Coregonus clupeaformis (lake whitefish): 121582789
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Entry
121582789 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121582789
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121582789
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
Reprolysin_3
ADAMTS_CR_3
Reprolysin_2
PLAC
TSP1_spondin
Reprolysin_4
TSP1_CCN
Peptidase_M57
DAGK_cat
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
121582789
NCBI-ProteinID:
XP_041754824
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All DBs
Position
15:complement(22267314..22356819)
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AA seq
1148 aa
AA seq
DB search
MMEILRKTLTWILILSLVVVMASSEFQRFSHNSQEEYLSYLQHYQLTVPVQVDENGDFLS
YTVKHHRPGRRRRTTDPTSTTVGPEPTDHAEQDLAQTQVFYRLSAYGKHFHLNLTLNPHL
VSKHFTVEYWGREGLEWRHDMVENCHYVGYLQDQYSSTRVALSNCKGLHGVITTEEEQYL
IEPLKNISSATSSQWNQGEGQQHVIYKKSAIPSPQQQPNQHEFSCGISDLTKSVIPCQHS
TPSPTSPTSSSPSSSPTPAPGSNSTLPGGGHRQRRSLSTERFVETLVVADKMMVGYHGRK
DIEHYILSVMNIVAKLYRDASLGNVVNIIVTRLIVLTEDQPNLEINHHADKSLDSFCKWQ
KSILSHQGDGNSIPENGMAHHDNAVLITRYDICTYKNKPCGTLGLASVAGMCEPERSCSI
NEDIGLGSAFTIAHEIGHNFGMNHDGIGNSCGTKGHEAAKLMAAHITANTNPFSWSACSK
DYITSFLDSGRGTCLDNEPLKRDFLYPTVAPGQVYDADEQCRFQYGASSRQCKYGEVCRE
LWCLSKSNRCVTNSIPAAEGTLCQTGSIEKGWCYQGECVIFGTWPQSMDGGWGPWSSWGE
CSRTCGGGVSSSMRHCDSPAPSGGGKYCLGERKRYRSCNTDACPSGSRDFREKQCADFDS
MPFRGKYYNWKPYTGGGVKPCALNCLAEGYNFYTERSPAVIDGTRCQADSLDICINGECK
HVGCDNILGSDAKEDRCRVCGGDGSSCEATEGLFNDSLPRGGYMEVVQIPRGSVHIEIKE
IAMSKNYIALKSEGDDYYINGAWTIDWPRKFDIAGTAFHYKRPLDEPESLEALGATTENL
VVMVLLQEQNMGIRYKFNVPIQRTGSGDNEVGFSWHHLAWSDCSATCAGGSQKQEVLCKR
LDDNSVVQNSYCDPDNKPPENQRSCNTEPCPPEWFIGDWSDCGKTCDGGMRTRTVLCIRK
MGPAEEETLEDSHCLTHRPIEREACNNQSCPPRWVTLDWSECTPKCGPGFKHRIVLCKSN
DLTKTFPPAHCPPHNKPPVRIRCSLGRCPPPRWIPGEWGQCSAQCGLGQQMRTVQCLSYT
GKPSSECTEGLRPTAMQQCESKCDAVPIANGDECKDVNKVAYCPLVLKFKFCGRAYFRQM
CCKTCQGR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaattttgcggaagacgctgacttggatattgatattgagcctggtggtggtc
atggcttcctcagaatttcaaagattttcgcacaactcacaagaggagtacctgtcctac
ctgcagcactaccagctgactgtaccggtgcaggtggacgagaacggggacttcctcagc
tacactgtgaaacaccaccgacccggtcgcaggagacgaaccaccgacccaaccagcacc
accgtcggcccagagccaaccgaccacgccgaacaggacctggcccagacccaggtcttc
tacagactgtctgcttacggaaagcactttcacttaaacctgaccctcaaccctcacctg
gtgtccaaacatttcacggtggagtactgggggagagagggcctggagtggagacatgac
atggtggagaactgccactatgtaggatacctccaggatcagtacagctccaccagagta
gcgctcagtaactgtaagggcttgcacggtgttattacaacagaagaagagcagtattta
atagagccattaaagaatatatcgtccgccacttccagccaatggaaccagggagaagga
cagcagcatgttatttataaaaagtctgcaattccctcgccacagcagcaacccaaccaa
catgagttcagctgtggcatctcagacctcacaaaaagcgtgatcccctgccaacatagc
actccttccccaacctctccaacctcctcctctccctcctcctctcccaccccagcccct
gggtccaacagcaccctgcccggggggggccacagacaaaggcggtcactcagcacggaa
cgcttcgtagagaccctggtggtagctgataagatgatggttggttaccatggacgcaaa
gatatcgagcattatatcctgtctgtgatgaatattgttgccaaactttaccgtgatgcc
agcctaggaaacgttgtgaacattatagtaacccgcttgatcgtactgactgaggaccag
cccaacctggagatcaaccaccatgcagacaagtctctagacagcttctgtaagtggcag
aagtccatcctcagtcaccaaggagacgggaacagcatcccggagaatggcatggctcac
catgacaatgctgtcctcatcacacggtacgacatctgcacttacaagaacaaaccctgt
ggaactctaggcttggcgtcagtagctggaatgtgtgagccggagaggagttgcagcatc
aatgaagacatcggcctgggttctgctttcaccatcgctcacgagattggccacaatttc
gggatgaaccatgatggaataggaaactcatgtgggactaaaggccatgaggcagccaag
ctgatggcggcccacatcacagctaacaccaaccccttctcctggtcggcctgcagtaag
gactacatcaccagcttcctcgactcaggtcgggggacgtgtctggacaatgaacctctg
aaacgagacttcctgtacccaacagtggccccggggcaggtgtacgacgcagatgagcag
tgtcgcttccagtatggagcctcctcacgacagtgcaaatatggggaagtgtgtagagag
ctctggtgccttagcaaaagcaaccgctgtgtcaccaacagtatacctgctgctgagggg
accctgtgtcagactggcagcattgagaaagggtggtgctaccagggggagtgtgtgata
tttgggacgtggccccagagtatggacggaggctggggtccctggtcgtcatggggggag
tgcagcaggacctgcggagggggagtctcttcctccatgagacattgtgacagcccagcg
ccttctggaggagggaagtactgtctcggagagaggaagcgttacagatcgtgtaacaca
gacgcatgtccatcgggatcccgggatttccgggagaagcagtgtgccgacttcgacagc
atgccgttccgtgggaaatactacaactggaagccctacactggaggtggtgtgaagccg
tgtgctctgaactgtctggcagagggatataacttctacaccgagcgctccccggccgtc
atcgatggaacacgctgccaggccgactcactggacatctgcatcaatggagagtgcaag
cacgtaggctgtgacaacatcctgggttcggacgccaaggaggaccgctgtcgggtgtgt
ggaggggacggcagcagctgtgaggccacagagggactgttcaatgactctctacccaga
ggaggctacatggaggtggttcagataccaaggggatcagtccacatagaaatcaaagaa
attgccatgtccaaaaactacattgcgttgaagtcggagggagatgactactacatcaac
ggagcgtggaccatcgactggcccaggaagtttgacatcgcagggacggcgtttcactac
aagagaccccttgacgaacctgagtcactagaggccctgggggccaccacggaaaaccta
gtcgtcatggttcttctccaggaacagaacatggggatccgttataagttcaatgttccc
atccagagaacaggaagtggggacaacgaggtgggcttctcctggcaccatctggcctgg
tccgactgctccgccacctgcgctggaggttcccagaagcaggaagtgttgtgtaagcgt
ctggatgataactcggtggtgcagaacagctactgtgacccagacaacaaacctccagag
aaccagaggtcctgcaacactgaaccgtgccccccagagtggtttattggggactggtcg
gactgtgggaagacatgtgatggcgggatgcggactcggacggttctgtgtatcaggaag
atggggcctgctgaggaggagaccctggaggacagccactgtctgacgcaccgacctata
gaacgagaggcctgcaataaccagtcctgtccccctcggtgggtcactctggattggtca
gagtgtacgcccaaatgtggccctgggttcaagcaccgcatcgtgctgtgtaagagcaac
gacctgaccaagactttccccccagcccactgtcccccccacaataagccccccgtcagg
atccgctgcagtctgggacgctgtccgccacctagatggatcccaggggaatggggacag
tgttcagcgcagtgtgggctgggccagcagatgcggacggtgcagtgtctctcctacacg
ggcaagccctccagtgagtgtaccgagggcctcagacccaccgccatgcagcagtgtgag
agcaagtgtgacgccgtgcccatcgccaacggtgacgaatgtaaagatgtaaacaaagtg
gcatattgcccactggtgctgaagttcaagttctgtggccgcgcgtacttcagacagatg
tgctgcaagacgtgccaaggacgctga
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