Coregonus clupeaformis (lake whitefish): 121582826
Help
Entry
121582826 CDS
T08357
Name
(RefSeq) visual system homeobox 1-like isoform X1
KO
K09335
visual system homeobox protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121582826
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121582826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121582826
NCBI-ProteinID:
XP_041754887
LinkDB
All DBs
Position
1:49577138..49579751
Genome browser
AA seq
350 aa
AA seq
DB search
MTTMTGREDGAEEKPKVKMLAPAFGIDKSRLHGSGFRSKGFAITDLLGLDTDLQPRPSGL
YGVGGHGDVQSAGMGFPFAGGSLPLGLGFLCSLAAQQPPGAPCFLPSHIPLLQSRAESHF
MQNLEQQRDAYSDEECLSGERNDSKNSGNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYP
DVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLP
ESIINSAKSGMMGSCAPWLLGEPAGMHKKSMEIVKKSPGTPESTHSDTYSEETKGKDSDM
SWPNRSRVIDTEDMAIDLSSTSKQDSSKSTLKSSSPHRDPIRNSDSDDES
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgacaggaagagaggatggcgctgaggagaagcccaaagtcaagatgctg
gctccagcatttgggatcgataaatcacgacttcatggatctgggtttaggtctaaaggc
tttgccatcacggacctactgggtcttgatacggatctccagcctcgcccatccggactt
tatggagtaggaggacacggggatgttcagagcgctgggatgggattccctttcgctgga
ggatccttgccgcttggtctgggtttcctgtgcagtttggcggctcagcaacctccgggg
gccccctgcttcctaccgagtcacatacccctccttcagtccagggcagagagccatttc
atgcagaatttggagcaacaaagagacgcctactctgatgaagaatgtctctctggtgaa
cgaaacgattcgaaaaactccggaaactcccagaagagaaagaaaaggaggcacagaact
gtgttcacgtctcatcaactggaggaactcgaaaaggcattccatgaagcacattaccca
gacgtgtatgccagggaaatgttagcaatgaagacagaattgcctgaggacagaatacag
gtatggtttcagaatcgtcgggccaagtggaggaaacgtgagaagtgctggggacgcagc
agtgttatggcagagtatgggctctacggtgccatggtccgccactccatccctctgcca
gaatcaatcatcaactccgccaaaagcgggatgatgggctcctgtgctccctggcttcta
ggtgagccagcaggaatgcacaagaagtccatggagatagtaaagaaatccccaggaacg
ccagagtctacccactcggatacttactccgaggaaactaaagggaaagacagcgacatg
tcctggccaaaccgctctcgtgttatagacactgaggacatggcaatagacctttccagc
acctctaagcaggacagcagcaagagcactttgaaatcatcgtcgccccatagggatccc
attcgcaacagtgattcagacgatgaaagctaa
DBGET
integrated database retrieval system
