Coregonus clupeaformis (lake whitefish): 121582857
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Entry
121582857 CDS
T08357
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121582857
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121582857
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Ig_mannosidase
Motif
Other DBs
NCBI-GeneID:
121582857
NCBI-ProteinID:
XP_041754930
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All DBs
Position
15:51155983..51298602
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AA seq
1092 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRLGDDTPGSSTNNGSDDEKTGLKVISEEGVS
FKIVGNGSEQQLQKELEDVLMDPSVAEQALGGGRGDQAGRVDHVLFPTMAAPPERQPCPD
PLSDPLSTPPKVEMMLPVQSAAQESELNERSYRGDESSSECSPSTPIPDEDSVVFNKLTY
LGCASVNAPRSEVEALRMMTILRGQCQLPLDVTLSVPGVSEGTVRLLDPQTSTEIASYPI
YKILFCVRGHDSTPESDCFAFTESHYNAEIFRIHVFRCEIQEAVSRILYSFATAFRRSAR
KTLLSGLAPPLTPDSDVFTFTVSLEIKEDDGKGTFSAVAKDKDKNSFKLRPGMDKKIVIY
VQQTSNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQF
QAVNEETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNERLFWPFSKRNYTETY
YLKLRQMERKSNNDTLYEVLSLESESERERKKTTASPNILQSSSHGSMVPSPPEDDEEED
NDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGVPEALRGEVWQ
LLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKA
YSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFFQ
LERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIF
NVALALLKTSREDLLATDFEGALKFFRVPVPKRYRSEENAKKLMELACSIKISQKKLKKY
EKEYHTMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNA
EEKADALNKELLMTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEY
KQICSQLSERLEKQQTANKGELEKIRLKVEGCEKCSILFNKEGRLKAVKKMKEGSEEETD
EEKEALKNQLREMELELAQTKLQLVEAECKIQDLEHTLGLALNEVQAAKKTWFNRTLTSI
KTATGAQGKETT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaagcctcggtggggaaaattagcgtgtcgtccgactcagtgtccaccctg
aacagtgaggactttgtgctggtgtcgcggctgggggacgacaccccaggctcctccact
aataatggtagcgatgacgaaaagacaggactcaaggtgatttctgaggaaggggtcagc
tttaagattgtggggaacggcagtgagcagcagttgcagaaggagctggaggatgttctg
atggacccctctgtagctgagcaggcgctgggtggtggcagaggggaccaggcaggcagg
gtggaccatgttttgttccccaccatggcagcgcctcccgagcgccaaccgtgccctgac
cccctcagcgaccccctcagcaccccgcccaaagttgagatgatgctgcccgtccaatct
gcagcacaggagagtgagctgaatgaacgatcttaccgcggggatgagtcgtcatcggag
tgcagccccagtacgcctatcccagatgaggacagtgtggtgttcaataagctgacctat
ctgggctgtgcctcggtcaacgctccccgcagtgaggtggaggccctccgcatgatgacc
atcctcagagggcagtgccagctacccctggacgtcaccctgtctgtgcctggcgtctca
gagggcaccgtcaggttgctggacccccagacaagcacagagatagccagctaccccatc
tacaagatcctgttctgtgtgcggggtcacgacagcacgccagagagtgactgcttcgcc
ttcacagagagccattacaacgcagagatcttccgcatccatgtcttccgttgtgagatc
caagaggcggtcagcaggatactgtacagcttcgccacggcctttaggcggtccgccagg
aagacgctcctctcgggcttggctccgcccctgacgccagacagcgacgtcttcaccttc
accgtcagtctggagatcaaggaggatgatgggaaagggacttttagtgctgtggcgaaa
gacaaagacaagaacagcttcaagctgcgtccgggaatggacaagaagatcgtcatctac
gtccagcagacgtctaataaggagctggccatcgagaggtgcttcggcctcctgctgagt
ccagggaagaatgtgaagaacagtgacatgcacctgcttgacctggagtcaatggggaag
tcctctgatgggaagtcctacatcatcacagggagctggaatcccaacacacctcagttc
caggctgttaacgaggagacacccaaagataagttcatgtacatgacgacggcggtagac
ctggtgatcactgaggtggaggagcctgttcgtttccttctggagaccagggtcagagtc
tgctctcccaacgagaggctcttctggcccttcagcaaacgcaactacaccgagacctac
tacctgaagctcagacagatggagcgtaagagtaacaacgataccctgtatgaggtgctg
agcctggagagtgagtcagagagggagaggaagaaaacgacagccagccccaacatcctg
cagtcttcctcccacggctccatggtgccatcgcctcccgaggatgatgaggaggaagac
aatgacgagccgttgctgagtggctcaggagacgtgtcaaaggagtgtgctgagaagata
ctggagacctggggagacctgctgtccaaatggcacctgaacctgtcggtgcgtcccaag
cagctcccggcgttggtacgtagtggcgtaccagaggccctcaggggagaggtatggcag
ctcctggccggttgccataacaacgaccaccaggtagaggagtaccgcaccctcatcacc
aaggagtctccccaggacagtgccatcaccagagacattaacaggactttcccagctcac
gactatttcaaggacactggaggagacggccaagactcactctacaagatctgcaaggcc
tactcagtgtatgatgaggagattggctactgccagggacagtctttcctggctgctgtg
ctgctgctgcacatgcctgaggagcaggcctttagtgtcctggtcaagatcatgtttgac
tatggactcagggagctcttcaagcagaactttgaggatttacactgcaagttcttccag
ctggagcgactcatgcaggagtacatcccagacttgtataaccacttcctgaacgtgggt
ctggaggctcatatgtacgcctctcagtggttcctcacgctcttcactgccaagttccct
ctctacatggtgttccacatcatagacctgcttctctgtgagggcatcagtgtgatcttc
aacgtggctctggctctcctgaagacctcgagggaagacctgctggcgacggactttgag
ggggcgctcaagttcttccgagtcccggttcccaaacgctaccgctcagaggagaacgct
aagaaacttatggaactggcctgcagcattaagatcagtcagaagaagctgaagaagtat
gagaaggagtaccacaccatgagagaacagcaggagcagcaggaggctcccattgagaga
tacgagagggagaaccgtcgtctccaggaggctaacatgcgtctggagcaggagaacgat
gacctggcccatgaactggtcagcagcaagatcgccctgcgcaaggacctggacaacgct
gaggagaaagcagacgctctgaacaaggagctgttgatgaccaaacagaagctggtggat
tcagaggatgagaagagacgactagaggaggagtctgcgcagctgaaagagatgtgcaga
cgggagctggacaaatcagagtcagagataaagaagaacggttccatcataggagagtac
aaacagatctgctcccagctcagtgagcgtctggaaaaacagcagacggccaacaaggga
gagctggagaagatccggctgaaagtcgaaggctgtgagaagtgctccatcctgttcaac
aaggagggtcgtctgaaggcagtgaagaagatgaaggagggcagtgaggaagagacggac
gaggagaaggaggctctgaagaaccagctcagagaaatggagctggaactggcccagacc
aaactacagctggtggaggcagagtgcaagatacaggacttggagcacaccctgggtctg
gctctcaacgaggtccaggctgctaagaagacctggttcaacagaaccttaacctccatt
aagaccgcgacgggagcacagggcaaggagaccacctaa
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