagtggaactctgtctccatgacaac
cgcatggccgacagcatcatcctggccatcgccggaggggcggagcttctggagaaaaca
cagaggaagtacttcaccaagactcacagcaagatcaccaagctgatcagtgcagtggtg
atgagggactggcgtgatgtgctgcagacctgtgagctgcagaactggaaggaggctctg
gctgcagtcatgacctacgctcagcctgaggagttctcctctctgtgtgacctgctgggc
tgcagactggaggccgtggaggacagcacgctgcaggctcaggcttgtctgtgttacatc
tgcgctggcaacgtggagaaactggtgtcctgctggaccagagcccaggacagacactgc
cccctctctctgcaggacctggtagagaaggtggtggtgctccgcagggcggtagagcag
acccaggagtctggtccctctgctgtggggcttctactgggcgagaagatgagtcagtat
gccagcctgctggcctcccagggcagcctcaccaccgccatcgcatacctgccacagaac
acagagcaggttgcagtactgcagctgcgtgaccgtctcagcagagctctgggccaacag
gctcctgctgcaggtccagccctaaccccagtagcccaggtccagccccaactcccatcc
ccccagcccaggcagctcttcgcccctgcccagccttctatggtgtcccagcagcccgca
ccagcccctgtgcctgccgctgcccctgcaccacaacagtattatcagccggtgaggtct
gcctctacagtgacctcctggagtaaccaaactcccacagctctccccagtgtccctcct
cctcctcctcatctaggccctgccaccacagagccccaggctcagccgacacccgccatg
tatgggatgcctcccactgggtcggctgcccccccagactcctcggccgctgcatacccc
cccatgtactcacatcagtaccagccctaccctccggccagccagtacaaccctggcact
ggtggcccagctatctattcaccgctccagtactctactcctcctcctccctccttctct
tcctcctcaccccaagccccagctccaggcttcatgccccaatacactcaacaacccctc
tacccacctccttcaatgggccagcctgtgtcctccgctcctccttctcatcctcctttc
tctcctcctccactgtcgtctggagcatctttccaacatggtggaccggggtcgcctgcc
tcttacatgccgccgcttccaccgaccggatcctcaggtacacagcctgatccggcctct
cagagaacagagggatatagtccagacactacctgtttcatggaaggtgaaggccctcag
aatggctggaacgaccctcctaccctgagcagagtgccaaagaagaagaaggttccagag
aactacaccccaccttcccccatcacggcccccatcttttctcccctcggtgccggggac
ccccagcagcccccctccatgcccccaggccaggcccagaaccaggccccctaccagggc
atgcagcagcagcagcagatggcccccccacccatgaaccctggcatgctcaagacacgt
ggaggaagtgtggagggagcgcctggagcccctattggagatgtcatacatccgctgcag
tccatccctgctgagaagatcactaagaagcccatccctgaggagcacctgatcctgaag
agcacctttgagggcctcatccagaagtgcttggctgctgccacagaccctcaaaccaag
aggaagttggatgatgccaacaaacgcctcgaggccctctacgacaagctacgagagcag
acactctccccagccattgtagggggcctgcacaacatggtgcagtgcatcgagtctcgt
tcctacatggagagcctcaacatccacacacacatagtgagcagcagcaacttcagcgag
acgtctgccttcatgcctgtgctcaaggtggtgctgacacaagccaacaagctgggggtc
tga
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integrated database retrieval system
