Coregonus clupeaformis (lake whitefish): 121582793
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Entry
121582793 CDS
T08357
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121582793
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121582793
Enzymes [BR:
cclu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121582793
Spliceosome [BR:
cclu03041
]
Complex C
Other components
PPlases
121582793
Chaperones and folding catalysts [BR:
cclu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121582793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_EML
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_2nd
NBCH_WD40
WD40_Gbeta
Beta-prop_Vps41
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
121582793
NCBI-ProteinID:
XP_041754826
LinkDB
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Position
15:47609886..47619898
Genome browser
AA seq
627 aa
AA seq
DB search
MASTTENLDLKRKLDENESEGGDGEKEEEWVGPMPSEATQTKKRKVLEYERVYLDNLPSS
AMYERSYMHRDVITHIVCSKTDFIITASQDGHVKFWKKKEDEGVEFVKHFRSHLGVMECI
SVSADGALFCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAICCVACSEKS
TGKIFVYDGRGSNEKLHTFDKIHSSPLSQIRLNPRYRVIVSADKAGMLEYWTGLPSEFKF
PRHVDWEYKTDTDLYEFAKNKTYPTSLAFSHDGRKMATIATDRKVRIFRFLTGKLMRVFD
ESLSMFTELQQMKQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIK
VINVETNRCVRILGKLENIRVVKLSLFQGVAKACNTAPTIEMKASDNPALQSTKPDPTIF
CTAFKKNRFYMFSKREPEDTKSAESDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTT
MGDIHIKLFPVECPKTVENFCVHSRNGYFNGHIFHRVIKGFMIQTGDPTGTGMGGESIWG
GEFEDEFHATLRHDRPYTLSMANGGPGTNGSQFFITVVPTPWLDNKHTVFGRSAKGMEVV
QRISNIKVNPKTDKPYEDISIINITIK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccacagaaaacttagatttgaaacgaaaactagacgagaatgagagtgaa
ggaggagatggagaaaaggaggaggaatgggttggacccatgccaagcgaggcgacacag
accaagaagagaaaagtgctggagtatgaacgtgtgtatttggacaacttgccatcatca
gccatgtacgagaggagctacatgcatagggatgttataacgcacattgtctgttccaag
acagatttcatcattacagccagtcaggatggccatgtgaagttctggaaaaagaaagaa
gatgagggggtagagtttgtcaaacacttccgcagtcatctgggagtgatggagtgtatt
tctgtcagtgctgatggagctctattctgttctgttggggacgaccaggccatgaaagtc
tttgatgtggtcaattttgacatgatcaacatgctcaagctgggtttccacccgggccag
tgtgagtggatctacaacccaggcgatgccatctgctgcgtggcctgctcagagaaatcc
accgggaagatctttgtctacgacggacggggaagcaacgagaagctccatacctttgac
aagatacactcctctccgctgtcccagatccgcctcaaccccagatacagggtcatcgtc
tctgcagacaaggctggaatgctggagtattggaccggcctccccagcgagttcaaattc
ccccggcacgtggactgggagtataagactgacacagacttgtatgagtttgccaaaaac
aaaacctacccaaccagcctggccttctcccacgacggtaggaagatggctactattgcc
accgacaggaaagtcaggatcttccgcttcctgacagggaaactgatgagggtatttgat
gagtcgttatcgatgttcacagagctgcagcagatgaagcagcagctgccagacatggag
tttggtcggaggatggcggtagagagggaactggagaaggtggacggcattaggctcacc
aacatcatctttgacgagaccggtcacttcgtcctctacggaaccatgctgggcatcaag
gtcatcaatgtggagaccaacaggtgtgtgcgtatcctggggaagctggagaacatccgt
gtggtgaagcttagcctgttccagggggttgccaaggcatgcaacacagctcccaccatc
gagatgaaggcatcagacaacccggccctgcagagcacaaagccagaccccaccatcttc
tgcactgccttcaagaagaaccgcttctacatgttctccaagagagagccggaggacaca
aagagtgccgagtcagacagagatgtgttcaacgagaagccgtctaaggaggaggtgatg
gctgctacccaggccgagggtccaaagagggtgtcagacagcgccatcatccacaccacc
atgggagacatccacatcaaactcttccctgtcgagtgtcccaaaacggtggagaacttc
tgtgttcacagcaggaacggttatttcaatggccacatattccaccgcgtcatcaagggc
ttcatgatccagacaggggatcctacagggacgggcatgggaggggagagtatctgggga
ggggagtttgaggatgagttccatgccacactgagacacgaccggccctacaccctcagt
atggccaacggaggccccggaaccaacggatcacagttcttcatcactgtcgttcccacg
ccctggctggacaacaagcacacagtgtttggcaggagtgccaagggaatggaggtagtt
cagaggatctccaacatcaaagtcaaccctaaaacagacaaaccttacgaagacatcagc
atcattaacatcaccatcaagtaa
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