Coregonus clupeaformis (lake whitefish): 121582801
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Entry
121582801 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2 isoform X1
KO
K10634
E3 ubiquitin-protein ligase Praja2 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121582801
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121582801
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121582801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121582801
NCBI-ProteinID:
XP_041754837
LinkDB
All DBs
Position
15:complement(48042438..48062108)
Genome browser
AA seq
692 aa
AA seq
DB search
MGQETGKPAWPKPAGGYQTITGRRYGRRHAYVSFRPTSAKHRNPASVEDWPDTEMDGVHR
AHSIPSKGNISSMLHAIFPVSSNSVHPEVKSKSGKDPPHKKQSTSRKSSEAHTVHYKKRK
SDQPVGCDQDQNVLKKSAEASAWPIPEDEDSNPSNSSVLSFVNIDAYEPDSSGGEEEEEE
EGQGSDLPHGLQKRLDDMIFELGKEFDYLSGLHSYLYTQSCEGTDCSLRDTELVKYSRTD
PRSDSNTEEPPPERNISEHNGTDHMENSTEDHHTPDDLAAGGSTIGPKGPAELGNDNQRG
TQSEMVVRPKIRKQTSETHPEKRKSSHREEANCGLAKQSSKTKCVSAPPFFLTQTERPNQ
EILFDFPQTESNRFSPIERWCEHGEAGSKMNSVDEKDIWEDLEDFNETCAPFMKAEESSE
CSEVEWSALWTSDSGLDKEHHSSQKSWETLPGLDELHSINSSSLEDVPELSLPPAEPTPL
EEGEIPWLMYNEETGSSSDEDPDGMSHFVHPGLFILDGNNNLEDDSSMSEDLDAEWRLLD
DFGEGFGMAQAISYVDPQLLTYMALEERLAQAMEAALAHLESLSIDVEQAHPPATEQIIE
CLPQITILEDHSGQEQCCAICCCEYVKDEIATQLPCHHMFHKMCVTLWLQKSGTCPVCRQ
VLLPVVTETPAPTSFVSDQYIPPSNHSAAGTR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaactggcaagccagcctggcccaaaccagctggtggatatcagacaata
acaggaaggagatacggcaggaggcatgcatacgttagcttccgcccaacctctgccaag
cacaggaacccagccagtgtggaggattggccagatacggaaatggacggtgtccataga
gcgcattccataccttcaaaagggaacatctcctcgatgcttcatgccatctttcctgtg
tcatcgaattcggttcacccagaggtaaaatccaaatctggcaaagatcctccccacaag
aaacagtcaacttctaggaagtcatcggaagcccacaccgttcattacaagaaacgaaag
agtgaccaacctgtaggctgtgaccaggaccaaaatgtattgaagaaaagtgctgaagcc
agtgcatggcctatccccgaggacgaggacagtaacccttctaattctagcgtattgagt
tttgtaaatattgatgcttatgagccggacagtagtggaggcgaggaggaggaggaggag
gaggggcagggctccgacctgcctcacggtctccagaaaagactggatgacatgatcttc
gagctgggtaaagagtttgactatctcagcggtttgcactcatatttgtacacacaatcg
tgtgaaggaacagactgttccctcagagacactgagttggtgaaatattctagaacagat
cctagatcagattcaaacactgaggaaccccctcctgagaggaatatatcagaacacaac
ggaacagatcacatggaaaacagcactgaggaccaccatacaccagatgacctagcagcc
ggtggctctaccatcggtcccaaaggtcctgctgagctggggaacgacaaccagagaggg
acccagtcagagatggtggtgaggcccaaaattcgtaagcagacgagtgaaacgcacccg
gagaagaggaagagttctcaccgcgaggaggcgaactgtggcttagccaaacagtccagc
aagaccaagtgtgtgtctgcaccgccgttctttctgacgcaaacagaaaggccaaaccag
gagatcctctttgattttcctcagactgagtcgaataggtttagccctatagagaggtgg
tgtgaacatggagaggctggtagcaaaatgaattcagttgatgaaaaggatatctgggaa
gatctggaggacttcaatgagacgtgtgctcctttcatgaaggctgaggaaagctctgag
tgcagcgaggtggagtggtcggccttgtggacgtcggactctggcctggataaggagcat
cactccagtcagaaaagctgggagactctgcccggcctggacgagctgcacagcatcaac
agcagcagcctggaggacgtacccgagctcagcctgccccctgcggagcctacccctctg
gaggagggggagattccttggttgatgtacaatgaggagacgggcagtagtagtgacgaa
gacccagatggcatgagtcactttgtccacccgggcctcttcatcctggacggcaacaac
aacctggaggatgactctagcatgagcgaggacctggatgctgagtggaggttgcttgat
gactttggagagggctttgggatggcccaggctatttcctatgtggatcctcagctcctc
acatacatggctcttgaagagcgccttgcccaagctatggaggcggctttagcccacctg
gagtctctgtccatcgacgtggagcaggctcaccctcctgctacagaacagatcatcgag
tgtctgcctcagatcaccatattggaggaccacagtgggcaggaacagtgctgtgccatc
tgctgttgtgagtacgtcaaagatgagattgcaacccagctgccatgccaccacatgttc
cacaagatgtgcgtgactctctggctccagaagtctgggacttgccctgtctgtcgtcaa
gtcctgttgcctgttgtcacggagacccctgcacccacctcgtttgtgtcggatcaatac
atccctccgtccaatcacagcgcagccggaacgcggtga
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