Coregonus clupeaformis (lake whitefish): 121582863
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Entry
121582863 CDS
T08357
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121582863
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121582863
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121582863
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121582863
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
O-linked Gal type
121582863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
121582863
NCBI-ProteinID:
XP_041754943
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All DBs
Position
15:51677915..51701788
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AA seq
590 aa
AA seq
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MFLWVLVLGAFVSRTECYFSEEKYQEESKMQPPTIVIAIIARNAAHSLPYYLGALERLNY
PKNRISVWAATDHNADNTTAVLKEWLTVMQKFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKQRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDY
SWPFDDIIVFAFSCRVSKVQMYLCNKVRYGYLNVPAKPHHTIEDDSINFSHLILEAMIEG
PSMAPSKYVSLFPKRRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRLLRLMEEVGMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHINEDYKSHFANRNLQAFSTRPLLVQPAH
YAGDPEWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQSDMLQATYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagaacagaatgttatttttct
gaggaaaaatatcaagaagaatcgaaaatgcagccgccaacgattgttattgcgatcatt
gctcggaacgcggcgcattccttgccatactacctcggagcgttggagaggctgaactat
cccaaaaaccgcatctctgtatgggcagctacagatcacaatgctgacaacactacagct
gttctaaaagaatggctgactgtcatgcaaaagttctatcactatgtggagtggaggccc
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaactcaaacaggctgctctcaacttcgccaagcaacgctgggct
gactacatactgtatgcagacactgacaacatcttgaccaacccagagaccctcaacctc
ctcatagcagagaacaagtctgtggtcgcccccatgttggactcccagggagcctactcc
aactactggtgcggcatcactccacagggttactatcggcgtacagctgagtatttcccc
accagacaccgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacaggcatgaagaagctggccttccatccccctcaccaggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcaaaggtgcag
atgtacctgtgcaacaaggtgaggtatggctacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcaatttcagccatctcatcctggaggccatgattgaaggt
ccctccatggccccctccaaatatgtcagcctcttccccaaacggagagacctcatgggc
tttgatgaggtgtacctgatcaacctgcgtcgccgtcaggaccgtagggacaggatgctg
tactctctcaacgagctggagatagacgtcaaagtggtggacgccatagatggaggagct
ctgaacagcagtgatataaagatccttggagtggacatactacctggttactatgaccca
ttctctcgccgcaccctgaccaaaggagaggttggatgcttcctcagccactattacatc
tggaaggagatggtagaccagcagatggacaaggcgctgatcttcgaggacgacgtgcgt
ttccaggccaacttcaagcggcgcttgctccgtctgatggaggaggtgggcatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccgggtgatgaggaggtg
gtggagaacgtgaggaatctggtggtagcagactattcctactggaccctgtcttacgcc
atctctctccagggggcccagaagctgctcaacgctgaacccctctccaagatgctgccc
gtcgacgagttcctacccatcatgtacgacaaacacatcaatgaggactacaagtctcac
tttgctaaccgtaacctgcaggcgttctccacacgccctctattggtgcaaccagcccac
tacgctggggaccccgagtgggtgagcgacacagagacctccacgctgtgggacgacgac
aacgtacgaacagactggaggggttcccacaaaaccctgaagggggcaccccaatccgac
atgctgcaggccacgtataaggatgagctctag
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