Coregonus clupeaformis (lake whitefish): 121582830
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Entry
121582830 CDS
T08357
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121582830
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
121582830
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
ConA_2nd_BAM2
Laminin_G_3
F5_F8_type_C_2
EGF
SMAGP
CatAgl_D1
PMP1_2
Motif
Other DBs
NCBI-GeneID:
121582830
NCBI-ProteinID:
XP_041754892
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All DBs
Position
15:complement(49385502..49634815)
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AA seq
1326 aa
AA seq
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MDLGTRRHTGMLLQLAVLLCCSNGAIGKDSCDRPLVSNLPQSSFRSSSQLSNSHGPGFAK
VNRRDGAGGWAPVESNKYQWLEVDLGERTEITAVATQGRYGSSDWVSSFLLMFSDTGRNW
KQYRQEDSIGAFTGNSNADSVVQFKLQQPFFARFLRLLPLDWNPNGRIGLRLEAYGCPYK
SDVANFDGSGCLLYRFSPNPTPILTAKDTISLKFKTLQNSGTLIHTEGQHDRSLTLELHK
GKLLLHLRKGKSASPGPESHTVVSLGSLLDDLQWHHVAIERVSGHVNFTVDRSTQQIQVP
AELSPFEINEISFGGIQCHGTQTVLSRRNFHGCLENLLWNEVNVNDLAKQQQKVSIMGNV
TFTCAEPVSVPVTFAGAQCFLQLPGAALLQRDAGGGGVALVAVGVVISLQFRTWNRAGLL
LTFDLQQQVGSLWLYLSEARVRLQIHKAGRILVDVATGFGLNDGQWHSVDLTARRGRLTI
TVDKEESSTAYASPSFPVVSGNNLFFGGCPDSKNNQECRNPFNVFQGCMRHIHVDNNAVD
LIKVQQMVIGNYSDLQIDMCGIIDRCSPSHCEHGGKCTQSWSTFHCNCSNTGYSGATCHS
SIYEQSCEVYKHNGNTSGLYYIDVDGSGPIKPQLIYCNMTDKTWMVIQHNNTELTKLKAS
SRINQHLAYFNYSADEEQLGAIITQAEHCEQEVFYHCRKSRLLNTPDGSPFTWWVGRTDE
PQTYWGGAVPGSQQCGCGLQGNCIDSDHYCNCDADHKEWAADSGLLTHKENLPVRWVVVG
DIQRPESEAAYRVSPLRCHGDKNFWNAAFFNKETSYLHFPTFHGELSADISFLFKTTTSS
GVFLENLGIKDFIRVELSSPMEVVFSFDVGNGPFEVHVETGGVALNDDRWHRVRAERNVK
EASLRVDAFPGATQKAPADGHIHLQLNSQLFVGGTASRMKGFLGCIRSLQLNGRTLDLEE
RAKITPGVRPGCPGHCSSYRQLCQNQARCVERYNGFSCDCGLSAYAGPFCQREVSAYFKP
GTSVQYTFKEPYELTRNTSTQSQSSSIYSDLTPRGENVSFSFRTTQSPALLLYVSSYYRE
YLAVLLNRNGYLDVKYKLQNSRDAEVIRTSIRNLANGQLHRVSIRRISETVSVQIDQHGR
EDFNLTSDAEFNTIKSVVLGKVQESGELDPEIARLNSLGFSGCLSVVQFNSIAPLKAALL
YPNTSPVIVTGPLAESTCGSSSPANPYPAKTTHPLSDHSGTVGTGEPIVNAIKSDSGLIG
GVIAMVIFVILCALAIMARFLYRRKEMFHSQEPKSIKPEADSPEYPFHSKPTSQNELSEN
KKEYFI
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggatttggggaccagaagacacactggaatgcttttacagctagccgtccttctctgc
tgttcaaatggggcaattggaaaagacagctgtgatcgcccactggtgtccaacctgccc
cagtcctccttcagaagctcatcccagttgtccaacagccatgggcccggctttgcaaaa
gtcaacaggagagatggtgccgggggctgggctcctgtagagtctaataagtaccaatgg
ttagaggtggacctgggggagcggacagagatcacggccgtggccacgcagggtcgctac
ggcagttcagactgggtctcctccttcctcctcatgttcagcgacacgggacgaaactgg
aaacagtaccgccaggaggacagcatcggggcgttcactgggaacagcaatgcagacagt
gtggtgcagttcaaactgcagcagccattctttgccaggttcctgcggttacttcctctg
gactggaaccctaacgggaggataggcctgaggctggaggcctatggatgcccttacaag
tctgatgtggcaaattttgacggcagcggctgcttgctctacaggttcagccccaaccca
acaccaattctaacagccaaagacactatctctctgaagttcaaaaccctgcagaactct
gggacactgatacacacagagggacaacacgatcgcagcctcacgctggagttacacaaa
ggaaaacttttactccacctcagaaaaggtaaaagtgcctctcctggtcctgagagccac
acggtcgtatcactgggtagtcttctagatgacctgcaatggcaccacgtagccatcgag
cgcgttagcggccatgtcaacttcactgtggatagaagcactcagcagatccaggtccct
gcagaactcagtccttttgagataaacgagataagctttggtggcatccagtgccatggc
acacagacggttctgtccaggaggaacttccatgggtgtcttgagaaccttctctggaac
gaggtgaacgtgaatgatctggccaagcagcagcagaaggtctccatcatgggcaatgtg
acctttacttgtgctgagccagtctccgtccctgtgacgttcgctggagcccagtgtttc
ctccagttgccgggtgcagcgctactgcagagagatgccggtggcggcggggttgccttg
gtggcagttggtgtggtgatcagcctgcagttccggacctggaacagagcgggccttctg
ttaacctttgacctccaacagcaggtggggagcctgtggctctacctgagcgaggccaga
gtcaggctgcagatacacaaggctggcaggatcctagtggacgttgccacagggtttggt
ctgaacgacggccagtggcattcagtagacctgactgcaaggcgaggtcgtctgaccatc
actgtggataaagaggaaagctccacggcttatgccagcccatctttccccgtggtatca
ggaaacaacctcttctttggaggttgcccggacagcaagaataaccaggagtgcagaaac
cctttcaacgtgttccaaggctgtatgagacacatccatgtggataataatgctgtggac
ctgatcaaggtgcaacagatggtgataggaaactacagcgacctgcagattgacatgtgt
ggaatcatcgacagatgctctccaagccattgtgaacacggggggaaatgcactcagtct
tggagtaccttccattgcaactgctctaacacaggctacagtggagcaacatgtcacagc
tccatctatgagcagtcgtgcgaagtgtacaaacacaacggcaacacatcagggctgtat
tacatagacgtggatggaagcggcccgatcaagccacagctgatttactgcaacatgaca
gataaaacatggatggtgatccaacacaataacacggagctaaccaaattaaaggcctcc
tctcggataaatcagcatttagcctattttaactattcggccgatgaagaacagctcggg
gccataattacccaggcagagcactgcgagcaggaagtcttctaccactgtagaaagtca
cgcctcttaaacacaccagatggatctccgttcacatggtgggtgggtcgtacagacgag
ccccagacgtactggggcggggcagtaccagggagccagcagtgtggctgcggtcttcag
ggtaactgtatcgactcagaccactactgcaattgtgatgctgaccacaaagaatgggct
gctgactctggcctgctcacccataaggagaatctaccagtcagatgggtggtggtgggg
gatatacagagacctgaatcagaggcagcctatagagtcagcccacttaggtgtcatggc
gacaagaacttctggaacgcagcgttcttcaacaaagagacatcgtacctgcacttcccc
acgttccacggagagctcagtgcagacatctccttcctgttcaaaaccaccacctcttca
ggggtcttcctggaaaacctgggcattaaagacttcatacgggttgaactcagctcaccg
atggaggtggtcttctcgtttgacgtgggcaatggcccctttgaggtgcatgtggagacg
ggcggcgtggcgctaaatgacgacaggtggcaccgcgttcgagcagagcggaacgtgaaa
gaggcttcgctgcgtgtggacgctttcccgggcgccacacagaaggcccccgccgacggt
cacatccatctacagctcaacagccaattatttgtaggtggcactgcttccagaatgaaa
ggtttcctggggtgtatccgctcgctgcagctgaacgggaggactctggacctggaggag
agggctaagatcacacctggggtgaggccgggctgcccgggacactgcagcagctacagg
cagctgtgccagaaccaggcgaggtgtgtggagaggtacaatggcttctcctgcgactgt
ggcctctccgcctacgcaggccccttctgccagagagaggtctccgcttacttcaaaccc
gggacatcggtccagtacacattcaaggagccgtacgagctgactagaaacaccagcacc
cagtcccagtcctcctccatctactctgatctgacgcctcgaggagagaatgtctcgttt
agctttagaaccacacagagccctgcgttactgctctacgtcagctcctactacagagag
tacctggctgtgctgctcaacaggaatggttacctggatgttaaatacaagctgcagaac
agtagagatgctgaggtgatcaggaccagcattaggaacttggccaacggacaacttcac
agagtctccatcaggaggatatcagagactgtcagtgttcagattgaccagcacggaagg
gaagacttcaatctcacatctgatgcagaattcaacactatcaagtcagttgtcctgggg
aaagtgcaagagtctggtgagctggatccagagattgccaggctgaactccctgggtttc
agtggctgtctgtcggtggtccagtttaactccatcgctccactgaaagcagcgctactc
tacccaaacaccagcccagtcatagtgacaggacccctagctgagtccacctgtggttcc
tcatctccagccaatccctacccagccaaaaccacacaccccctatcagatcattcaggt
acagtaggtactggtgagcctatagttaatgcaatcaagagtgactctggattgattgga
ggtgtgattgccatggtgatatttgtgattctgtgtgcgttggcaataatggcaaggttc
ctgtatcgacggaaagagatgttccacagccaagaacccaaaagcatcaaacctgaggca
gacagtcctgaataccctttccacagcaagcccacctcacagaacgaactaagtgaaaac
aaaaaggagtatttcatatag
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