Coregonus clupeaformis (lake whitefish): 121582833
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Entry
121582833 CDS
T08357
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121582833
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121582833
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
121582833
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
121582833
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121582833
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GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
121582833
NCBI-ProteinID:
XP_041754901
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Position
15:50152199..50201331
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AA seq
564 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGLRVGAAGGTGA
AQSGPPGWEGYQAMLVEREEQHKLHMASLKKQIAQLKEALQERSEQLKGVQDTMERAAGR
GQGSQSPGGGTLGEGGQGPGADRSHADLQEFLRSQLGRAEVHQGTRLPNEYTVVPFESFT
LQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALRSLNTPRDGADKGRTTKVYSPSDF
IEGISRTEKDKGTLYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVPINIIVPL
SQRADKFRHFMHNFREVCVRQDGRVHLTVVYFGKDQMNEVRSTLENMSREINFKNFSLLQ
LNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNTQPGKKVFYPVLFSQ
YNPTLIYGNHDHIPPVEQQLAIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGE
DVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQLGM
LFFRHEIEAHLRKQKHQRPVAKKT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgtgctgctggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactctgaggacaacctg
gtgagccatgccctgccacgccccgggctgagagtcggggcagcagggggcacaggggcg
gctcagagcggacccccggggtgggagggctaccaggccatgctagtggagcgtgaggag
cagcacaagctacatatggcgagtctgaagaaacagatcgcccagttaaaagaagcactg
caggagcgtagtgagcagctcaaaggagtccaagacacaatggagcgggcggcagggaga
ggccagggcagccagtccccaggaggaggtactctcggggaggggggccaggggccaggg
gctgacaggagccacgcagacctccaggagttccttcgcagtcagctgggccgggcggag
gtccaccagggtactagactacccaatgagtacaccgtggtgccctttgagagcttcacc
ctgcagagggtgtaccagctggagatgggcctgacaaggcaccctgaggagaagcccgtg
aggaaggaccggagggatgagctgagtgaagcgctggagacagccctgcggagcctcaac
acaccccgagacggagcagacaaaggccggaccaccaaggtctactcaccatcagacttc
atagaaggtatctctcggacggagaaggacaaaggtactctgtatgagctcaccttcaaa
ggggaccagagccgtgagttcaggaagctggttctgtttcgtccctttgggccgctaatg
aaggtgaagaacgagagggtggatacagctaatgtccccatcaacatcatagtgcccctc
tcccagagggccgacaagttcagacacttcatgcacaacttcagagaggtgtgtgtgcgg
caggatgggcgagttcacctcacagtggtgtactttgggaaggaccagatgaatgaagtc
aggagcactctggagaacatgtctagggagatcaactttaagaacttctccctgctccag
ctgaatgaggagttctccagggggcgtggcctggatgtgggcgccagggcgtggaaggga
ggaaacgtcctcctcttcttctgtgacgtcgacatctactttaccgccgacttcctgaac
acctgccgtctcaacactcaacctggtaagaaggtcttctatcccgttctgttcagccag
tataacccaaccctgatctacggcaatcacgaccacatcccgccagtcgaacagcagctg
gcgatcaaaaaagacacaggattctggagagactttggcttcggaatgacgtgccagtac
agatcagatttcatcaacataggtggtttcgacgtggacatcaaaggttggggtggtgag
gacgttcacctttacaggaagtacctgcacagcaacctgctggtggtgcggtccccatcg
cggggcctcttccacctgtggcacgagaagcgctgtgctgatgagctgcccccggagcag
tacaggatgtgcatgcagtccaaggccatgaacgaagcctcacacggccagctgggcatg
ctcttcttccgacacgagatcgaggcacacctgcgcaagcagaaacaccagcggcccgtt
gccaagaagacatga
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